RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 POLR2KP53803 58 aaKnown RBP4.23□□□□□ -1.73
RFX3-204ENST00000382004 LIMD2Q9BT23 127 aa4.23□□□□□ -1.73
RFX3-204ENST00000382004 TMEM254Q8TBM7 123 aa4.23□□□□□ -1.73
RFX3-204ENST00000382004 PRORYQ9H606 182 aa4.23□□□□□ -1.73
RFX3-204ENST00000382004 LINC00242Q5T6M2 205 aa4.23□□□□□ -1.73
RFX3-204ENST00000382004 MUC6Q6W4X9 2439 aa4.23□□□□□ -1.73
RFX3-204ENST00000382004 A0A1W2PNU3 283 aaPredicted RBP4.23□□□□□ -1.73
RFX3-204ENST00000382004 A8MTW9 85 aa4.23□□□□□ -1.73
RFX3-204ENST00000382004 FSTL3O95633 263 aa4.23□□□□□ -1.73
RFX3-204ENST00000382004 CCDC168Q8NDH2 2452 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 IGLV4-60A0A075B6I1 120 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 KLLNB2CW77 178 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 Q8N6K4 173 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 LINC00574Q9H8X3 128 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 SPACA4Q8TDM5 124 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 SMIM1B2RUZ4 78 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 C1orf134Q5TEV5 83 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 ZNF295-AS1Q8N0V1 137 aa4.22□□□□□ -1.73
RFX3-204ENST00000382004 IGIPA6NJ69 53 aa4.21□□□□□ -1.74
RFX3-204ENST00000382004 ACYP2P14621 99 aa4.21□□□□□ -1.74
RFX3-204ENST00000382004 Q6ZTC4 211 aa4.21□□□□□ -1.74
RFX3-204ENST00000382004 NOTCH2Q04721 2471 aa4.21□□□□□ -1.74
RFX3-204ENST00000382004 EDN2P20800 178 aa4.21□□□□□ -1.74
RFX3-204ENST00000382004 C2CD3Q4AC94 2353 aa4.21□□□□□ -1.74
RFX3-204ENST00000382004 ZFHX2Q9C0A1 2572 aaPredicted RBP4.2□□□□□ -1.74
RFX3-204ENST00000382004 ATP11AUNQ6ZP68 121 aa4.2□□□□□ -1.74
RFX3-204ENST00000382004 SMIM29Q86T20 159 aa4.2□□□□□ -1.74
RFX3-204ENST00000382004 ADAMTSL4-AS1Q5T5F5 129 aa4.2□□□□□ -1.74
RFX3-204ENST00000382004 Q6ZPA2 131 aa4.2□□□□□ -1.74
RFX3-204ENST00000382004 EIF4EBP1Q13541 118 aaPredicted RBP4.2□□□□□ -1.74
RFX3-204ENST00000382004 TSPEAR-AS2P59090 65 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 SMR3AQ99954 134 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 MYO18BQ8IUG5 2567 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 SMCR5Q8TEV8 140 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 CHCHD7Q9BUK0 85 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 LINC00846Q9NV44 126 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 C6orf48Q9UBA6 75 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 ZNF580Q9UK33 172 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 YPEL4Q96NS1 127 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 LRP4O75096 1905 aa4.19□□□□□ -1.74
RFX3-204ENST00000382004 MOBPQ13875 183 aa4.18□□□□□ -1.74
RFX3-204ENST00000382004 C11orf71Q6IPW1 123 aa4.18□□□□□ -1.74
RFX3-204ENST00000382004 C8orf87E5RJ46 101 aa4.18□□□□□ -1.74
RFX3-204ENST00000382004 TTC28Q96AY4 2481 aa4.18□□□□□ -1.74
RFX3-204ENST00000382004 FHL2Q14192 279 aa4.18□□□□□ -1.74
RFX3-204ENST00000382004 CXCL6P80162 114 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 KIAA0087Q14695 138 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 PRO0628Q9UI54 55 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 ACACBO00763 2458 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 CACNA1AO00555 2505 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 IGLV1-40P01703 118 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 Q6ZRU5 148 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 PTPRSQ13332 1948 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 C22orf24Q9Y442 160 aa4.17□□□□□ -1.74
RFX3-204ENST00000382004 BDP1A6H8Y1 2624 aa4.16□□□□□ -1.74
RFX3-204ENST00000382004 ODF3L2Q3SX64 289 aa4.16□□□□□ -1.74
RFX3-204ENST00000382004 ANKHD1Q8IWZ3 2542 aaKnown RBP4.16□□□□□ -1.74
RFX3-204ENST00000382004 LYPD5Q6UWN5 251 aa4.15□□□□□ -1.74
RFX3-204ENST00000382004 PTPRBP23467 1997 aa4.15□□□□□ -1.75
RFX3-204ENST00000382004 Q6ZSN1 163 aa4.15□□□□□ -1.75
RFX3-204ENST00000382004 Q8N2B8 174 aa4.15□□□□□ -1.75
RFX3-204ENST00000382004 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
RFX3-204ENST00000382004 F8WDY8 70 aa4.15□□□□□ -1.75
RFX3-204ENST00000382004 CNFNQ9BYD5 112 aa4.14□□□□□ -1.75
RFX3-204ENST00000382004 LINC00313P59037 77 aa4.14□□□□□ -1.75
RFX3-204ENST00000382004 SPATA3Q8NHX4 192 aa4.14□□□□□ -1.75
RFX3-204ENST00000382004 AMELXQ99217 191 aa4.13□□□□□ -1.75
RFX3-204ENST00000382004 APLNQ9ULZ1 77 aa4.13□□□□□ -1.75
RFX3-204ENST00000382004 COL5A1P20908 1838 aaPredicted RBP4.13□□□□□ -1.75
RFX3-204ENST00000382004 IGLV1-51P01701 117 aa4.13□□□□□ -1.75
RFX3-204ENST00000382004 CRIP3Q6Q6R5 217 aa4.13□□□□□ -1.75
RFX3-204ENST00000382004 CHTF8P0CG12 524 aa4.13□□□□□ -1.75
RFX3-204ENST00000382004 CUL9Q8IWT3 2517 aa4.13□□□□□ -1.75
RFX3-204ENST00000382004 AVPP01185 164 aa4.12□□□□□ -1.75
RFX3-204ENST00000382004 URB1-AS1Q96HZ7 61 aa4.12□□□□□ -1.75
RFX3-204ENST00000382004 COL4A3Q01955 1670 aa4.12□□□□□ -1.75
RFX3-204ENST00000382004 A0A1B0GUV1 79 aa4.12□□□□□ -1.75
RFX3-204ENST00000382004 TYMSOSQ8TAI1 123 aa4.12□□□□□ -1.75
RFX3-204ENST00000382004 Q96NJ1 140 aa4.12□□□□□ -1.75
RFX3-204ENST00000382004 RPL37AP61513 92 aaKnown RBP4.11□□□□□ -1.75
RFX3-204ENST00000382004 MYO9AB2RTY4 2548 aa4.11□□□□□ -1.75
RFX3-204ENST00000382004 CRIPTQ9P021 101 aa4.11□□□□□ -1.75
RFX3-204ENST00000382004 CPAMD8Q8IZJ3 1885 aa4.11□□□□□ -1.75
RFX3-204ENST00000382004 FAM229AH3BQW9 127 aa4.11□□□□□ -1.75
RFX3-204ENST00000382004 ADAMTS20P59510 1910 aa4.11□□□□□ -1.75
RFX3-204ENST00000382004 LINC00167Q96N53 147 aa4.1□□□□□ -1.75
RFX3-204ENST00000382004 LINC00310P59036 64 aa4.1□□□□□ -1.75
RFX3-204ENST00000382004 LINC01600Q96MT4 127 aa4.1□□□□□ -1.75
RFX3-204ENST00000382004 MDFIQ99750 246 aa4.1□□□□□ -1.75
RFX3-204ENST00000382004 TRAV22A0A0B4J277 110 aa4.1□□□□□ -1.75
RFX3-204ENST00000382004 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
RFX3-204ENST00000382004 PHF5AQ7RTV0 110 aaKnown RBP4.1□□□□□ -1.75
RFX3-204ENST00000382004 LINC01561Q8N1V8 128 aa4.09□□□□□ -1.75
RFX3-204ENST00000382004 F8P00451 2351 aa4.09□□□□□ -1.75
RFX3-204ENST00000382004 CDIP1Q9H305 208 aa4.09□□□□□ -1.75
RFX3-204ENST00000382004 LINC00476Q8WZB0 136 aa4.08□□□□□ -1.76
RFX3-204ENST00000382004 KRTAP10-9P60411 292 aa4.08□□□□□ -1.76
RFX3-204ENST00000382004 FHL3Q13643 280 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms