RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 MED13LQ71F56 2210 aa11.52□□□□□ -0.57
SHANK1-204ENST00000391814 Q9BRP9 147 aa11.5□□□□□ -0.57
SHANK1-204ENST00000391814 LY6G6DO95868 133 aa11.5□□□□□ -0.57
SHANK1-204ENST00000391814 C1orf64Q8NEQ6 169 aa11.5□□□□□ -0.57
SHANK1-204ENST00000391814 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
SHANK1-204ENST00000391814 MRGPRG-AS1Q2M3A8 158 aa11.5□□□□□ -0.57
SHANK1-204ENST00000391814 FAM218AQ96MZ4 157 aa11.49□□□□□ -0.57
SHANK1-204ENST00000391814 A0A087WSZ3 146 aa11.49□□□□□ -0.57
SHANK1-204ENST00000391814 EGFEM1PQ0D2K5 195 aa11.49□□□□□ -0.57
SHANK1-204ENST00000391814 COL4A4P53420 1690 aaPredicted RBP11.48□□□□□ -0.57
SHANK1-204ENST00000391814 PTPRSQ13332 1948 aa11.47□□□□□ -0.57
SHANK1-204ENST00000391814 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
SHANK1-204ENST00000391814 Q8N2B8 174 aa11.47□□□□□ -0.57
SHANK1-204ENST00000391814 SPATA3Q8NHX4 192 aa11.47□□□□□ -0.57
SHANK1-204ENST00000391814 FHL2Q14192 279 aa11.46□□□□□ -0.57
SHANK1-204ENST00000391814 MUC6Q6W4X9 2439 aa11.46□□□□□ -0.57
SHANK1-204ENST00000391814 NUPR2A6NF83 97 aa11.46□□□□□ -0.57
SHANK1-204ENST00000391814 WNK1Q9H4A3 2382 aa11.46□□□□□ -0.58
SHANK1-204ENST00000391814 SPAG11AQ6PDA7 123 aa11.46□□□□□ -0.58
SHANK1-204ENST00000391814 FAM208BQ5VWN6 2430 aa11.45□□□□□ -0.58
SHANK1-204ENST00000391814 LRP4O75096 1905 aa11.45□□□□□ -0.58
SHANK1-204ENST00000391814 PRLHP81277 87 aa11.45□□□□□ -0.58
SHANK1-204ENST00000391814 PTPRQQ9UMZ3 2332 aa11.44□□□□□ -0.58
SHANK1-204ENST00000391814 SMCR5Q8TEV8 140 aa11.43□□□□□ -0.58
SHANK1-204ENST00000391814 EXPH5Q8NEV8 1989 aa11.42□□□□□ -0.58
SHANK1-204ENST00000391814 LINC01006Q8NI28 216 aa11.41□□□□□ -0.58
SHANK1-204ENST00000391814 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
SHANK1-204ENST00000391814 A0A1B0GU69 56 aa11.4□□□□□ -0.58
SHANK1-204ENST00000391814 ODF3L2Q3SX64 289 aa11.4□□□□□ -0.58
SHANK1-204ENST00000391814 KIAA0087Q14695 138 aa11.39□□□□□ -0.59
SHANK1-204ENST00000391814 TM2D3Q9BRN9 247 aa11.39□□□□□ -0.59
SHANK1-204ENST00000391814 LINC01561Q8N1V8 128 aa11.39□□□□□ -0.59
SHANK1-204ENST00000391814 LINC00474Q9P2X8 69 aa11.39□□□□□ -0.59
SHANK1-204ENST00000391814 BDP1A6H8Y1 2624 aa11.38□□□□□ -0.59
SHANK1-204ENST00000391814 IGKV2D-30A0A075B6S6 120 aa11.38□□□□□ -0.59
SHANK1-204ENST00000391814 IGKV2-30P06310 120 aa11.38□□□□□ -0.59
SHANK1-204ENST00000391814 FSHBP01225 129 aa11.37□□□□□ -0.59
SHANK1-204ENST00000391814 SMR3AQ99954 134 aa11.37□□□□□ -0.59
SHANK1-204ENST00000391814 BCE1O60756 84 aa11.37□□□□□ -0.59
SHANK1-204ENST00000391814 PLXNB1O43157 2135 aa11.37□□□□□ -0.59
SHANK1-204ENST00000391814 OXLD1Q5BKU9 147 aa11.37□□□□□ -0.59
SHANK1-204ENST00000391814 VPREB1P12018 145 aa11.36□□□□□ -0.59
SHANK1-204ENST00000391814 IGLV5-39A0A0G2JS06 123 aa11.36□□□□□ -0.59
SHANK1-204ENST00000391814 KIF25-AS1Q9Y6Z4 181 aa11.36□□□□□ -0.59
SHANK1-204ENST00000391814 Q6ZQT0 140 aa11.36□□□□□ -0.59
SHANK1-204ENST00000391814 IGLV5-52A0A0A0MRZ9 124 aa11.35□□□□□ -0.59
SHANK1-204ENST00000391814 C7orf65Q6ZTY9 151 aa11.35□□□□□ -0.59
SHANK1-204ENST00000391814 BRI3O95415 125 aa11.34□□□□□ -0.59
SHANK1-204ENST00000391814 FHL3Q13643 280 aa11.34□□□□□ -0.59
SHANK1-204ENST00000391814 Q6ZRU5 148 aa11.33□□□□□ -0.6
SHANK1-204ENST00000391814 TECTAO75443 2155 aa11.33□□□□□ -0.6
SHANK1-204ENST00000391814 Q6ZTC4 211 aa11.32□□□□□ -0.6
SHANK1-204ENST00000391814 IGLV8-61A0A075B6I0 122 aa11.31□□□□□ -0.6
SHANK1-204ENST00000391814 A0A1B0GUV1 79 aa11.31□□□□□ -0.6
SHANK1-204ENST00000391814 SPINT4Q6UDR6 99 aa11.31□□□□□ -0.6
SHANK1-204ENST00000391814 AVPP01185 164 aa11.3□□□□□ -0.6
SHANK1-204ENST00000391814 C8orf87E5RJ46 101 aa11.29□□□□□ -0.6
SHANK1-204ENST00000391814 TET2Q6N021 2002 aaPredicted RBP11.29□□□□□ -0.6
SHANK1-204ENST00000391814 SRCAPQ6ZRS2 3230 aa11.28□□□□□ -0.6
SHANK1-204ENST00000391814 LOC110117498A0A087WWA1 95 aa11.28□□□□□ -0.6
SHANK1-204ENST00000391814 ACYP2P14621 99 aa11.27□□□□□ -0.6
SHANK1-204ENST00000391814 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
SHANK1-204ENST00000391814 OTOGLQ3ZCN5 2332 aa11.27□□□□□ -0.61
SHANK1-204ENST00000391814 CDSNQ15517 529 aa11.26□□□□□ -0.61
SHANK1-204ENST00000391814 LINC00315P59091 139 aa11.26□□□□□ -0.61
SHANK1-204ENST00000391814 C6orf48Q9UBA6 75 aa11.25□□□□□ -0.61
SHANK1-204ENST00000391814 SORL1Q92673 2214 aa11.25□□□□□ -0.61
SHANK1-204ENST00000391814 C22orf24Q9Y442 160 aa11.25□□□□□ -0.61
SHANK1-204ENST00000391814 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
SHANK1-204ENST00000391814 NHLRC4P0CG21 123 aaPredicted RBP11.24□□□□□ -0.61
SHANK1-204ENST00000391814 PRRC2AP48634 2157 aaKnown RBP11.24□□□□□ -0.61
SHANK1-204ENST00000391814 F8WDY8 70 aa11.24□□□□□ -0.61
SHANK1-204ENST00000391814 HIVEP2P31629 2446 aa11.23□□□□□ -0.61
SHANK1-204ENST00000391814 A8MUN3 132 aa11.23□□□□□ -0.61
SHANK1-204ENST00000391814 ADAMTS20P59510 1910 aa11.23□□□□□ -0.61
SHANK1-204ENST00000391814 DSCAMO60469 2012 aa11.23□□□□□ -0.61
SHANK1-204ENST00000391814 ATP11AUNQ6ZP68 121 aa11.22□□□□□ -0.61
SHANK1-204ENST00000391814 NOTCH2Q04721 2471 aa11.22□□□□□ -0.61
SHANK1-204ENST00000391814 RPL37AP61513 92 aaKnown RBP11.22□□□□□ -0.61
SHANK1-204ENST00000391814 C11orf72Q8NBR9 251 aa11.22□□□□□ -0.61
SHANK1-204ENST00000391814 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
SHANK1-204ENST00000391814 LINC00336Q6ZUF6 198 aa11.21□□□□□ -0.62
SHANK1-204ENST00000391814 IGLV5-45A0A087WSX0 123 aa11.2□□□□□ -0.62
SHANK1-204ENST00000391814 IGLV1-51P01701 117 aa11.2□□□□□ -0.62
SHANK1-204ENST00000391814 TTC28Q96AY4 2481 aa11.19□□□□□ -0.62
SHANK1-204ENST00000391814 TP53AIP1Q9HCN2 124 aa11.19□□□□□ -0.62
SHANK1-204ENST00000391814 PRR14LQ5THK1 2151 aa11.19□□□□□ -0.62
SHANK1-204ENST00000391814 IGHV3OR16-9A0A0B4J2B5 98 aa11.18□□□□□ -0.62
SHANK1-204ENST00000391814 SPACA4Q8TDM5 124 aa11.18□□□□□ -0.62
SHANK1-204ENST00000391814 LITAFQ99732 161 aa11.18□□□□□ -0.62
SHANK1-204ENST00000391814 CUL9Q8IWT3 2517 aa11.17□□□□□ -0.62
SHANK1-204ENST00000391814 AGRNO00468 2067 aa11.16□□□□□ -0.62
SHANK1-204ENST00000391814 MDFIQ99750 246 aa11.16□□□□□ -0.62
SHANK1-204ENST00000391814 PTPN13Q12923 2485 aa11.16□□□□□ -0.62
SHANK1-204ENST00000391814 SPG11Q96JI7 2443 aa11.15□□□□□ -0.63
SHANK1-204ENST00000391814 H3BPC8 53 aa11.14□□□□□ -0.63
SHANK1-204ENST00000391814 COA5Q86WW8 74 aa11.14□□□□□ -0.63
SHANK1-204ENST00000391814 SSBP3-AS1Q7Z2R9 100 aa11.13□□□□□ -0.63
SHANK1-204ENST00000391814 LINC00476Q8WZB0 136 aa11.13□□□□□ -0.63
SHANK1-204ENST00000391814 PRO3102Q9H379 93 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms