RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 WFDC13Q8IUB5 93 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 DOPEY1Q5JWR5 2465 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 PRM2P04554 102 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 C14orf177Q52M58 125 aa14.14□□□□□ -0.15
SHANK1-203ENST00000391813 KIR2DL5BQ8NHK3 375 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 TMEM254Q8TBM7 123 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 CENPFP49454 3210 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 LELP1Q5T871 98 aa14.13□□□□□ -0.15
SHANK1-203ENST00000391813 FN1P02751 2386 aaKnown RBP14.12□□□□□ -0.15
SHANK1-203ENST00000391813 FAM30AQ9NZY2 134 aa14.12□□□□□ -0.15
SHANK1-203ENST00000391813 BEAN1Q3B7T3 259 aa14.11□□□□□ -0.15
SHANK1-203ENST00000391813 C16orf95Q9H693 158 aa14.11□□□□□ -0.15
SHANK1-203ENST00000391813 CYSRT1A8MQ03 144 aa14.11□□□□□ -0.15
SHANK1-203ENST00000391813 CELA1Q9UNI1 258 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 Q6ZVQ6 151 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 IGKV2-24A0A0C4DH68 120 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 Q8N9L7 120 aa14.1□□□□□ -0.15
SHANK1-203ENST00000391813 IGLV5-39A0A0G2JS06 123 aa14.09□□□□□ -0.15
SHANK1-203ENST00000391813 IGKV2-28A0A075B6P5 120 aa14.09□□□□□ -0.15
SHANK1-203ENST00000391813 IGKV2D-28P01615 120 aa14.09□□□□□ -0.15
SHANK1-203ENST00000391813 TRBV7-6A0A0J9YX20 115 aa14.08□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00337Q8N6G1 96 aa14.08□□□□□ -0.16
SHANK1-203ENST00000391813 DEFB131BA0A096LNP1 70 aa14.07□□□□□ -0.16
SHANK1-203ENST00000391813 CXCL6P80162 114 aa14.07□□□□□ -0.16
SHANK1-203ENST00000391813 LINC01547P58512 204 aaPredicted RBP14.06□□□□□ -0.16
SHANK1-203ENST00000391813 TET2Q6N021 2002 aaPredicted RBP14.06□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00482Q8N8I6 264 aa14.06□□□□□ -0.16
SHANK1-203ENST00000391813 ADAMTS20P59510 1910 aa14.06□□□□□ -0.16
SHANK1-203ENST00000391813 ESRGQ1W209 222 aa14.06□□□□□ -0.16
SHANK1-203ENST00000391813 EGFEM1PQ0D2K5 195 aa14.05□□□□□ -0.16
SHANK1-203ENST00000391813 UNQ6190/PRO20217Q6UXQ8 127 aa14.05□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00315P59091 139 aa14.05□□□□□ -0.16
SHANK1-203ENST00000391813 TRAV10A0A0B4J240 114 aa14.04□□□□□ -0.16
SHANK1-203ENST00000391813 CASC2Q6XLA1 102 aa14.04□□□□□ -0.16
SHANK1-203ENST00000391813 LINC01561Q8N1V8 128 aa14.04□□□□□ -0.16
SHANK1-203ENST00000391813 IGLV4-60A0A075B6I1 120 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 A0A096LNI7 61 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 ODF3L2Q3SX64 289 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 LINC00575Q6W349 94 aa14.03□□□□□ -0.16
SHANK1-203ENST00000391813 SETD2Q9BYW2 2564 aaPredicted RBP14.02□□□□□ -0.17
SHANK1-203ENST00000391813 LRCOL1A6NCL2 159 aa14.02□□□□□ -0.17
SHANK1-203ENST00000391813 LINC00208Q96KT6 92 aa14.02□□□□□ -0.17
SHANK1-203ENST00000391813 PRR3P79522 188 aaKnown RBP14.01□□□□□ -0.17
SHANK1-203ENST00000391813 C1orf137Q5JT78 98 aa14.01□□□□□ -0.17
SHANK1-203ENST00000391813 MTORP42345 2549 aa14.01□□□□□ -0.17
SHANK1-203ENST00000391813 EDN2P20800 178 aa14□□□□□ -0.17
SHANK1-203ENST00000391813 C18orf65Q6ZTR6 163 aa13.99□□□□□ -0.17
SHANK1-203ENST00000391813 WFDC10AQ9H1F0 79 aa13.99□□□□□ -0.17
SHANK1-203ENST00000391813 C4orf48Q5BLP8 95 aa13.99□□□□□ -0.17
SHANK1-203ENST00000391813 A0A1B0GUV1 79 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 Q6ZSN1 163 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 K7ERS5 55 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 EXPH5Q8NEV8 1989 aa13.98□□□□□ -0.17
SHANK1-203ENST00000391813 C9orf116Q5BN46 136 aaPredicted RBP13.97□□□□□ -0.17
SHANK1-203ENST00000391813 Q8N2B8 174 aa13.97□□□□□ -0.17
SHANK1-203ENST00000391813 IGLV5-45A0A087WSX0 123 aa13.97□□□□□ -0.17
SHANK1-203ENST00000391813 OXLD1Q5BKU9 147 aa13.97□□□□□ -0.17
SHANK1-203ENST00000391813 IGLV1-51P01701 117 aa13.96□□□□□ -0.18
SHANK1-203ENST00000391813 A0A0J9YWU9 116 aa13.95□□□□□ -0.18
SHANK1-203ENST00000391813 PSPHP1O15172 72 aa13.95□□□□□ -0.18
SHANK1-203ENST00000391813 C4orf26Q17RF5 130 aa13.94□□□□□ -0.18
SHANK1-203ENST00000391813 FAM19A4Q96LR4 140 aa13.94□□□□□ -0.18
SHANK1-203ENST00000391813 FLNBO75369 2602 aaKnown RBP13.93□□□□□ -0.18
SHANK1-203ENST00000391813 POLQO75417 2590 aa13.93□□□□□ -0.18
SHANK1-203ENST00000391813 IGHV4-30-4P0DP06 118 aa13.92□□□□□ -0.18
SHANK1-203ENST00000391813 FHL2Q14192 279 aa13.92□□□□□ -0.18
SHANK1-203ENST00000391813 KPRPQ5T749 579 aaPredicted RBP13.92□□□□□ -0.18
SHANK1-203ENST00000391813 PTPRBP23467 1997 aa13.9□□□□□ -0.18
SHANK1-203ENST00000391813 RPL37AP8A6NKH3 93 aa13.9□□□□□ -0.19
SHANK1-203ENST00000391813 hDV103S1A0JD37 113 aa13.89□□□□□ -0.19
SHANK1-203ENST00000391813 RAI1Q7Z5J4 1906 aaPredicted RBP13.89□□□□□ -0.19
SHANK1-203ENST00000391813 IGHV3OR16-9A0A0B4J2B5 98 aa13.89□□□□□ -0.19
SHANK1-203ENST00000391813 FAM218AQ96MZ4 157 aa13.88□□□□□ -0.19
SHANK1-203ENST00000391813 F8WDY8 70 aa13.86□□□□□ -0.19
SHANK1-203ENST00000391813 NANOS2P60321 138 aaKnown RBP13.86□□□□□ -0.19
SHANK1-203ENST00000391813 RETNQ9HD89 108 aa13.86□□□□□ -0.19
SHANK1-203ENST00000391813 LIMD2Q9BT23 127 aa13.85□□□□□ -0.19
SHANK1-203ENST00000391813 ZNF706Q9Y5V0 76 aaPredicted RBP13.85□□□□□ -0.19
SHANK1-203ENST00000391813 NHLRC4P0CG21 123 aaPredicted RBP13.84□□□□□ -0.19
SHANK1-203ENST00000391813 ACANP16112 2415 aa13.84□□□□□ -0.19
SHANK1-203ENST00000391813 C11orf72Q8NBR9 251 aa13.82□□□□□ -0.2
SHANK1-203ENST00000391813 FHL3Q13643 280 aa13.82□□□□□ -0.2
SHANK1-203ENST00000391813 SPATA3Q8NHX4 192 aa13.82□□□□□ -0.2
SHANK1-203ENST00000391813 HCG22E2RYF7 251 aa13.81□□□□□ -0.2
SHANK1-203ENST00000391813 ANKRD17O75179 2603 aaKnown RBP13.81□□□□□ -0.2
SHANK1-203ENST00000391813 F8P00451 2351 aa13.81□□□□□ -0.2
SHANK1-203ENST00000391813 A0A1B0GW54 56 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 C2orf48Q96LS8 159 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 C10orf25Q5T742 122 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 LITAFQ99732 161 aa13.8□□□□□ -0.2
SHANK1-203ENST00000391813 H0Y9P7 68 aa13.79□□□□□ -0.2
SHANK1-203ENST00000391813 NUPR2A6NF83 97 aa13.79□□□□□ -0.2
SHANK1-203ENST00000391813 A8MTW9 85 aa13.79□□□□□ -0.2
SHANK1-203ENST00000391813 LOC110117498A0A087WWA1 95 aa13.78□□□□□ -0.2
SHANK1-203ENST00000391813 Q6ZQT0 140 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 C6orf223Q8N319 242 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 PLAC8L1A1L4L8 177 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 REG3GQ6UW15 175 aa13.75□□□□□ -0.21
SHANK1-203ENST00000391813 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.74□□□□□ -0.21
SHANK1-203ENST00000391813 SPINK6Q6UWN8 80 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms