RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 A0A087WVE0 104 aa12.53□□□□□ -0.4
GNE-201ENST00000377902 LINC00959A0A1B0GUT2 108 aa12.53□□□□□ -0.4
GNE-201ENST00000377902 UQCRQO14949 82 aa12.53□□□□□ -0.4
GNE-201ENST00000377902 CXCL5P42830 114 aa12.53□□□□□ -0.4
GNE-201ENST00000377902 C6orf226Q5I0X4 101 aa12.53□□□□□ -0.4
GNE-201ENST00000377902 C19orf73Q9NVV2 129 aa12.53□□□□□ -0.4
GNE-201ENST00000377902 MTORP42345 2549 aa12.52□□□□□ -0.41
GNE-201ENST00000377902 A0A096LPF7 62 aa12.52□□□□□ -0.41
GNE-201ENST00000377902 C2orf48Q96LS8 159 aa12.52□□□□□ -0.41
GNE-201ENST00000377902 ACANP16112 2415 aa12.51□□□□□ -0.41
GNE-201ENST00000377902 H0YGX0 51 aa12.51□□□□□ -0.41
GNE-201ENST00000377902 KRTAP1-3Q8IUG1 177 aa12.51□□□□□ -0.41
GNE-201ENST00000377902 OVOL2Q9BRP0 275 aa12.51□□□□□ -0.41
GNE-201ENST00000377902 CYSTM1Q9H1C7 97 aa12.51□□□□□ -0.41
GNE-201ENST00000377902 LINC00526Q96FQ7 95 aa12.5□□□□□ -0.41
GNE-201ENST00000377902 OBSCN-AS1Q96MR7 158 aa12.5□□□□□ -0.41
GNE-201ENST00000377902 SS18Q15532 418 aa12.49□□□□□ -0.41
GNE-201ENST00000377902 USP24Q9UPU5 2620 aa12.49□□□□□ -0.41
GNE-201ENST00000377902 COX7CP15954 63 aa12.48□□□□□ -0.41
GNE-201ENST00000377902 HIST1H4AP62805 103 aaKnown RBP12.48□□□□□ -0.41
GNE-201ENST00000377902 BBC3Q96PG8 261 aaPredicted RBP12.48□□□□□ -0.41
GNE-201ENST00000377902 LOC107984640A0A0U1RRK4 108 aa12.48□□□□□ -0.41
GNE-201ENST00000377902 WFDC11Q8NEX6 87 aa12.47□□□□□ -0.41
GNE-201ENST00000377902 hADV29S1A0JD25 119 aa12.46□□□□□ -0.42
GNE-201ENST00000377902 GYPEP15421 78 aa12.45□□□□□ -0.42
GNE-201ENST00000377902 LINC01006Q8NI28 216 aa12.45□□□□□ -0.42
GNE-201ENST00000377902 IGLV1-51P01701 117 aa12.44□□□□□ -0.42
GNE-201ENST00000377902 NANOS2P60321 138 aaKnown RBP12.44□□□□□ -0.42
GNE-201ENST00000377902 A0A1B0GX51 115 aa12.44□□□□□ -0.42
GNE-201ENST00000377902 LINC01561Q8N1V8 128 aa12.44□□□□□ -0.42
GNE-201ENST00000377902 Q8N3U1 123 aa12.44□□□□□ -0.42
GNE-201ENST00000377902 ORMDL1Q9P0S3 153 aa12.44□□□□□ -0.42
GNE-201ENST00000377902 LY6G6DO95868 133 aa12.43□□□□□ -0.42
GNE-201ENST00000377902 TMEM86BQ8N661 226 aa12.43□□□□□ -0.42
GNE-201ENST00000377902 C9orf116Q5BN46 136 aaPredicted RBP12.43□□□□□ -0.42
GNE-201ENST00000377902 WFDC9Q8NEX5 89 aa12.42□□□□□ -0.42
GNE-201ENST00000377902 ATOX1O00244 68 aa12.42□□□□□ -0.42
GNE-201ENST00000377902 RPL18AQ02543 176 aaKnown RBP12.42□□□□□ -0.42
GNE-201ENST00000377902 IGLV10-54A0A075B6I4 117 aa12.41□□□□□ -0.42
GNE-201ENST00000377902 Q6JHZ5 121 aa12.41□□□□□ -0.42
GNE-201ENST00000377902 RNASE1P07998 156 aaKnown RBP12.4□□□□□ -0.42
GNE-201ENST00000377902 HILS1P60008 231 aa12.39□□□□□ -0.43
GNE-201ENST00000377902 Q8NDZ9 215 aa12.39□□□□□ -0.43
GNE-201ENST00000377902 CRYGAP11844 174 aa12.39□□□□□ -0.43
GNE-201ENST00000377902 CFAP161Q6P656 301 aa12.38□□□□□ -0.43
GNE-201ENST00000377902 Q8IZM0 81 aa12.38□□□□□ -0.43
GNE-201ENST00000377902 LINC00269Q8N2A0 174 aa12.38□□□□□ -0.43
GNE-201ENST00000377902 Q8N814 137 aa12.38□□□□□ -0.43
GNE-201ENST00000377902 CCKP06307 115 aa12.37□□□□□ -0.43
GNE-201ENST00000377902 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
GNE-201ENST00000377902 VWFP04275 2813 aa12.37□□□□□ -0.43
GNE-201ENST00000377902 ANK3Q12955 4377 aaKnown RBP12.36□□□□□ -0.43
GNE-201ENST00000377902 USP17L23D6RBM5 183 aa12.36□□□□□ -0.43
GNE-201ENST00000377902 DEFB4AO15263 64 aa12.36□□□□□ -0.43
GNE-201ENST00000377902 KIAA0087Q14695 138 aa12.35□□□□□ -0.43
GNE-201ENST00000377902 A0A1B0GUV1 79 aa12.34□□□□□ -0.43
GNE-201ENST00000377902 KIR2DL5BQ8NHK3 375 aa12.33□□□□□ -0.43
GNE-201ENST00000377902 C6orf99Q4VX62 202 aa12.33□□□□□ -0.44
GNE-201ENST00000377902 ZNF843Q8N446 348 aa12.33□□□□□ -0.44
GNE-201ENST00000377902 LINC00167Q96N53 147 aa12.33□□□□□ -0.44
GNE-201ENST00000377902 FAM19A1Q7Z5A9 133 aa12.32□□□□□ -0.44
GNE-201ENST00000377902 SERP2Q8N6R1 65 aa12.32□□□□□ -0.44
GNE-201ENST00000377902 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
GNE-201ENST00000377902 CHCHD10Q8WYQ3 142 aaPredicted RBP12.31□□□□□ -0.44
GNE-201ENST00000377902 X6R8D5 127 aa12.31□□□□□ -0.44
GNE-201ENST00000377902 ANGP03950 147 aaKnown RBP12.3□□□□□ -0.44
GNE-201ENST00000377902 C6orf223Q8N319 242 aa12.3□□□□□ -0.44
GNE-201ENST00000377902 TRAV23DV6A0A075B6W5 121 aa12.3□□□□□ -0.44
GNE-201ENST00000377902 ENHOQ6UWT2 76 aa12.3□□□□□ -0.44
GNE-201ENST00000377902 PRO0255Q9UI72 69 aa12.3□□□□□ -0.44
GNE-201ENST00000377902 TMEM256-PLSCR3K7ERE1 68 aa12.29□□□□□ -0.44
GNE-201ENST00000377902 LINC00612Q8N6U2 182 aa12.29□□□□□ -0.44
GNE-201ENST00000377902 C10orf25Q5T742 122 aa12.29□□□□□ -0.44
GNE-201ENST00000377902 LINC00482Q8N8I6 264 aa12.29□□□□□ -0.44
GNE-201ENST00000377902 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
GNE-201ENST00000377902 CD164L2Q6UWJ8 174 aa12.28□□□□□ -0.44
GNE-201ENST00000377902 JMJD7-PLA2G4BH0Y9G9 81 aa12.28□□□□□ -0.44
GNE-201ENST00000377902 FAM19A5Q7Z5A7 132 aaPredicted RBP12.28□□□□□ -0.44
GNE-201ENST00000377902 TENM4Q6N022 2769 aa12.28□□□□□ -0.44
GNE-201ENST00000377902 PDZD2O15018 2839 aa12.28□□□□□ -0.44
GNE-201ENST00000377902 ITPR2Q14571 2701 aa12.27□□□□□ -0.44
GNE-201ENST00000377902 J3KT08 172 aa12.27□□□□□ -0.45
GNE-201ENST00000377902 M0R2N4 97 aa12.27□□□□□ -0.45
GNE-201ENST00000377902 REG3AQ06141 175 aa12.27□□□□□ -0.45
GNE-201ENST00000377902 KRTAP1-1Q07627 177 aa12.26□□□□□ -0.45
GNE-201ENST00000377902 C16orf95Q9H693 158 aa12.26□□□□□ -0.45
GNE-201ENST00000377902 NDUFC2O95298 119 aa12.26□□□□□ -0.45
GNE-201ENST00000377902 UNQ6190/PRO20217Q6UXQ8 127 aa12.26□□□□□ -0.45
GNE-201ENST00000377902 KRTAP10-3P60369 221 aa12.25□□□□□ -0.45
GNE-201ENST00000377902 S100A7L2Q5SY68 101 aa12.25□□□□□ -0.45
GNE-201ENST00000377902 DSCR8Q96T75 97 aa12.25□□□□□ -0.45
GNE-201ENST00000377902 GHRHP01286 108 aa12.24□□□□□ -0.45
GNE-201ENST00000377902 COX17Q14061 63 aa12.24□□□□□ -0.45
GNE-201ENST00000377902 LINC00575Q6W349 94 aa12.23□□□□□ -0.45
GNE-201ENST00000377902 OXTP01178 125 aa12.22□□□□□ -0.45
GNE-201ENST00000377902 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
GNE-201ENST00000377902 DPH3Q96FX2 82 aa12.22□□□□□ -0.45
GNE-201ENST00000377902 IGHV4-28A0A0C4DH34 117 aa12.22□□□□□ -0.45
GNE-201ENST00000377902 HIVEP2P31629 2446 aa12.2□□□□□ -0.46
GNE-201ENST00000377902 UBL5Q9BZL1 73 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms