RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 RHEBQ15382 184 aa15.21■□□□□ 0.03
TNFRSF4-201ENST00000379236 FABP9Q0Z7S8 132 aa15.2■□□□□ 0.02
TNFRSF4-201ENST00000379236 FA2HQ7L5A8 372 aa15.2■□□□□ 0.02
TNFRSF4-201ENST00000379236 Q8IZM0 81 aa15.2■□□□□ 0.02
TNFRSF4-201ENST00000379236 MRPL18Q9H0U6 180 aaKnown RBP15.2■□□□□ 0.02
TNFRSF4-201ENST00000379236 CDKN2A-AS1Q9UH64 79 aa15.19■□□□□ 0.02
TNFRSF4-201ENST00000379236 UBE2BP63146 152 aa15.18■□□□□ 0.02
TNFRSF4-201ENST00000379236 LINC00469Q8N7U9 141 aa15.18■□□□□ 0.02
TNFRSF4-201ENST00000379236 TNXBP22105 4242 aa15.17■□□□□ 0.02
TNFRSF4-201ENST00000379236 M0QXV9 152 aa15.17■□□□□ 0.02
TNFRSF4-201ENST00000379236 CARHSP1Q9Y2V2 147 aaKnown RBP15.17■□□□□ 0.02
TNFRSF4-201ENST00000379236 C10orf91Q5T1B1 145 aa15.16■□□□□ 0.02
TNFRSF4-201ENST00000379236 LINC01546A6NGU7 62 aa15.13■□□□□ 0.01
TNFRSF4-201ENST00000379236 F8VRH5 84 aa15.13■□□□□ 0.01
TNFRSF4-201ENST00000379236 CXCL5P42830 114 aa15.13■□□□□ 0.01
TNFRSF4-201ENST00000379236 TINCRA0A1B0GVN0 87 aa15.12■□□□□ 0.01
TNFRSF4-201ENST00000379236 C9orf129Q5T035 196 aaKnown RBP15.12■□□□□ 0.01
TNFRSF4-201ENST00000379236 IGLV7-43P04211 117 aa15.11■□□□□ 0.01
TNFRSF4-201ENST00000379236 PMVKQ15126 192 aa15.1■□□□□ 0.01
TNFRSF4-201ENST00000379236 DIRC1Q969H9 104 aa15.1■□□□□ 0.01
TNFRSF4-201ENST00000379236 NDUFA5Q16718 116 aa15.09■□□□□ 0.01
TNFRSF4-201ENST00000379236 PDZD11Q5EBL8 140 aa15.09■□□□□ 0.01
TNFRSF4-201ENST00000379236 CST9LQ9H4G1 147 aa15.09■□□□□ 0.01
TNFRSF4-201ENST00000379236 TRAPPC1Q9Y5R8 145 aa15.09■□□□□ 0.01
TNFRSF4-201ENST00000379236 SMIM1B2RUZ4 78 aa15.08■□□□□ 0
TNFRSF4-201ENST00000379236 COX7B2Q8TF08 81 aa15.08■□□□□ 0
TNFRSF4-201ENST00000379236 APOC3P02656 99 aa15.07■□□□□ 0
TNFRSF4-201ENST00000379236 KRTAP10-8P60410 259 aa15.07■□□□□ 0
TNFRSF4-201ENST00000379236 KRTAP11-1Q8IUC1 163 aa15.06■□□□□ 0
TNFRSF4-201ENST00000379236 KRTAP7-1Q8IUC3 87 aa15.06■□□□□ 0
TNFRSF4-201ENST00000379236 XAGE1AQ9HD64 81 aa15.06■□□□□ 0
TNFRSF4-201ENST00000379236 IGLV5-45A0A087WSX0 123 aa15.05■□□□□ -0
TNFRSF4-201ENST00000379236 H3BRM9 83 aa15.05■□□□□ -0
TNFRSF4-201ENST00000379236 NDUFA6P56556 154 aa15.05■□□□□ -0
TNFRSF4-201ENST00000379236 SNAPINO95295 136 aa15.04■□□□□ -0
TNFRSF4-201ENST00000379236 SPINK8P0C7L1 97 aa15.04■□□□□ -0
TNFRSF4-201ENST00000379236 LBHQ53QV2 105 aaPredicted RBP15.03■□□□□ -0
TNFRSF4-201ENST00000379236 SVBPQ8N300 66 aa15.03■□□□□ -0
TNFRSF4-201ENST00000379236 H0Y9J4 135 aa15.02■□□□□ -0
TNFRSF4-201ENST00000379236 LINC00614P0C842 121 aa15.02■□□□□ -0
TNFRSF4-201ENST00000379236 ODF1Q14990 250 aa15.01□□□□□ -0.01
TNFRSF4-201ENST00000379236 C18orf32Q8TCD1 76 aa15.01□□□□□ -0.01
TNFRSF4-201ENST00000379236 C22orf24Q9Y442 160 aa15.01□□□□□ -0.01
TNFRSF4-201ENST00000379236 HBDP02042 147 aa15□□□□□ -0.01
TNFRSF4-201ENST00000379236 RAB5BP61020 215 aa15□□□□□ -0.01
TNFRSF4-201ENST00000379236 UBR4Q5T4S7 5183 aa14.99□□□□□ -0.01
TNFRSF4-201ENST00000379236 NUPR1O60356 82 aa14.97□□□□□ -0.01
TNFRSF4-201ENST00000379236 ATP5LO75964 103 aa14.97□□□□□ -0.01
TNFRSF4-201ENST00000379236 IGLC3P0DOY3 106 aa14.96□□□□□ -0.01
TNFRSF4-201ENST00000379236 PMCHL1Q16048 86 aa14.96□□□□□ -0.01
TNFRSF4-201ENST00000379236 MRPL55Q7Z7F7 128 aaKnown RBP14.95□□□□□ -0.02
TNFRSF4-201ENST00000379236 TP73-AS1Q9UF72 201 aa14.95□□□□□ -0.02
TNFRSF4-201ENST00000379236 A0A096LNJ9 63 aa14.94□□□□□ -0.02
TNFRSF4-201ENST00000379236 URB1-AS1Q96HZ7 61 aa14.94□□□□□ -0.02
TNFRSF4-201ENST00000379236 PRR26Q8N8Z3 221 aa14.93□□□□□ -0.02
TNFRSF4-201ENST00000379236 ZNF22P17026 224 aaPredicted RBP14.9□□□□□ -0.02
TNFRSF4-201ENST00000379236 BAGE3Q86Y29 109 aa14.9□□□□□ -0.02
TNFRSF4-201ENST00000379236 NKAPP1Q8N9T2 125 aa14.9□□□□□ -0.02
TNFRSF4-201ENST00000379236 IGLV1-50A0A075B6I6 118 aa14.89□□□□□ -0.03
TNFRSF4-201ENST00000379236 ZNF861PO60384 105 aa14.89□□□□□ -0.03
TNFRSF4-201ENST00000379236 PFN2P35080 140 aa14.88□□□□□ -0.03
TNFRSF4-201ENST00000379236 TMEM170BQ5T4T1 132 aa14.88□□□□□ -0.03
TNFRSF4-201ENST00000379236 IGLV5-39A0A0G2JS06 123 aa14.87□□□□□ -0.03
TNFRSF4-201ENST00000379236 RPL37AP8A6NKH3 93 aa14.86□□□□□ -0.03
TNFRSF4-201ENST00000379236 LINC00167Q96N53 147 aa14.86□□□□□ -0.03
TNFRSF4-201ENST00000379236 GAGE10A6NGK3 116 aa14.85□□□□□ -0.03
TNFRSF4-201ENST00000379236 RPL28P46779 137 aaKnown RBP14.85□□□□□ -0.03
TNFRSF4-201ENST00000379236 C11orf86A6NJI1 115 aa14.84□□□□□ -0.03
TNFRSF4-201ENST00000379236 RPL13AP40429 203 aaKnown RBP14.84□□□□□ -0.03
TNFRSF4-201ENST00000379236 CHCHD1Q96BP2 118 aaKnown RBP14.84□□□□□ -0.03
TNFRSF4-201ENST00000379236 CHTOPQ9Y3Y2 248 aaKnown RBP14.84□□□□□ -0.03
TNFRSF4-201ENST00000379236 BCE1O60756 84 aa14.83□□□□□ -0.04
TNFRSF4-201ENST00000379236 KRTAP1-4P0C5Y4 121 aa14.83□□□□□ -0.04
TNFRSF4-201ENST00000379236 SFTA2Q6UW10 78 aa14.83□□□□□ -0.04
TNFRSF4-201ENST00000379236 ERG28Q9UKR5 140 aa14.83□□□□□ -0.04
TNFRSF4-201ENST00000379236 LRP2P98164 4655 aa14.83□□□□□ -0.04
TNFRSF4-201ENST00000379236 IGLV5-37A0A075B6J1 123 aa14.81□□□□□ -0.04
TNFRSF4-201ENST00000379236 ZNF625Q96I27 306 aaPredicted RBP14.81□□□□□ -0.04
TNFRSF4-201ENST00000379236 COX17Q14061 63 aa14.8□□□□□ -0.04
TNFRSF4-201ENST00000379236 YPEL4Q96NS1 127 aa14.8□□□□□ -0.04
TNFRSF4-201ENST00000379236 IFI27L1Q96BM0 104 aa14.78□□□□□ -0.04
TNFRSF4-201ENST00000379236 HSBP1O75506 76 aa14.77□□□□□ -0.05
TNFRSF4-201ENST00000379236 UBE2AP49459 152 aa14.77□□□□□ -0.05
TNFRSF4-201ENST00000379236 RPL24P83731 157 aaKnown RBP14.77□□□□□ -0.05
TNFRSF4-201ENST00000379236 CBLN2Q8IUK8 224 aa14.77□□□□□ -0.05
TNFRSF4-201ENST00000379236 SND1-IT1Q9HBX3 110 aa14.77□□□□□ -0.05
TNFRSF4-201ENST00000379236 IGKV2-28A0A075B6P5 120 aa14.75□□□□□ -0.05
TNFRSF4-201ENST00000379236 TRAV12-1A0A0B4J245 112 aa14.75□□□□□ -0.05
TNFRSF4-201ENST00000379236 IGKV2D-28P01615 120 aa14.75□□□□□ -0.05
TNFRSF4-201ENST00000379236 SCO1O75880 301 aa14.73□□□□□ -0.05
TNFRSF4-201ENST00000379236 LINC00158P58513 81 aa14.72□□□□□ -0.05
TNFRSF4-201ENST00000379236 TMEM223A0PJW6 202 aa14.71□□□□□ -0.05
TNFRSF4-201ENST00000379236 VPREB1P12018 145 aa14.71□□□□□ -0.05
TNFRSF4-201ENST00000379236 FAM19A2Q8N3H0 131 aa14.7□□□□□ -0.06
TNFRSF4-201ENST00000379236 H0Y8G0 127 aa14.69□□□□□ -0.06
TNFRSF4-201ENST00000379236 ATP6V1G1O75348 118 aa14.69□□□□□ -0.06
TNFRSF4-201ENST00000379236 TRGC2P03986 189 aa14.68□□□□□ -0.06
TNFRSF4-201ENST00000379236 A0A0U1RRA0 63 aa14.67□□□□□ -0.06
TNFRSF4-201ENST00000379236 CRYGAP11844 174 aa14.67□□□□□ -0.06
TNFRSF4-201ENST00000379236 MEIG1Q5JSS6 88 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms