RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 MBD5Q9P267 1494 aa-2.09□□□□□ -2.74
SNORA40.3-201ENST00000390964 MUC17Q685J3 4493 aa-2.1□□□□□ -2.75
SNORA40.3-201ENST00000390964 DIP2CQ9Y2E4 1556 aa-2.1□□□□□ -2.75
SNORA40.3-201ENST00000390964 MARF1Q9Y4F3 1742 aaKnown RBP-2.11□□□□□ -2.75
SNORA40.3-201ENST00000390964 PLEKHH2Q8IVE3 1493 aa-2.11□□□□□ -2.75
SNORA40.3-201ENST00000390964 SEC11AP67812 179 aa-2.11□□□□□ -2.75
SNORA40.3-201ENST00000390964 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.11□□□□□ -2.75
SNORA40.3-201ENST00000390964 ITPR3Q14573 2671 aa-2.12□□□□□ -2.75
SNORA40.3-201ENST00000390964 LOC105371267A0A1B0GV96 52 aa-2.12□□□□□ -2.75
SNORA40.3-201ENST00000390964 A0A1B0GWA3 101 aa-2.12□□□□□ -2.75
SNORA40.3-201ENST00000390964 GNG7O60262 68 aa-2.12□□□□□ -2.75
SNORA40.3-201ENST00000390964 FGF7P21781 194 aa-2.12□□□□□ -2.75
SNORA40.3-201ENST00000390964 PTPN23Q9H3S7 1636 aa-2.13□□□□□ -2.75
SNORA40.3-201ENST00000390964 ADAMTS12P58397 1594 aa-2.13□□□□□ -2.75
SNORA40.3-201ENST00000390964 CRIPTQ9P021 101 aa-2.13□□□□□ -2.75
SNORA40.3-201ENST00000390964 KNL1Q8NG31 2342 aa-2.13□□□□□ -2.75
SNORA40.3-201ENST00000390964 NLRP1Q9C000 1473 aa-2.14□□□□□ -2.75
SNORA40.3-201ENST00000390964 PKHD1L1Q86WI1 4243 aa-2.14□□□□□ -2.75
SNORA40.3-201ENST00000390964 VPS13DQ5THJ4 4388 aa-2.14□□□□□ -2.75
SNORA40.3-201ENST00000390964 UBE2L5PA0A1B0GUS4 154 aa-2.14□□□□□ -2.75
SNORA40.3-201ENST00000390964 UBE2L3P68036 154 aaKnown RBP-2.14□□□□□ -2.75
SNORA40.3-201ENST00000390964 C9orf153Q5TBE3 101 aa-2.14□□□□□ -2.75
SNORA40.3-201ENST00000390964 MRC2Q9UBG0 1479 aa-2.14□□□□□ -2.75
SNORA40.3-201ENST00000390964 FAM223BA6NKX1 122 aa-2.15□□□□□ -2.75
SNORA40.3-201ENST00000390964 F6UZH7 168 aa-2.15□□□□□ -2.75
SNORA40.3-201ENST00000390964 I3L3M4 83 aa-2.15□□□□□ -2.75
SNORA40.3-201ENST00000390964 LINC00846Q9NV44 126 aa-2.15□□□□□ -2.75
SNORA40.3-201ENST00000390964 REV3LO60673 3130 aa-2.15□□□□□ -2.75
SNORA40.3-201ENST00000390964 TEP1Q99973 2627 aaKnown RBP-2.15□□□□□ -2.75
SNORA40.3-201ENST00000390964 DNAH3Q8TD57 4116 aa-2.15□□□□□ -2.75
SNORA40.3-201ENST00000390964 DNAH9Q9NYC9 4486 aa-2.16□□□□□ -2.76
SNORA40.3-201ENST00000390964 OOSP1A8MZH6 123 aa-2.16□□□□□ -2.76
SNORA40.3-201ENST00000390964 COX6CP09669 75 aa-2.16□□□□□ -2.76
SNORA40.3-201ENST00000390964 COL4A6Q14031 1691 aa-2.16□□□□□ -2.76
SNORA40.3-201ENST00000390964 HECTD1Q9ULT8 2610 aa-2.17□□□□□ -2.76
SNORA40.3-201ENST00000390964 AKAP13Q12802 2813 aa-2.17□□□□□ -2.76
SNORA40.3-201ENST00000390964 KTN1Q86UP2 1357 aaKnown RBP-2.17□□□□□ -2.76
SNORA40.3-201ENST00000390964 UBE2D3P61077 147 aa-2.17□□□□□ -2.76
SNORA40.3-201ENST00000390964 GNG11P61952 73 aa-2.17□□□□□ -2.76
SNORA40.3-201ENST00000390964 UBE2D2P62837 147 aa-2.17□□□□□ -2.76
SNORA40.3-201ENST00000390964 PRRC2CQ9Y520 2896 aaKnown RBP-2.17□□□□□ -2.76
SNORA40.3-201ENST00000390964 AKAP9Q99996 3911 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 A0A1B0GU69 56 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 TRAPPC2P0DI81 140 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 TRAPPC2BP0DI82 140 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 SAA2P0DJI9 122 aaPredicted RBP-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 ATP5EP56381 51 aaPredicted RBP-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 Q0VG73 95 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 MANBALQ9NQG1 85 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 SLIT1O75093 1534 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 PDCD11Q14690 1871 aaKnown RBP-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 MYO18BQ8IUG5 2567 aa-2.18□□□□□ -2.76
SNORA40.3-201ENST00000390964 A2ML1A8K2U0 1454 aa-2.19□□□□□ -2.76
SNORA40.3-201ENST00000390964 MT1AP04731 61 aa-2.19□□□□□ -2.76
SNORA40.3-201ENST00000390964 FASNP49327 2511 aaKnown RBP-2.19□□□□□ -2.76
SNORA40.3-201ENST00000390964 EDC4Q6P2E9 1401 aaKnown RBP-2.19□□□□□ -2.76
SNORA40.3-201ENST00000390964 TOP2BQ02880 1626 aa-2.2□□□□□ -2.76
SNORA40.3-201ENST00000390964 SFTA2Q6UW10 78 aa-2.2□□□□□ -2.76
SNORA40.3-201ENST00000390964 DPH3P1Q9H4G8 78 aa-2.2□□□□□ -2.76
SNORA40.3-201ENST00000390964 PRO1854Q9UHT4 67 aa-2.2□□□□□ -2.76
SNORA40.3-201ENST00000390964 EPPK1P58107 5090 aaKnown RBP-2.2□□□□□ -2.76
SNORA40.3-201ENST00000390964 KIAA1551Q9HCM1 1747 aa-2.2□□□□□ -2.76
SNORA40.3-201ENST00000390964 H0YGG7 62 aa-2.21□□□□□ -2.76
SNORA40.3-201ENST00000390964 LAMA1P25391 3075 aa-2.21□□□□□ -2.76
SNORA40.3-201ENST00000390964 SCAPERQ9BY12 1400 aa-2.22□□□□□ -2.76
SNORA40.3-201ENST00000390964 LRRC37AA6NMS7 1700 aa-2.22□□□□□ -2.77
SNORA40.3-201ENST00000390964 TNRC18O15417 2968 aaPredicted RBP-2.23□□□□□ -2.77
SNORA40.3-201ENST00000390964 AKAIN1P0CW23 69 aa-2.23□□□□□ -2.77
SNORA40.3-201ENST00000390964 C12orf57Q99622 126 aa-2.23□□□□□ -2.77
SNORA40.3-201ENST00000390964 UNC13AQ9UPW8 1703 aa-2.24□□□□□ -2.77
SNORA40.3-201ENST00000390964 NDUFA2O43678 99 aa-2.24□□□□□ -2.77
SNORA40.3-201ENST00000390964 CCDC58Q4VC31 144 aa-2.24□□□□□ -2.77
SNORA40.3-201ENST00000390964 MRPL34Q9BQ48 92 aaKnown RBP-2.24□□□□□ -2.77
SNORA40.3-201ENST00000390964 CUL7Q14999 1698 aa-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 TRANK1O15050 2925 aa-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 FAM24AA6NFZ4 105 aa-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 CCL22O00626 93 aa-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 C6orf201Q7Z4U5 140 aa-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 PP6455Q8WZ26 134 aa-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 LYSTQ99698 3801 aa-2.25□□□□□ -2.77
SNORA40.3-201ENST00000390964 NAP1L6A6NFF2 107 aa-2.26□□□□□ -2.77
SNORA40.3-201ENST00000390964 SNCAP37840 140 aa-2.26□□□□□ -2.77
SNORA40.3-201ENST00000390964 CUBNO60494 3623 aa-2.26□□□□□ -2.77
SNORA40.3-201ENST00000390964 ANKRD36A6QL64 1941 aa-2.27□□□□□ -2.77
SNORA40.3-201ENST00000390964 ZZEF1O43149 2961 aa-2.27□□□□□ -2.77
SNORA40.3-201ENST00000390964 A0A087WVE0 104 aa-2.27□□□□□ -2.77
SNORA40.3-201ENST00000390964 TROQ12816 1431 aaPredicted RBP-2.27□□□□□ -2.77
SNORA40.3-201ENST00000390964 NCOA3Q9Y6Q9 1424 aa-2.27□□□□□ -2.77
SNORA40.3-201ENST00000390964 DOPEY1Q5JWR5 2465 aa-2.28□□□□□ -2.77
SNORA40.3-201ENST00000390964 COL14A1Q05707 1796 aaKnown RBP-2.28□□□□□ -2.78
SNORA40.3-201ENST00000390964 TRAV30A0A087WSZ9 112 aa-2.3□□□□□ -2.78
SNORA40.3-201ENST00000390964 K7EP13 123 aa-2.3□□□□□ -2.78
SNORA40.3-201ENST00000390964 LELP1Q5T871 98 aa-2.3□□□□□ -2.78
SNORA40.3-201ENST00000390964 HEPN1Q6WQI6 88 aa-2.3□□□□□ -2.78
SNORA40.3-201ENST00000390964 CDKN2A-AS1Q9UH64 79 aa-2.3□□□□□ -2.78
SNORA40.3-201ENST00000390964 TARBP1Q13395 1621 aaKnown RBP-2.31□□□□□ -2.78
SNORA40.3-201ENST00000390964 CICQ96RK0 1608 aaPredicted RBP-2.31□□□□□ -2.78
SNORA40.3-201ENST00000390964 C1orf54Q8WWF1 131 aa-2.31□□□□□ -2.78
SNORA40.3-201ENST00000390964 H3BQF6 201 aa-2.32□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 176.2 ms