RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 XGP55808 180 aa13.2□□□□□ -0.3
SMARCC2-203ENST00000394023 SPAG11BQ08648 103 aa13.19□□□□□ -0.3
SMARCC2-203ENST00000394023 FAM104AQ969W3 186 aa13.19□□□□□ -0.3
SMARCC2-203ENST00000394023 NCR3O14931 201 aa13.19□□□□□ -0.3
SMARCC2-203ENST00000394023 CCL18P55774 89 aa13.19□□□□□ -0.3
SMARCC2-203ENST00000394023 CSNK1G2-AS1Q8NCQ2 148 aa13.19□□□□□ -0.3
SMARCC2-203ENST00000394023 PLAC8L1A1L4L8 177 aa13.18□□□□□ -0.3
SMARCC2-203ENST00000394023 SOSTDC1Q6X4U4 206 aa13.18□□□□□ -0.3
SMARCC2-203ENST00000394023 NIPBLQ6KC79 2804 aaeCLIP13.18□□□□□ -0.36e-7■■■□□ 15
SMARCC2-203ENST00000394023 IBA57-AS1B1ANH7 110 aa13.18□□□□□ -0.3
SMARCC2-203ENST00000394023 SPATA25Q9BR10 227 aa13.18□□□□□ -0.3
SMARCC2-203ENST00000394023 RETNQ9HD89 108 aa13.18□□□□□ -0.3
SMARCC2-203ENST00000394023 IGLV5-45A0A087WSX0 123 aa13.18□□□□□ -0.3
SMARCC2-203ENST00000394023 SLPIP03973 132 aa13.17□□□□□ -0.3
SMARCC2-203ENST00000394023 ZFHX3Q15911 3703 aa13.17□□□□□ -0.3
SMARCC2-203ENST00000394023 MIFP14174 115 aa13.16□□□□□ -0.3
SMARCC2-203ENST00000394023 C9orf116Q5BN46 136 aaPredicted RBP13.16□□□□□ -0.3
SMARCC2-203ENST00000394023 Q8N3U1 123 aa13.16□□□□□ -0.3
SMARCC2-203ENST00000394023 X6R8D5 127 aa13.16□□□□□ -0.3
SMARCC2-203ENST00000394023 SPATA3Q8NHX4 192 aa13.16□□□□□ -0.3
SMARCC2-203ENST00000394023 A0A087WZ39 114 aa13.16□□□□□ -0.3
SMARCC2-203ENST00000394023 PRR3P79522 188 aaKnown RBP13.16□□□□□ -0.3
SMARCC2-203ENST00000394023 CELA1Q9UNI1 258 aa13.15□□□□□ -0.3
SMARCC2-203ENST00000394023 LAMTOR3Q9UHA4 124 aa13.15□□□□□ -0.3
SMARCC2-203ENST00000394023 IGKV2D-24A0A075B6R9 120 aa13.15□□□□□ -0.3
SMARCC2-203ENST00000394023 INAFM2P0DMQ5 153 aa13.15□□□□□ -0.3
SMARCC2-203ENST00000394023 IGHV3OR16-9A0A0B4J2B5 98 aa13.14□□□□□ -0.31
SMARCC2-203ENST00000394023 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
SMARCC2-203ENST00000394023 NOTCH1P46531 2555 aa13.14□□□□□ -0.31
SMARCC2-203ENST00000394023 HIGD2BQ4VC39 106 aa13.14□□□□□ -0.31
SMARCC2-203ENST00000394023 SBSPONQ8IVN8 264 aa13.13□□□□□ -0.31
SMARCC2-203ENST00000394023 SMIM11BQ8TCY0 68 aa13.13□□□□□ -0.31
SMARCC2-203ENST00000394023 H0YGX0 51 aa13.12□□□□□ -0.31
SMARCC2-203ENST00000394023 PRB2P02812 416 aaPredicted RBP13.12□□□□□ -0.31
SMARCC2-203ENST00000394023 MGAM2Q2M2H8 2515 aa13.12□□□□□ -0.31
SMARCC2-203ENST00000394023 CD164L2Q6UWJ8 174 aa13.12□□□□□ -0.31
SMARCC2-203ENST00000394023 SCGB1A1P11684 91 aa13.11□□□□□ -0.31
SMARCC2-203ENST00000394023 CAMK2N2Q96S95 79 aa13.1□□□□□ -0.31
SMARCC2-203ENST00000394023 XAGE1AQ9HD64 81 aa13.1□□□□□ -0.31
SMARCC2-203ENST00000394023 LINC00337Q8N6G1 96 aa13.1□□□□□ -0.31
SMARCC2-203ENST00000394023 C14orf132Q9NPU4 83 aa13.1□□□□□ -0.31
SMARCC2-203ENST00000394023 STAB1Q9NY15 2570 aa13.09□□□□□ -0.31
SMARCC2-203ENST00000394023 CDIP1Q9H305 208 aa13.09□□□□□ -0.31
SMARCC2-203ENST00000394023 RPL18AQ02543 176 aaKnown RBP13.09□□□□□ -0.31
SMARCC2-203ENST00000394023 TENM4Q6N022 2769 aa13.09□□□□□ -0.31
SMARCC2-203ENST00000394023 ORMDL1Q9P0S3 153 aa13.08□□□□□ -0.32
SMARCC2-203ENST00000394023 C1orf43Q9BWL3 253 aa13.08□□□□□ -0.32
SMARCC2-203ENST00000394023 UNQ6190/PRO20217Q6UXQ8 127 aa13.07□□□□□ -0.32
SMARCC2-203ENST00000394023 HIST1H4AP62805 103 aaKnown RBP13.06□□□□□ -0.32
SMARCC2-203ENST00000394023 CXCL5P42830 114 aa13.06□□□□□ -0.32
SMARCC2-203ENST00000394023 KPRPQ5T749 579 aaPredicted RBP13.06□□□□□ -0.32
SMARCC2-203ENST00000394023 TMEM126AQ9H061 195 aa13.06□□□□□ -0.32
SMARCC2-203ENST00000394023 TRACP01848 142 aa13.05□□□□□ -0.32
SMARCC2-203ENST00000394023 C6orf223Q8N319 242 aa13.05□□□□□ -0.32
SMARCC2-203ENST00000394023 Q8IZM0 81 aa13.05□□□□□ -0.32
SMARCC2-203ENST00000394023 HIVEP1P15822 2718 aa13.05□□□□□ -0.32
SMARCC2-203ENST00000394023 LELP1Q5T871 98 aa13.04□□□□□ -0.32
SMARCC2-203ENST00000394023 COL6A5A8TX70 2615 aa13.04□□□□□ -0.32
SMARCC2-203ENST00000394023 A0A1B0GUV1 79 aa13.04□□□□□ -0.32
SMARCC2-203ENST00000394023 A0A087WYN8 130 aa13.03□□□□□ -0.32
SMARCC2-203ENST00000394023 RNF183Q96D59 192 aa13.02□□□□□ -0.32
SMARCC2-203ENST00000394023 C6orf99Q4VX62 202 aa13.02□□□□□ -0.32
SMARCC2-203ENST00000394023 C11orf45Q8TAV5 145 aa13.02□□□□□ -0.32
SMARCC2-203ENST00000394023 IGKV3D-7A0A0C4DH55 119 aa13.02□□□□□ -0.33
SMARCC2-203ENST00000394023 Q6ZTC4 211 aa13.02□□□□□ -0.33
SMARCC2-203ENST00000394023 DEFB131BA0A096LNP1 70 aa13.01□□□□□ -0.33
SMARCC2-203ENST00000394023 CYSRT1A8MQ03 144 aa13.01□□□□□ -0.33
SMARCC2-203ENST00000394023 NBPF19A0A087WUL8 3843 aa13.01□□□□□ -0.33
SMARCC2-203ENST00000394023 NSD1Q96L73 2696 aaPredicted RBP13.01□□□□□ -0.33
SMARCC2-203ENST00000394023 NANOS2P60321 138 aaKnown RBP13.01□□□□□ -0.33
SMARCC2-203ENST00000394023 FAM218AQ96MZ4 157 aa13□□□□□ -0.33
SMARCC2-203ENST00000394023 RPL28P46779 137 aaKnown RBP12.99□□□□□ -0.33
SMARCC2-203ENST00000394023 B5MCH6 92 aa12.99□□□□□ -0.33
SMARCC2-203ENST00000394023 A0A0J9YWU9 116 aa12.98□□□□□ -0.33
SMARCC2-203ENST00000394023 ACYP1P07311 99 aa12.97□□□□□ -0.33
SMARCC2-203ENST00000394023 FAM236AA0A1B0GUQ0 79 aa12.96□□□□□ -0.33
SMARCC2-203ENST00000394023 FAM236BA0A1B0GV22 79 aa12.96□□□□□ -0.33
SMARCC2-203ENST00000394023 CITED1Q99966 193 aa12.96□□□□□ -0.33
SMARCC2-203ENST00000394023 WFDC10BQ8IUB3 73 aa12.96□□□□□ -0.33
SMARCC2-203ENST00000394023 SHISA2Q6UWI4 295 aa12.96□□□□□ -0.33
SMARCC2-203ENST00000394023 Q8NAQ8 132 aa12.96□□□□□ -0.34
SMARCC2-203ENST00000394023 IGKV2-28A0A075B6P5 120 aa12.95□□□□□ -0.34
SMARCC2-203ENST00000394023 IGKV2D-28P01615 120 aa12.95□□□□□ -0.34
SMARCC2-203ENST00000394023 NKAPP1Q8N9T2 125 aa12.94□□□□□ -0.34
SMARCC2-203ENST00000394023 LYPD5Q6UWN5 251 aa12.93□□□□□ -0.34
SMARCC2-203ENST00000394023 NDUFV3P56181 108 aaKnown RBP12.93□□□□□ -0.34
SMARCC2-203ENST00000394023 NBEAL1Q6ZS30 2694 aa12.93□□□□□ -0.34
SMARCC2-203ENST00000394023 DPH3Q96FX2 82 aa12.93□□□□□ -0.34
SMARCC2-203ENST00000394023 C10orf25Q5T742 122 aa12.92□□□□□ -0.34
SMARCC2-203ENST00000394023 FAM19A3Q7Z5A8 133 aa12.91□□□□□ -0.34
SMARCC2-203ENST00000394023 UBE2DNLQ8IWF7 75 aa12.91□□□□□ -0.34
SMARCC2-203ENST00000394023 HAMPP81172 84 aa12.91□□□□□ -0.34
SMARCC2-203ENST00000394023 DEFB105AQ8NG35 78 aa12.9□□□□□ -0.34
SMARCC2-203ENST00000394023 PSCAO43653 123 aa12.89□□□□□ -0.35
SMARCC2-203ENST00000394023 SDIM1Q6ZPB5 146 aa12.89□□□□□ -0.35
SMARCC2-203ENST00000394023 LINC00643Q86TS7 51 aa12.89□□□□□ -0.35
SMARCC2-203ENST00000394023 DSCR8Q96T75 97 aa12.88□□□□□ -0.35
SMARCC2-203ENST00000394023 M0QXV9 152 aa12.88□□□□□ -0.35
SMARCC2-203ENST00000394023 DIRC1Q969H9 104 aa12.88□□□□□ -0.35
SMARCC2-203ENST00000394023 hADV29S1A0JD25 119 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms