RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 Q8IZM0 81 aa12.27□□□□□ -0.44
SGCB-201ENST00000381431 KIR2DL5BQ8NHK3 375 aa12.27□□□□□ -0.44
SGCB-201ENST00000381431 C5orf47Q569G3 176 aa12.27□□□□□ -0.45
SGCB-201ENST00000381431 H0Y9J4 135 aa12.26□□□□□ -0.45
SGCB-201ENST00000381431 FAM19A1Q7Z5A9 133 aa12.26□□□□□ -0.45
SGCB-201ENST00000381431 USP17L23D6RBM5 183 aa12.26□□□□□ -0.45
SGCB-201ENST00000381431 CCDC179H3BU77 68 aa12.26□□□□□ -0.45
SGCB-201ENST00000381431 LAMA1P25391 3075 aa12.26□□□□□ -0.45
SGCB-201ENST00000381431 LINC00315P59091 139 aa12.26□□□□□ -0.45
SGCB-201ENST00000381431 FHL2Q14192 279 aa12.25□□□□□ -0.45
SGCB-201ENST00000381431 BEAN1Q3B7T3 259 aa12.25□□□□□ -0.45
SGCB-201ENST00000381431 A0A087WZ39 114 aa12.25□□□□□ -0.45
SGCB-201ENST00000381431 Q9UF83 564 aa12.24□□□□□ -0.45
SGCB-201ENST00000381431 AKAP13Q12802 2813 aa12.24□□□□□ -0.45
SGCB-201ENST00000381431 C3orf22Q8N5N4 141 aa12.24□□□□□ -0.45
SGCB-201ENST00000381431 PCSK5Q92824 1860 aa12.23□□□□□ -0.45
SGCB-201ENST00000381431 COL4A2P08572 1712 aa12.23□□□□□ -0.45
SGCB-201ENST00000381431 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
SGCB-201ENST00000381431 PKIGQ9Y2B9 76 aa12.22□□□□□ -0.45
SGCB-201ENST00000381431 KLK5Q9Y337 293 aaPredicted RBP12.22□□□□□ -0.45
SGCB-201ENST00000381431 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
SGCB-201ENST00000381431 RETNQ9HD89 108 aa12.22□□□□□ -0.45
SGCB-201ENST00000381431 RPL37AP8A6NKH3 93 aa12.21□□□□□ -0.45
SGCB-201ENST00000381431 CSDC2Q9Y534 153 aaKnown RBP12.21□□□□□ -0.45
SGCB-201ENST00000381431 TRANK1O15050 2925 aa12.21□□□□□ -0.45
SGCB-201ENST00000381431 ATP5EP2Q5VTU8 51 aa12.21□□□□□ -0.46
SGCB-201ENST00000381431 ZNF73O43830 326 aaPredicted RBP12.2□□□□□ -0.46
SGCB-201ENST00000381431 IMUPQ9GZP8 106 aa12.2□□□□□ -0.46
SGCB-201ENST00000381431 RPL28P46779 137 aaKnown RBP12.19□□□□□ -0.46
SGCB-201ENST00000381431 A0A087WYN8 130 aa12.19□□□□□ -0.46
SGCB-201ENST00000381431 M0R378 163 aa12.19□□□□□ -0.46
SGCB-201ENST00000381431 TRAV10A0A0B4J240 114 aa12.18□□□□□ -0.46
SGCB-201ENST00000381431 PPDPFQ9H3Y8 114 aa12.18□□□□□ -0.46
SGCB-201ENST00000381431 A0A087WVE0 104 aa12.17□□□□□ -0.46
SGCB-201ENST00000381431 A0A0J9YWU9 116 aa12.17□□□□□ -0.46
SGCB-201ENST00000381431 SERP2Q8N6R1 65 aa12.17□□□□□ -0.46
SGCB-201ENST00000381431 COX17Q14061 63 aa12.17□□□□□ -0.46
SGCB-201ENST00000381431 B9D2Q9BPU9 175 aa12.17□□□□□ -0.46
SGCB-201ENST00000381431 NBEAQ8NFP9 2946 aa12.16□□□□□ -0.46
SGCB-201ENST00000381431 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
SGCB-201ENST00000381431 C11orf72Q8NBR9 251 aa12.16□□□□□ -0.46
SGCB-201ENST00000381431 TRBV10-3A0A0K0K1G6 114 aa12.15□□□□□ -0.46
SGCB-201ENST00000381431 SNURFQ9Y675 71 aa12.15□□□□□ -0.46
SGCB-201ENST00000381431 C14orf177Q52M58 125 aa12.15□□□□□ -0.46
SGCB-201ENST00000381431 EYSQ5T1H1 3165 aa12.15□□□□□ -0.46
SGCB-201ENST00000381431 FLNAP21333 2647 aaKnown RBP12.15□□□□□ -0.47
SGCB-201ENST00000381431 C6orf223Q8N319 242 aa12.14□□□□□ -0.47
SGCB-201ENST00000381431 FAM240AA0A1B0GVK7 77 aa12.14□□□□□ -0.47
SGCB-201ENST00000381431 FAM19A4Q96LR4 140 aa12.14□□□□□ -0.47
SGCB-201ENST00000381431 Q6ZTC4 211 aa12.13□□□□□ -0.47
SGCB-201ENST00000381431 FAM236DA0A1B0GTK5 79 aa12.13□□□□□ -0.47
SGCB-201ENST00000381431 FAM236CP0DP71 79 aa12.13□□□□□ -0.47
SGCB-201ENST00000381431 A8MTW9 85 aa12.12□□□□□ -0.47
SGCB-201ENST00000381431 COX7CP15954 63 aa12.12□□□□□ -0.47
SGCB-201ENST00000381431 LINC00337Q8N6G1 96 aa12.12□□□□□ -0.47
SGCB-201ENST00000381431 LINC01546A6NGU7 62 aa12.12□□□□□ -0.47
SGCB-201ENST00000381431 Q8N814 137 aa12.12□□□□□ -0.47
SGCB-201ENST00000381431 CFAP46Q8IYW2 2715 aa12.11□□□□□ -0.47
SGCB-201ENST00000381431 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
SGCB-201ENST00000381431 MPLKIPQ8TAP9 179 aa12.1□□□□□ -0.47
SGCB-201ENST00000381431 M0R2N4 97 aa12.1□□□□□ -0.47
SGCB-201ENST00000381431 LRCOL1A6NCL2 159 aa12.09□□□□□ -0.47
SGCB-201ENST00000381431 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.09□□□□□ -0.47
SGCB-201ENST00000381431 Q8N2B8 174 aa12.09□□□□□ -0.47
SGCB-201ENST00000381431 ITPR3Q14573 2671 aa12.09□□□□□ -0.47
SGCB-201ENST00000381431 SMCPP49901 116 aaPredicted RBP12.08□□□□□ -0.47
SGCB-201ENST00000381431 WFDC13Q8IUB5 93 aa12.08□□□□□ -0.47
SGCB-201ENST00000381431 FRYLO94915 3013 aa12.08□□□□□ -0.48
SGCB-201ENST00000381431 FRYQ5TBA9 3013 aa12.08□□□□□ -0.48
SGCB-201ENST00000381431 EGFEM1PQ0D2K5 195 aa12.08□□□□□ -0.48
SGCB-201ENST00000381431 Q6Q795 121 aa12.08□□□□□ -0.48
SGCB-201ENST00000381431 IGKV4-1P06312 121 aa12.07□□□□□ -0.48
SGCB-201ENST00000381431 Q6JHZ5 121 aa12.07□□□□□ -0.48
SGCB-201ENST00000381431 CDIP1Q9H305 208 aa12.07□□□□□ -0.48
SGCB-201ENST00000381431 COL6A3P12111 3177 aa12.07□□□□□ -0.48
SGCB-201ENST00000381431 PRR4Q16378 134 aa12.07□□□□□ -0.48
SGCB-201ENST00000381431 A0A1B0GUV1 79 aa12.06□□□□□ -0.48
SGCB-201ENST00000381431 BRK1Q8WUW1 75 aa12.06□□□□□ -0.48
SGCB-201ENST00000381431 C16orf95Q9H693 158 aa12.06□□□□□ -0.48
SGCB-201ENST00000381431 COL27A1Q8IZC6 1860 aaPredicted RBP12.06□□□□□ -0.48
SGCB-201ENST00000381431 CHKB-CPT1BH3BT56 60 aa12.06□□□□□ -0.48
SGCB-201ENST00000381431 IGHV3OR16-9A0A0B4J2B5 98 aa12.06□□□□□ -0.48
SGCB-201ENST00000381431 IGLV5-39A0A0G2JS06 123 aa12.06□□□□□ -0.48
SGCB-201ENST00000381431 C4orf48Q5BLP8 95 aa12.06□□□□□ -0.48
SGCB-201ENST00000381431 FAM19A3Q7Z5A8 133 aa12.05□□□□□ -0.48
SGCB-201ENST00000381431 DHRS4-AS1Q9P1J3 65 aa12.05□□□□□ -0.48
SGCB-201ENST00000381431 MUC7Q8TAX7 377 aa12.04□□□□□ -0.48
SGCB-201ENST00000381431 CELA1Q9UNI1 258 aa12.03□□□□□ -0.48
SGCB-201ENST00000381431 LINC00846Q9NV44 126 aa12.02□□□□□ -0.49
SGCB-201ENST00000381431 NDUFC2O95298 119 aa12.02□□□□□ -0.49
SGCB-201ENST00000381431 PRO0461Q9UI25 63 aa12.02□□□□□ -0.49
SGCB-201ENST00000381431 CHD6Q8TD26 2715 aa12.01□□□□□ -0.49
SGCB-201ENST00000381431 ZNF292O60281 2723 aa12.01□□□□□ -0.49
SGCB-201ENST00000381431 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
SGCB-201ENST00000381431 SPINK6Q6UWN8 80 aa12□□□□□ -0.49
SGCB-201ENST00000381431 HELZ2Q9BYK8 2649 aaKnown RBP12□□□□□ -0.49
SGCB-201ENST00000381431 SOSTDC1Q6X4U4 206 aa12□□□□□ -0.49
SGCB-201ENST00000381431 LYPD5Q6UWN5 251 aa12□□□□□ -0.49
SGCB-201ENST00000381431 IL17DQ8TAD2 202 aa11.99□□□□□ -0.49
SGCB-201ENST00000381431 HRCT1Q6UXD1 115 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 802.1 ms