RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 LOC389332A0A1B0GUA5 103 aa10.41□□□□□ -0.74
HLA-A-201ENST00000376802 COLCA2A8K830 154 aa10.41□□□□□ -0.74
HLA-A-201ENST00000376802 PACRGQ96M98 296 aaPredicted RBP10.41□□□□□ -0.74
HLA-A-201ENST00000376802 AMELXQ99217 191 aa10.41□□□□□ -0.74
HLA-A-201ENST00000376802 MUC2Q02817 5179 aa10.4□□□□□ -0.75
HLA-A-201ENST00000376802 C2orf66Q6UXQ4 117 aa10.39□□□□□ -0.75
HLA-A-201ENST00000376802 LAMTOR2Q9Y2Q5 125 aa10.39□□□□□ -0.75
HLA-A-201ENST00000376802 ZNF861PO60384 105 aa10.38□□□□□ -0.75
HLA-A-201ENST00000376802 RPL13AP40429 203 aaKnown RBP10.38□□□□□ -0.75
HLA-A-201ENST00000376802 FAM19A3Q7Z5A8 133 aa10.38□□□□□ -0.75
HLA-A-201ENST00000376802 Q8N8P6 123 aa10.38□□□□□ -0.75
HLA-A-201ENST00000376802 CYSLTR1Q9Y271 337 aa10.38□□□□□ -0.75
HLA-A-201ENST00000376802 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
HLA-A-201ENST00000376802 Q6ZN92 141 aa10.37□□□□□ -0.75
HLA-A-201ENST00000376802 LINC00469Q8N7U9 141 aa10.37□□□□□ -0.75
HLA-A-201ENST00000376802 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
HLA-A-201ENST00000376802 VCX2Q9H322 139 aa10.37□□□□□ -0.75
HLA-A-201ENST00000376802 MAP1LC3AQ9H492 121 aa10.37□□□□□ -0.75
HLA-A-201ENST00000376802 C22orf24Q9Y442 160 aa10.37□□□□□ -0.75
HLA-A-201ENST00000376802 PRR4Q16378 134 aa10.36□□□□□ -0.75
HLA-A-201ENST00000376802 COX19Q49B96 90 aa10.36□□□□□ -0.75
HLA-A-201ENST00000376802 Q8IZM0 81 aa10.36□□□□□ -0.75
HLA-A-201ENST00000376802 TOMM7Q9P0U1 55 aa10.36□□□□□ -0.75
HLA-A-201ENST00000376802 NPSP0C0P6 89 aa10.35□□□□□ -0.75
HLA-A-201ENST00000376802 CKS1BP61024 79 aa10.35□□□□□ -0.75
HLA-A-201ENST00000376802 C6orf226Q5I0X4 101 aa10.35□□□□□ -0.75
HLA-A-201ENST00000376802 XAGE1AQ9HD64 81 aa10.35□□□□□ -0.75
HLA-A-201ENST00000376802 PRSS2P07478 247 aa10.34□□□□□ -0.75
HLA-A-201ENST00000376802 ORMDL2Q53FV1 153 aa10.33□□□□□ -0.76
HLA-A-201ENST00000376802 ALKBH7Q9BT30 221 aaPredicted RBP10.33□□□□□ -0.76
HLA-A-201ENST00000376802 CDKN2A-AS1Q9UH64 79 aa10.33□□□□□ -0.76
HLA-A-201ENST00000376802 NUPR1O60356 82 aa10.33□□□□□ -0.76
HLA-A-201ENST00000376802 GNB1LQ9BYB4 327 aa10.33□□□□□ -0.76
HLA-A-201ENST00000376802 K7EMI3 77 aa10.32□□□□□ -0.76
HLA-A-201ENST00000376802 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
HLA-A-201ENST00000376802 F8VRH5 84 aa10.31□□□□□ -0.76
HLA-A-201ENST00000376802 SMCPP49901 116 aaPredicted RBP10.31□□□□□ -0.76
HLA-A-201ENST00000376802 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
HLA-A-201ENST00000376802 A0A087X002 238 aa10.3□□□□□ -0.76
HLA-A-201ENST00000376802 HERVK_113P63121 156 aa10.3□□□□□ -0.76
HLA-A-201ENST00000376802 MRPL55Q7Z7F7 128 aaKnown RBP10.3□□□□□ -0.76
HLA-A-201ENST00000376802 NXT2Q9NPJ8 142 aaKnown RBP10.3□□□□□ -0.76
HLA-A-201ENST00000376802 TSPAN13O95857 204 aa10.28□□□□□ -0.76
HLA-A-201ENST00000376802 SEC11AP67812 179 aa10.28□□□□□ -0.76
HLA-A-201ENST00000376802 TOMM6Q96B49 74 aa10.28□□□□□ -0.76
HLA-A-201ENST00000376802 TIMM17AQ99595 171 aa10.28□□□□□ -0.76
HLA-A-201ENST00000376802 BCE1O60756 84 aa10.27□□□□□ -0.77
HLA-A-201ENST00000376802 GEMIN7Q9H840 131 aaKnown RBP10.27□□□□□ -0.77
HLA-A-201ENST00000376802 SMIM1B2RUZ4 78 aa10.26□□□□□ -0.77
HLA-A-201ENST00000376802 RPL28P46779 137 aaKnown RBP10.26□□□□□ -0.77
HLA-A-201ENST00000376802 PAPPA-AS1Q5QFB9 102 aa10.26□□□□□ -0.77
HLA-A-201ENST00000376802 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
HLA-A-201ENST00000376802 TRAPPC1Q9Y5R8 145 aa10.26□□□□□ -0.77
HLA-A-201ENST00000376802 RPL37AP8A6NKH3 93 aa10.25□□□□□ -0.77
HLA-A-201ENST00000376802 TRGC2P03986 189 aa10.25□□□□□ -0.77
HLA-A-201ENST00000376802 MRPL18Q9H0U6 180 aaKnown RBP10.25□□□□□ -0.77
HLA-A-201ENST00000376802 CXCL5P42830 114 aa10.24□□□□□ -0.77
HLA-A-201ENST00000376802 ERASQ7Z444 233 aa10.24□□□□□ -0.77
HLA-A-201ENST00000376802 ANAPC11Q9NYG5 84 aa10.24□□□□□ -0.77
HLA-A-201ENST00000376802 IGLV5-45A0A087WSX0 123 aa10.23□□□□□ -0.77
HLA-A-201ENST00000376802 G0S2P27469 103 aa10.23□□□□□ -0.77
HLA-A-201ENST00000376802 RAB5BP61020 215 aa10.23□□□□□ -0.77
HLA-A-201ENST00000376802 FABP9Q0Z7S8 132 aa10.23□□□□□ -0.77
HLA-A-201ENST00000376802 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
HLA-A-201ENST00000376802 TINCRA0A1B0GVN0 87 aa10.22□□□□□ -0.77
HLA-A-201ENST00000376802 CRYGAP11844 174 aa10.22□□□□□ -0.77
HLA-A-201ENST00000376802 PDZD11Q5EBL8 140 aa10.22□□□□□ -0.77
HLA-A-201ENST00000376802 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
HLA-A-201ENST00000376802 TYMSOSQ8TAI1 123 aa10.22□□□□□ -0.77
HLA-A-201ENST00000376802 COX7B2Q8TF08 81 aa10.22□□□□□ -0.77
HLA-A-201ENST00000376802 GAGE10A6NGK3 116 aa10.21□□□□□ -0.78
HLA-A-201ENST00000376802 KRTAP13-2Q52LG2 175 aa10.21□□□□□ -0.78
HLA-A-201ENST00000376802 SCGB3A1Q96QR1 104 aa10.21□□□□□ -0.78
HLA-A-201ENST00000376802 IGLV5-37A0A075B6J1 123 aa10.2□□□□□ -0.78
HLA-A-201ENST00000376802 LCE2AQ5TA79 106 aaPredicted RBP10.2□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BKO60814 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BJP06899 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BOP23527 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BBP33778 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BDP58876 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BCP62807 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST2H2BEQ16778 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BHQ93079 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BNQ99877 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 HIST1H2BMQ99879 126 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 CST9LQ9H4G1 147 aa10.19□□□□□ -0.78
HLA-A-201ENST00000376802 LINC01546A6NGU7 62 aa10.18□□□□□ -0.78
HLA-A-201ENST00000376802 SPINK8P0C7L1 97 aa10.17□□□□□ -0.78
HLA-A-201ENST00000376802 TMA7Q9Y2S6 64 aaKnown RBP10.17□□□□□ -0.78
HLA-A-201ENST00000376802 COA6Q5JTJ3 125 aaKnown RBP10.15□□□□□ -0.78
HLA-A-201ENST00000376802 A0A0U1RQV1 116 aa10.14□□□□□ -0.79
HLA-A-201ENST00000376802 UBE2AP49459 152 aa10.14□□□□□ -0.79
HLA-A-201ENST00000376802 LINC01549A6NIU2 74 aa10.13□□□□□ -0.79
HLA-A-201ENST00000376802 FAM229BQ4G0N7 80 aa10.13□□□□□ -0.79
HLA-A-201ENST00000376802 NKAPP1Q8N9T2 125 aa10.13□□□□□ -0.79
HLA-A-201ENST00000376802 RETNLBQ9BQ08 111 aa10.13□□□□□ -0.79
HLA-A-201ENST00000376802 IGKV2-28A0A075B6P5 120 aa10.12□□□□□ -0.79
HLA-A-201ENST00000376802 IGKV2D-28P01615 120 aa10.12□□□□□ -0.79
HLA-A-201ENST00000376802 S100A6P06703 90 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms