RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 WFDC13Q8IUB5 93 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 DOPEY1Q5JWR5 2465 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 PRM2P04554 102 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 C14orf177Q52M58 125 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 KIR2DL5BQ8NHK3 375 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 TMEM254Q8TBM7 123 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 CENPFP49454 3210 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 LELP1Q5T871 98 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 FN1P02751 2386 aaKnown RBP14.12□□□□□ -0.15
SHANK1-203ENST00000391813 FAM30AQ9NZY2 134 aa14.12□□□□□ -0.15
SHANK1-203ENST00000391813 BEAN1Q3B7T3 259 aa14.11□□□□□ -0.15
SHANK1-203ENST00000391813 C16orf95Q9H693 158 aa14.11□□□□□ -0.15
SHANK1-203ENST00000391813 CYSRT1A8MQ03 144 aa14.11□□□□□ -0.15
SHANK1-203ENST00000391813 CELA1Q9UNI1 258 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 Q6ZVQ6 151 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 IGKV2-24A0A0C4DH68 120 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 Q8N9L7 120 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 IGLV5-39A0A0G2JS06 123 aa14.09□□□□□ -0.15
SHANK1-203ENST00000391813 IGKV2-28A0A075B6P5 120 aa14.09□□□□□ -0.15
SHANK1-203ENST00000391813 IGKV2D-28P01615 120 aa14.09□□□□□ -0.15
SHANK1-203ENST00000391813 TRBV7-6A0A0J9YX20 115 aa14.08□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00337Q8N6G1 96 aa14.08□□□□□ -0.16
SHANK1-203ENST00000391813 DEFB131BA0A096LNP1 70 aa14.07□□□□□ -0.16
SHANK1-203ENST00000391813 CXCL6P80162 114 aa14.07□□□□□ -0.16
SHANK1-203ENST00000391813 LINC01547P58512 204 aaPredicted RBP14.06□□□□□ -0.16
SHANK1-203ENST00000391813 TET2Q6N021 2002 aaPredicted RBP14.06□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00482Q8N8I6 264 aa14.06□□□□□ -0.16
SHANK1-203ENST00000391813 ADAMTS20P59510 1910 aa14.06□□□□□ -0.16
SHANK1-203ENST00000391813 ESRGQ1W209 222 aa14.06□□□□□ -0.16
SHANK1-203ENST00000391813 EGFEM1PQ0D2K5 195 aa14.05□□□□□ -0.16
SHANK1-203ENST00000391813 UNQ6190/PRO20217Q6UXQ8 127 aa14.05□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00315P59091 139 aa14.05□□□□□ -0.16
SHANK1-203ENST00000391813 TRAV10A0A0B4J240 114 aa14.04□□□□□ -0.16
SHANK1-203ENST00000391813 CASC2Q6XLA1 102 aa14.04□□□□□ -0.16
SHANK1-203ENST00000391813 LINC01561Q8N1V8 128 aa14.04□□□□□ -0.16
SHANK1-203ENST00000391813 IGLV4-60A0A075B6I1 120 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 A0A096LNI7 61 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 ODF3L2Q3SX64 289 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00575Q6W349 94 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 SETD2Q9BYW2 2564 aaPredicted RBP14.02□□□□□ -0.17
SHANK1-203ENST00000391813 LRCOL1A6NCL2 159 aa14.02□□□□□ -0.17
SHANK1-203ENST00000391813 LINC00208Q96KT6 92 aa14.02□□□□□ -0.17
SHANK1-203ENST00000391813 PRR3P79522 188 aaKnown RBP14.01□□□□□ -0.17
SHANK1-203ENST00000391813 C1orf137Q5JT78 98 aa14.01□□□□□ -0.17
SHANK1-203ENST00000391813 MTORP42345 2549 aa14.01□□□□□ -0.17
SHANK1-203ENST00000391813 EDN2P20800 178 aa14□□□□□ -0.17
SHANK1-203ENST00000391813 C18orf65Q6ZTR6 163 aa13.99□□□□□ -0.17
SHANK1-203ENST00000391813 WFDC10AQ9H1F0 79 aa13.99□□□□□ -0.17
SHANK1-203ENST00000391813 C4orf48Q5BLP8 95 aa13.99□□□□□ -0.17
SHANK1-203ENST00000391813 A0A1B0GUV1 79 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 Q6ZSN1 163 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 K7ERS5 55 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 EXPH5Q8NEV8 1989 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 C9orf116Q5BN46 136 aaPredicted RBP13.97□□□□□ -0.17
SHANK1-203ENST00000391813 Q8N2B8 174 aa13.97□□□□□ -0.17
SHANK1-203ENST00000391813 IGLV5-45A0A087WSX0 123 aa13.97□□□□□ -0.17
SHANK1-203ENST00000391813 OXLD1Q5BKU9 147 aa13.97□□□□□ -0.17
SHANK1-203ENST00000391813 IGLV1-51P01701 117 aa13.96□□□□□ -0.18
SHANK1-203ENST00000391813 A0A0J9YWU9 116 aa13.95□□□□□ -0.18
SHANK1-203ENST00000391813 PSPHP1O15172 72 aa13.95□□□□□ -0.18
SHANK1-203ENST00000391813 C4orf26Q17RF5 130 aa13.94□□□□□ -0.18
SHANK1-203ENST00000391813 FAM19A4Q96LR4 140 aa13.94□□□□□ -0.18
SHANK1-203ENST00000391813 FLNBO75369 2602 aaKnown RBP13.93□□□□□ -0.18
SHANK1-203ENST00000391813 POLQO75417 2590 aa13.93□□□□□ -0.18
SHANK1-203ENST00000391813 IGHV4-30-4P0DP06 118 aa13.92□□□□□ -0.18
SHANK1-203ENST00000391813 FHL2Q14192 279 aa13.92□□□□□ -0.18
SHANK1-203ENST00000391813 KPRPQ5T749 579 aaPredicted RBP13.92□□□□□ -0.18
SHANK1-203ENST00000391813 PTPRBP23467 1997 aa13.9□□□□□ -0.18
SHANK1-203ENST00000391813 RPL37AP8A6NKH3 93 aa13.9□□□□□ -0.19
SHANK1-203ENST00000391813 hDV103S1A0JD37 113 aa13.89□□□□□ -0.19
SHANK1-203ENST00000391813 RAI1Q7Z5J4 1906 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-203ENST00000391813 IGHV3OR16-9A0A0B4J2B5 98 aa13.89□□□□□ -0.19
SHANK1-203ENST00000391813 FAM218AQ96MZ4 157 aa13.88□□□□□ -0.19
SHANK1-203ENST00000391813 F8WDY8 70 aa13.86□□□□□ -0.19
SHANK1-203ENST00000391813 NANOS2P60321 138 aaKnown RBP13.86□□□□□ -0.19
SHANK1-203ENST00000391813 RETNQ9HD89 108 aa13.86□□□□□ -0.19
SHANK1-203ENST00000391813 LIMD2Q9BT23 127 aa13.85□□□□□ -0.19
SHANK1-203ENST00000391813 ZNF706Q9Y5V0 76 aaPredicted RBP13.85□□□□□ -0.19
SHANK1-203ENST00000391813 NHLRC4P0CG21 123 aaPredicted RBP13.84□□□□□ -0.19
SHANK1-203ENST00000391813 ACANP16112 2415 aa13.84□□□□□ -0.19
SHANK1-203ENST00000391813 C11orf72Q8NBR9 251 aa13.82□□□□□ -0.2
SHANK1-203ENST00000391813 FHL3Q13643 280 aa13.82□□□□□ -0.2
SHANK1-203ENST00000391813 SPATA3Q8NHX4 192 aa13.82□□□□□ -0.2
SHANK1-203ENST00000391813 HCG22E2RYF7 251 aa13.81□□□□□ -0.2
SHANK1-203ENST00000391813 ANKRD17O75179 2603 aaKnown RBP13.81□□□□□ -0.2
SHANK1-203ENST00000391813 F8P00451 2351 aa13.81□□□□□ -0.2
SHANK1-203ENST00000391813 A0A1B0GW54 56 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 C2orf48Q96LS8 159 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 C10orf25Q5T742 122 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 LITAFQ99732 161 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 H0Y9P7 68 aa13.79□□□□□ -0.2
SHANK1-203ENST00000391813 NUPR2A6NF83 97 aa13.79□□□□□ -0.2
SHANK1-203ENST00000391813 A8MTW9 85 aa13.79□□□□□ -0.2
SHANK1-203ENST00000391813 LOC110117498A0A087WWA1 95 aa13.78□□□□□ -0.2
SHANK1-203ENST00000391813 Q6ZQT0 140 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 C6orf223Q8N319 242 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 PLAC8L1A1L4L8 177 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 REG3GQ6UW15 175 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.74□□□□□ -0.21
SHANK1-203ENST00000391813 SPINK6Q6UWN8 80 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms