RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 ABCA2Q9BZC7 2435 aa6.88□□□□□ -1.31
SNX1-202ENST00000380285 LINC00575Q6W349 94 aa6.88□□□□□ -1.31
SNX1-202ENST00000380285 PLAC8L1A1L4L8 177 aa6.88□□□□□ -1.31
SNX1-202ENST00000380285 CELA1Q9UNI1 258 aa6.87□□□□□ -1.31
SNX1-202ENST00000380285 LINC01006Q8NI28 216 aa6.87□□□□□ -1.31
SNX1-202ENST00000380285 A0A087WVE0 104 aa6.87□□□□□ -1.31
SNX1-202ENST00000380285 ESRGQ1W209 222 aa6.87□□□□□ -1.31
SNX1-202ENST00000380285 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
SNX1-202ENST00000380285 Q6ZVQ6 151 aa6.87□□□□□ -1.31
SNX1-202ENST00000380285 LINC01547P58512 204 aaPredicted RBP6.86□□□□□ -1.31
SNX1-202ENST00000380285 C10orf99Q6UWK7 81 aa6.86□□□□□ -1.31
SNX1-202ENST00000380285 NANOS2P60321 138 aaKnown RBP6.86□□□□□ -1.31
SNX1-202ENST00000380285 SPINK6Q6UWN8 80 aa6.86□□□□□ -1.31
SNX1-202ENST00000380285 TRBV7-6A0A0J9YX20 115 aa6.86□□□□□ -1.31
SNX1-202ENST00000380285 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
SNX1-202ENST00000380285 PRR4Q16378 134 aa6.86□□□□□ -1.31
SNX1-202ENST00000380285 ZNF843Q8N446 348 aa6.85□□□□□ -1.31
SNX1-202ENST00000380285 ODF3L2Q3SX64 289 aa6.85□□□□□ -1.31
SNX1-202ENST00000380285 PPDPFQ9H3Y8 114 aa6.85□□□□□ -1.31
SNX1-202ENST00000380285 LINC00846Q9NV44 126 aa6.85□□□□□ -1.31
SNX1-202ENST00000380285 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
SNX1-202ENST00000380285 HCG22E2RYF7 251 aa6.85□□□□□ -1.31
SNX1-202ENST00000380285 LINC00482Q8N8I6 264 aa6.85□□□□□ -1.31
SNX1-202ENST00000380285 FHL2Q14192 279 aa6.84□□□□□ -1.31
SNX1-202ENST00000380285 IGLV1-51P01701 117 aa6.84□□□□□ -1.31
SNX1-202ENST00000380285 SOSTDC1Q6X4U4 206 aa6.84□□□□□ -1.31
SNX1-202ENST00000380285 H0Y9P7 68 aa6.84□□□□□ -1.32
SNX1-202ENST00000380285 NAV2Q8IVL1 2488 aa6.83□□□□□ -1.32
SNX1-202ENST00000380285 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
SNX1-202ENST00000380285 SBSPONQ8IVN8 264 aa6.83□□□□□ -1.32
SNX1-202ENST00000380285 KIF25-AS1Q9Y6Z4 181 aa6.82□□□□□ -1.32
SNX1-202ENST00000380285 IGLV4-60A0A075B6I1 120 aa6.82□□□□□ -1.32
SNX1-202ENST00000380285 HIVEP3Q5T1R4 2406 aa6.82□□□□□ -1.32
SNX1-202ENST00000380285 H3BPC8 53 aa6.82□□□□□ -1.32
SNX1-202ENST00000380285 TP53AIP1Q9HCN2 124 aa6.81□□□□□ -1.32
SNX1-202ENST00000380285 PRO0461Q9UI25 63 aa6.81□□□□□ -1.32
SNX1-202ENST00000380285 IGLV5-45A0A087WSX0 123 aa6.81□□□□□ -1.32
SNX1-202ENST00000380285 NOTCH2Q04721 2471 aa6.81□□□□□ -1.32
SNX1-202ENST00000380285 IGLV9-49A0A0B4J1Y8 123 aa6.81□□□□□ -1.32
SNX1-202ENST00000380285 LINC00337Q8N6G1 96 aa6.81□□□□□ -1.32
SNX1-202ENST00000380285 C16orf95Q9H693 158 aa6.8□□□□□ -1.32
SNX1-202ENST00000380285 C18orf65Q6ZTR6 163 aa6.8□□□□□ -1.32
SNX1-202ENST00000380285 C9orf116Q5BN46 136 aaPredicted RBP6.79□□□□□ -1.32
SNX1-202ENST00000380285 Q9BRP9 147 aa6.79□□□□□ -1.32
SNX1-202ENST00000380285 Q8N2B8 174 aa6.79□□□□□ -1.32
SNX1-202ENST00000380285 PSPHP1O15172 72 aa6.79□□□□□ -1.32
SNX1-202ENST00000380285 FAM19A4Q96LR4 140 aa6.78□□□□□ -1.32
SNX1-202ENST00000380285 LOC110117498A0A087WWA1 95 aa6.78□□□□□ -1.32
SNX1-202ENST00000380285 PRM2P04554 102 aa6.78□□□□□ -1.32
SNX1-202ENST00000380285 DOPEY1Q5JWR5 2465 aa6.78□□□□□ -1.32
SNX1-202ENST00000380285 COL27A1Q8IZC6 1860 aaPredicted RBP6.78□□□□□ -1.32
SNX1-202ENST00000380285 EDN2P20800 178 aa6.78□□□□□ -1.32
SNX1-202ENST00000380285 INAFM1C9JVW0 142 aa6.78□□□□□ -1.32
SNX1-202ENST00000380285 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
SNX1-202ENST00000380285 NUPR2A6NF83 97 aa6.77□□□□□ -1.33
SNX1-202ENST00000380285 SMCPP49901 116 aaPredicted RBP6.77□□□□□ -1.33
SNX1-202ENST00000380285 C6orf223Q8N319 242 aa6.76□□□□□ -1.33
SNX1-202ENST00000380285 X6R8D5 127 aa6.76□□□□□ -1.33
SNX1-202ENST00000380285 GOLGB1Q14789 3259 aaKnown RBP6.76□□□□□ -1.33
SNX1-202ENST00000380285 CCDC168Q8NDH2 2452 aa6.76□□□□□ -1.33
SNX1-202ENST00000380285 PRO3102Q9H379 93 aa6.76□□□□□ -1.33
SNX1-202ENST00000380285 CD164Q04900 197 aa6.75□□□□□ -1.33
SNX1-202ENST00000380285 A0A087WSZ3 146 aa6.75□□□□□ -1.33
SNX1-202ENST00000380285 IGHV6-1A0A0B4J1U7 121 aa6.75□□□□□ -1.33
SNX1-202ENST00000380285 IGHV3OR16-9A0A0B4J2B5 98 aa6.75□□□□□ -1.33
SNX1-202ENST00000380285 Q6ZSN1 163 aa6.75□□□□□ -1.33
SNX1-202ENST00000380285 LY6G6DO95868 133 aa6.75□□□□□ -1.33
SNX1-202ENST00000380285 C1orf64Q8NEQ6 169 aa6.75□□□□□ -1.33
SNX1-202ENST00000380285 TLN1Q9Y490 2541 aaKnown RBP6.74□□□□□ -1.33
SNX1-202ENST00000380285 ERC2-IT1O76042 136 aa6.74□□□□□ -1.33
SNX1-202ENST00000380285 C11orf72Q8NBR9 251 aa6.74□□□□□ -1.33
SNX1-202ENST00000380285 SPATA3Q8NHX4 192 aa6.74□□□□□ -1.33
SNX1-202ENST00000380285 LINC00315P59091 139 aa6.74□□□□□ -1.33
SNX1-202ENST00000380285 PIEZO2Q9H5I5 2752 aa6.73□□□□□ -1.33
SNX1-202ENST00000380285 LYPD5Q6UWN5 251 aa6.72□□□□□ -1.33
SNX1-202ENST00000380285 PCNTO95613 3336 aa6.72□□□□□ -1.33
SNX1-202ENST00000380285 AVPP01185 164 aa6.72□□□□□ -1.33
SNX1-202ENST00000380285 CIRBP-AS1Q8TBR5 109 aa6.72□□□□□ -1.33
SNX1-202ENST00000380285 C4orf26Q17RF5 130 aa6.71□□□□□ -1.33
SNX1-202ENST00000380285 ACYP2P14621 99 aa6.71□□□□□ -1.34
SNX1-202ENST00000380285 Q6ZQT0 140 aa6.71□□□□□ -1.34
SNX1-202ENST00000380285 LRRK2Q5S007 2527 aa6.71□□□□□ -1.34
SNX1-202ENST00000380285 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
SNX1-202ENST00000380285 Q6ZTC4 211 aa6.7□□□□□ -1.34
SNX1-202ENST00000380285 PCSK5Q92824 1860 aa6.7□□□□□ -1.34
SNX1-202ENST00000380285 ELOF1P60002 83 aaKnown RBP6.7□□□□□ -1.34
SNX1-202ENST00000380285 SMIM29Q86T20 159 aa6.7□□□□□ -1.34
SNX1-202ENST00000380285 H3BNG1 76 aa6.69□□□□□ -1.34
SNX1-202ENST00000380285 MDFIQ99750 246 aa6.69□□□□□ -1.34
SNX1-202ENST00000380285 WDR87Q6ZQQ6 2873 aa6.69□□□□□ -1.34
SNX1-202ENST00000380285 Q6ZRU5 148 aa6.68□□□□□ -1.34
SNX1-202ENST00000380285 M0R2N4 97 aa6.67□□□□□ -1.34
SNX1-202ENST00000380285 KIAA0087Q14695 138 aa6.67□□□□□ -1.34
SNX1-202ENST00000380285 LINC01556Q5JQF7 62 aa6.67□□□□□ -1.34
SNX1-202ENST00000380285 A0A1B0GU69 56 aa6.67□□□□□ -1.34
SNX1-202ENST00000380285 H3BS24 57 aa6.67□□□□□ -1.34
SNX1-202ENST00000380285 KLK9Q2XQG4 91 aa6.67□□□□□ -1.34
SNX1-202ENST00000380285 Q8NBF4 154 aa6.66□□□□□ -1.34
SNX1-202ENST00000380285 SPINK1P00995 79 aa6.66□□□□□ -1.34
SNX1-202ENST00000380285 C22orf24Q9Y442 160 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms