RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 LINC00173Q6ZV60 143 aa10.46□□□□□ -0.73
SNRPA1-202ENST00000394082 Q8IZM0 81 aa10.46□□□□□ -0.73
SNRPA1-202ENST00000394082 Q8N8P6 123 aa10.46□□□□□ -0.73
SNRPA1-202ENST00000394082 PRSS2P07478 247 aa10.45□□□□□ -0.74
SNRPA1-202ENST00000394082 ORMDL2Q53FV1 153 aa10.45□□□□□ -0.74
SNRPA1-202ENST00000394082 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
SNRPA1-202ENST00000394082 SVBPQ8N300 66 aa10.45□□□□□ -0.74
SNRPA1-202ENST00000394082 VCX2Q9H322 139 aa10.45□□□□□ -0.74
SNRPA1-202ENST00000394082 IGIPA6NJ69 53 aa10.44□□□□□ -0.74
SNRPA1-202ENST00000394082 SNAPINO95295 136 aa10.44□□□□□ -0.74
SNRPA1-202ENST00000394082 CKS1BP61024 79 aa10.44□□□□□ -0.74
SNRPA1-202ENST00000394082 SEC11AP67812 179 aa10.44□□□□□ -0.74
SNRPA1-202ENST00000394082 COX19Q49B96 90 aa10.44□□□□□ -0.74
SNRPA1-202ENST00000394082 LBHQ53QV2 105 aaPredicted RBP10.43□□□□□ -0.74
SNRPA1-202ENST00000394082 C6orf226Q5I0X4 101 aa10.43□□□□□ -0.74
SNRPA1-202ENST00000394082 GNB1LQ9BYB4 327 aa10.43□□□□□ -0.74
SNRPA1-202ENST00000394082 TP73-AS1Q9UF72 201 aa10.43□□□□□ -0.74
SNRPA1-202ENST00000394082 G0S2P27469 103 aa10.42□□□□□ -0.74
SNRPA1-202ENST00000394082 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
SNRPA1-202ENST00000394082 C22orf24Q9Y442 160 aa10.42□□□□□ -0.74
SNRPA1-202ENST00000394082 MUC2Q02817 5179 aa10.42□□□□□ -0.74
SNRPA1-202ENST00000394082 HERVK_113P63121 156 aa10.41□□□□□ -0.74
SNRPA1-202ENST00000394082 KIAA1644Q3SXP7 199 aa10.41□□□□□ -0.74
SNRPA1-202ENST00000394082 ALKBH7Q9BT30 221 aaPredicted RBP10.41□□□□□ -0.74
SNRPA1-202ENST00000394082 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
SNRPA1-202ENST00000394082 F8VRH5 84 aa10.4□□□□□ -0.74
SNRPA1-202ENST00000394082 TOMM7Q9P0U1 55 aa10.4□□□□□ -0.74
SNRPA1-202ENST00000394082 CXCL5P42830 114 aa10.39□□□□□ -0.75
SNRPA1-202ENST00000394082 PRR4Q16378 134 aa10.39□□□□□ -0.75
SNRPA1-202ENST00000394082 ZC2HC1BQ5TFG8 222 aa10.39□□□□□ -0.75
SNRPA1-202ENST00000394082 TIMM17AQ99595 171 aa10.38□□□□□ -0.75
SNRPA1-202ENST00000394082 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
SNRPA1-202ENST00000394082 MRPL55Q7Z7F7 128 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-202ENST00000394082 LINC00469Q8N7U9 141 aa10.37□□□□□ -0.75
SNRPA1-202ENST00000394082 MRPL18Q9H0U6 180 aaKnown RBP10.37□□□□□ -0.75
SNRPA1-202ENST00000394082 XAGE1AQ9HD64 81 aa10.37□□□□□ -0.75
SNRPA1-202ENST00000394082 CDKN2A-AS1Q9UH64 79 aa10.37□□□□□ -0.75
SNRPA1-202ENST00000394082 RPL28P46779 137 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-202ENST00000394082 GEMIN7Q9H840 131 aaKnown RBP10.36□□□□□ -0.75
SNRPA1-202ENST00000394082 BCE1O60756 84 aa10.35□□□□□ -0.75
SNRPA1-202ENST00000394082 TOMM6Q96B49 74 aa10.35□□□□□ -0.75
SNRPA1-202ENST00000394082 TRAPPC1Q9Y5R8 145 aa10.34□□□□□ -0.75
SNRPA1-202ENST00000394082 A0A0U1RQV1 116 aa10.33□□□□□ -0.76
SNRPA1-202ENST00000394082 ERASQ7Z444 233 aa10.33□□□□□ -0.76
SNRPA1-202ENST00000394082 LINC01549A6NIU2 74 aa10.32□□□□□ -0.76
SNRPA1-202ENST00000394082 CRYGAP11844 174 aa10.32□□□□□ -0.76
SNRPA1-202ENST00000394082 PDZD11Q5EBL8 140 aa10.32□□□□□ -0.76
SNRPA1-202ENST00000394082 IGLV5-45A0A087WSX0 123 aa10.31□□□□□ -0.76
SNRPA1-202ENST00000394082 A0A087X002 238 aa10.31□□□□□ -0.76
SNRPA1-202ENST00000394082 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
SNRPA1-202ENST00000394082 SMCO4Q9NRQ5 59 aa10.31□□□□□ -0.76
SNRPA1-202ENST00000394082 IGLV5-37A0A075B6J1 123 aa10.3□□□□□ -0.76
SNRPA1-202ENST00000394082 TINCRA0A1B0GVN0 87 aa10.3□□□□□ -0.76
SNRPA1-202ENST00000394082 SMIM1B2RUZ4 78 aa10.3□□□□□ -0.76
SNRPA1-202ENST00000394082 SLC7A5P1Q8MH63 180 aa10.3□□□□□ -0.76
SNRPA1-202ENST00000394082 LINC00167Q96N53 147 aa10.3□□□□□ -0.76
SNRPA1-202ENST00000394082 TYMSOSQ8TAI1 123 aa10.29□□□□□ -0.76
SNRPA1-202ENST00000394082 LINC01546A6NGU7 62 aa10.27□□□□□ -0.77
SNRPA1-202ENST00000394082 TSPAN13O95857 204 aa10.27□□□□□ -0.77
SNRPA1-202ENST00000394082 KRTAP13-1Q8IUC0 172 aa10.27□□□□□ -0.77
SNRPA1-202ENST00000394082 COX7B2Q8TF08 81 aa10.27□□□□□ -0.77
SNRPA1-202ENST00000394082 SCGB3A1Q96QR1 104 aa10.27□□□□□ -0.77
SNRPA1-202ENST00000394082 CTAG1AP78358 180 aa10.26□□□□□ -0.77
SNRPA1-202ENST00000394082 RPL37AP8A6NKH3 93 aa10.25□□□□□ -0.77
SNRPA1-202ENST00000394082 FAM229BQ4G0N7 80 aa10.25□□□□□ -0.77
SNRPA1-202ENST00000394082 CBLN2Q8IUK8 224 aa10.25□□□□□ -0.77
SNRPA1-202ENST00000394082 C18orf32Q8TCD1 76 aa10.24□□□□□ -0.77
SNRPA1-202ENST00000394082 YPEL4Q96NS1 127 aa10.24□□□□□ -0.77
SNRPA1-202ENST00000394082 CST9LQ9H4G1 147 aa10.24□□□□□ -0.77
SNRPA1-202ENST00000394082 RAB5BP61020 215 aa10.23□□□□□ -0.77
SNRPA1-202ENST00000394082 LINC00614P0C842 121 aa10.22□□□□□ -0.77
SNRPA1-202ENST00000394082 NKAPP1Q8N9T2 125 aa10.22□□□□□ -0.77
SNRPA1-202ENST00000394082 UBE2AP49459 152 aa10.21□□□□□ -0.77
SNRPA1-202ENST00000394082 PMVKQ15126 192 aa10.21□□□□□ -0.77
SNRPA1-202ENST00000394082 KRTAP13-2Q52LG2 175 aa10.21□□□□□ -0.77
SNRPA1-202ENST00000394082 GAGE10A6NGK3 116 aa10.2□□□□□ -0.78
SNRPA1-202ENST00000394082 ATP5LO75964 103 aa10.2□□□□□ -0.78
SNRPA1-202ENST00000394082 H3BRM9 83 aa10.19□□□□□ -0.78
SNRPA1-202ENST00000394082 HBDP02042 147 aa10.19□□□□□ -0.78
SNRPA1-202ENST00000394082 SPINK8P0C7L1 97 aa10.19□□□□□ -0.78
SNRPA1-202ENST00000394082 LINC00304Q8N9R0 145 aa10.18□□□□□ -0.78
SNRPA1-202ENST00000394082 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
SNRPA1-202ENST00000394082 IGLV5-39A0A0G2JS06 123 aa10.17□□□□□ -0.78
SNRPA1-202ENST00000394082 URB1-AS1Q96HZ7 61 aa10.17□□□□□ -0.78
SNRPA1-202ENST00000394082 COX17Q14061 63 aa10.16□□□□□ -0.78
SNRPA1-202ENST00000394082 TPRXLQ17RH7 258 aa10.16□□□□□ -0.78
SNRPA1-202ENST00000394082 IGLC3P0DOY3 106 aa10.15□□□□□ -0.78
SNRPA1-202ENST00000394082 NDUFA6P56556 154 aa10.15□□□□□ -0.78
SNRPA1-202ENST00000394082 PMCHL1Q16048 86 aa10.15□□□□□ -0.78
SNRPA1-202ENST00000394082 LCE2AQ5TA79 106 aaPredicted RBP10.15□□□□□ -0.78
SNRPA1-202ENST00000394082 CHCHD1Q96BP2 118 aaKnown RBP10.15□□□□□ -0.78
SNRPA1-202ENST00000394082 IGKV2-28A0A075B6P5 120 aa10.14□□□□□ -0.79
SNRPA1-202ENST00000394082 A0A096LNJ9 63 aa10.14□□□□□ -0.79
SNRPA1-202ENST00000394082 IGKV2D-26A0A0A0MRZ7 120 aa10.14□□□□□ -0.79
SNRPA1-202ENST00000394082 IGKV2D-28P01615 120 aa10.14□□□□□ -0.79
SNRPA1-202ENST00000394082 TRGC2P03986 189 aa10.14□□□□□ -0.79
SNRPA1-202ENST00000394082 VPREB1P12018 145 aa10.14□□□□□ -0.79
SNRPA1-202ENST00000394082 FAT4Q6V0I7 4981 aa10.13□□□□□ -0.79
SNRPA1-202ENST00000394082 RPL24P83731 157 aaKnown RBP10.13□□□□□ -0.79
SNRPA1-202ENST00000394082 SFTA2Q6UW10 78 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms