RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TROQ12816 1431 aaPredicted RBP-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 C9orf92A6NGG3 77 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 SNCAP37840 140 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 PYDC1Q8WXC3 89 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 CDC42SE2Q9NRR3 84 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 CDKN2A-AS1Q9UH64 79 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 COL4A6Q14031 1691 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 ADAMTS12P58397 1594 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 REV3LO60673 3130 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 NKTRP30414 1462 aaKnown RBP-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 C1orf167Q5SNV9 1468 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 MYOM1P52179 1685 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 A0A1B0GU69 56 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 LOC100130705A0A1B0GUX0 176 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 Q56UQ5 140 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 COMMD6Q7Z4G1 85 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 DMXL1Q9Y485 3027 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 CPSF1Q10570 1443 aaKnown RBP-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 TRANK1O15050 2925 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 PSME4Q14997 1843 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 AKAP13Q12802 2813 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 COX6CP09669 75 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 TRAPPC2P0DI81 140 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 TRAPPC2BP0DI82 140 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 SAA2P0DJI9 122 aaPredicted RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 ARPC4P59998 168 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 LSM10Q969L4 123 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 XRN1Q8IZH2 1706 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 PLECQ15149 4684 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 QRICH2Q9H0J4 1663 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 SMG6Q86US8 1419 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 TCHHQ07283 1943 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 MIF4GDA9UHW6 222 aaKnown RBP-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 F6UZH7 168 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 DEFA5Q01523 94 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 C5orf38Q86SI9 138 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 LCN9Q8WX39 176 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 MRPL34Q9BQ48 92 aaKnown RBP-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 LINC00846Q9NV44 126 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 HIGD1BQ9P298 99 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 GRIN2AQ12879 1464 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 DNAH1Q9P2D7 4330 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 ANKRD50Q9ULJ7 1429 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 KALRNO60229 2985 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 ANK3Q12955 4377 aaKnown RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 TET3O43151 1660 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 PLEKHH2Q8IVE3 1493 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 FAM25AB3EWG3 89 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 FAM25CB3EWG5 89 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 FAM25GB3EWG6 89 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 APOC2P02655 101 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 SMIM21Q3B7S5 101 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 WFDC13Q8IUB5 93 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 ANP32BQ92688 251 aaKnown RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 C12orf57Q99622 126 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 PAIP2BQ9ULR5 123 aaKnown RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 RNF213Q63HN8 5207 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 PDE4DIPQ5VU43 2346 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 ANKRD11Q6UB99 2663 aaPredicted RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 CLIP1P30622 1438 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 NAIPQ13075 1403 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 EHBP1L1Q8N3D4 1523 aa-1.1□□□□□ -2.58
SNORD28B-201ENST00000390993 DR1Q01658 176 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 CATR1Q13166 79 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 MEIG1Q5JSS6 88 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 VAMP8Q9BV40 100 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 MANBALQ9NQG1 85 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 EDC4Q6P2E9 1401 aaKnown RBP-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 MGAM2Q2M2H8 2515 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 DNAH11Q96DT5 4516 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 SPTY2D1-AS1A0A0U1RR47 76 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 FAM223BA6NKX1 122 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 H3BQF6 201 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 ATP5EP56381 51 aaPredicted RBP-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 GNG11P61952 73 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 C6orf201Q7Z4U5 140 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 PSENENQ9NZ42 101 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 MTORP42345 2549 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 CICQ96RK0 1608 aaPredicted RBP-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 NIPBLQ6KC79 2804 aaeCLIP-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 NLRP1Q9C000 1473 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 UBE2L5PA0A1B0GUS4 154 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 GNGT1P63211 74 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 UBE2L3P68036 154 aaKnown RBP-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 PRO1854Q9UHT4 67 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 ADGRL2O95490 1459 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 ARHGEF5Q12774 1597 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 MYH7P12883 1935 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 RYR2Q92736 4967 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 A0A0G2JND7 137 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 SELENOWP63302 87 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 NMSQ5H8A3 153 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 PP6455Q8WZ26 134 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 LINC00474Q9P2X8 69 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 LRRC37AA6NMS7 1700 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 DNAH7Q8WXX0 4024 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 KTN1Q86UP2 1357 aaKnown RBP-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 APOBP04114 4563 aaKnown RBP-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 DNHD1Q96M86 4753 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 PDCD11Q14690 1871 aaKnown RBP-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 541.5 ms