RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 C16orf74Q96GX8 76 aa11.48□□□□□ -0.57
TRIM39-201ENST00000376656 PKD1L2Q7Z442 2459 aa11.48□□□□□ -0.57
TRIM39-201ENST00000376656 OXTP01178 125 aa11.48□□□□□ -0.57
TRIM39-201ENST00000376656 EPG5Q9HCE0 2579 aa11.48□□□□□ -0.57
TRIM39-201ENST00000376656 RPL35AP18077 110 aaKnown RBP11.47□□□□□ -0.57
TRIM39-201ENST00000376656 NANOS2P60321 138 aaKnown RBP11.47□□□□□ -0.57
TRIM39-201ENST00000376656 XCL1P47992 114 aa11.46□□□□□ -0.57
TRIM39-201ENST00000376656 FHL2Q14192 279 aa11.46□□□□□ -0.57
TRIM39-201ENST00000376656 LINC00167Q96N53 147 aa11.46□□□□□ -0.58
TRIM39-201ENST00000376656 FAM19A1Q7Z5A9 133 aa11.45□□□□□ -0.58
TRIM39-201ENST00000376656 Q8N814 137 aa11.45□□□□□ -0.58
TRIM39-201ENST00000376656 TRAV23DV6A0A075B6W5 121 aa11.44□□□□□ -0.58
TRIM39-201ENST00000376656 TMEM86BQ8N661 226 aa11.43□□□□□ -0.58
TRIM39-201ENST00000376656 CCL24O00175 119 aa11.43□□□□□ -0.58
TRIM39-201ENST00000376656 GHRHP01286 108 aa11.43□□□□□ -0.58
TRIM39-201ENST00000376656 CLPSL2Q6UWE3 100 aa11.43□□□□□ -0.58
TRIM39-201ENST00000376656 MYO18BQ8IUG5 2567 aa11.43□□□□□ -0.58
TRIM39-201ENST00000376656 JMJD7-PLA2G4BH0Y9G9 81 aa11.43□□□□□ -0.58
TRIM39-201ENST00000376656 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
TRIM39-201ENST00000376656 NF1P21359 2839 aa11.42□□□□□ -0.58
TRIM39-201ENST00000376656 LRRK2Q5S007 2527 aa11.41□□□□□ -0.58
TRIM39-201ENST00000376656 S100A7L2Q5SY68 101 aa11.41□□□□□ -0.58
TRIM39-201ENST00000376656 ACACBO00763 2458 aa11.41□□□□□ -0.58
TRIM39-201ENST00000376656 RNASE1P07998 156 aaKnown RBP11.41□□□□□ -0.58
TRIM39-201ENST00000376656 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
TRIM39-201ENST00000376656 Q8IZM0 81 aa11.4□□□□□ -0.58
TRIM39-201ENST00000376656 CSNK1G2-AS1Q8NCQ2 148 aa11.4□□□□□ -0.58
TRIM39-201ENST00000376656 SETD2Q9BYW2 2564 aaPredicted RBP11.39□□□□□ -0.59
TRIM39-201ENST00000376656 SONP18583 2426 aaKnown RBP11.39□□□□□ -0.59
TRIM39-201ENST00000376656 FAM208BQ5VWN6 2430 aa11.39□□□□□ -0.59
TRIM39-201ENST00000376656 PTPN13Q12923 2485 aa11.39□□□□□ -0.59
TRIM39-201ENST00000376656 ATP5EP2Q5VTU8 51 aa11.38□□□□□ -0.59
TRIM39-201ENST00000376656 LYPD5Q6UWN5 251 aa11.38□□□□□ -0.59
TRIM39-201ENST00000376656 NAV2Q8IVL1 2488 aa11.38□□□□□ -0.59
TRIM39-201ENST00000376656 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
TRIM39-201ENST00000376656 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
TRIM39-201ENST00000376656 ZNF469Q96JG9 3925 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-201ENST00000376656 C19orf73Q9NVV2 129 aa11.36□□□□□ -0.59
TRIM39-201ENST00000376656 ABCA12Q86UK0 2595 aa11.36□□□□□ -0.59
TRIM39-201ENST00000376656 IGSF10Q6WRI0 2623 aa11.36□□□□□ -0.59
TRIM39-201ENST00000376656 C4orf26Q17RF5 130 aa11.36□□□□□ -0.59
TRIM39-201ENST00000376656 Q8NDZ9 215 aa11.36□□□□□ -0.59
TRIM39-201ENST00000376656 C6orf99Q4VX62 202 aa11.35□□□□□ -0.59
TRIM39-201ENST00000376656 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
TRIM39-201ENST00000376656 UBL5Q9BZL1 73 aa11.35□□□□□ -0.59
TRIM39-201ENST00000376656 GYPEP15421 78 aa11.35□□□□□ -0.59
TRIM39-201ENST00000376656 A0A096LPF7 62 aa11.34□□□□□ -0.59
TRIM39-201ENST00000376656 KRTAP10-9P60411 292 aa11.34□□□□□ -0.59
TRIM39-201ENST00000376656 C20orf197Q8N268 126 aa11.34□□□□□ -0.59
TRIM39-201ENST00000376656 NDUFC2O95298 119 aa11.34□□□□□ -0.59
TRIM39-201ENST00000376656 FN1P02751 2386 aaKnown RBP11.34□□□□□ -0.59
TRIM39-201ENST00000376656 KIAA0087Q14695 138 aa11.34□□□□□ -0.59
TRIM39-201ENST00000376656 Q5XG85 94 aa11.33□□□□□ -0.6
TRIM39-201ENST00000376656 CACNA1AO00555 2505 aa11.32□□□□□ -0.6
TRIM39-201ENST00000376656 A0A1B0GUV1 79 aa11.32□□□□□ -0.6
TRIM39-201ENST00000376656 DNAJC9-AS1A6NH13 148 aa11.32□□□□□ -0.6
TRIM39-201ENST00000376656 M0R2N4 97 aa11.32□□□□□ -0.6
TRIM39-201ENST00000376656 TRBV10-3A0A0K0K1G6 114 aa11.31□□□□□ -0.6
TRIM39-201ENST00000376656 CMC4P56277 68 aaPredicted RBP11.31□□□□□ -0.6
TRIM39-201ENST00000376656 Q6ZQT0 140 aa11.3□□□□□ -0.6
TRIM39-201ENST00000376656 IGLV10-54A0A075B6I4 117 aa11.3□□□□□ -0.6
TRIM39-201ENST00000376656 HRCT1Q6UXD1 115 aa11.3□□□□□ -0.6
TRIM39-201ENST00000376656 LINC00575Q6W349 94 aa11.3□□□□□ -0.6
TRIM39-201ENST00000376656 LINC00269Q8N2A0 174 aa11.3□□□□□ -0.6
TRIM39-201ENST00000376656 NDUFC2-KCTD14E9PQ53 114 aa11.29□□□□□ -0.6
TRIM39-201ENST00000376656 RBM3P98179 157 aaKnown RBP11.29□□□□□ -0.6
TRIM39-201ENST00000376656 Q8N3U1 123 aa11.29□□□□□ -0.6
TRIM39-201ENST00000376656 IGLV1-51P01701 117 aa11.29□□□□□ -0.6
TRIM39-201ENST00000376656 COX17Q14061 63 aa11.29□□□□□ -0.6
TRIM39-201ENST00000376656 ESM1Q9NQ30 184 aa11.28□□□□□ -0.6
TRIM39-201ENST00000376656 SPATA3Q8NHX4 192 aa11.27□□□□□ -0.6
TRIM39-201ENST00000376656 CHCHD10Q8WYQ3 142 aaPredicted RBP11.27□□□□□ -0.61
TRIM39-201ENST00000376656 BBC3Q96PG8 261 aaPredicted RBP11.27□□□□□ -0.61
TRIM39-201ENST00000376656 LAMTOR3Q9UHA4 124 aa11.27□□□□□ -0.61
TRIM39-201ENST00000376656 CD164L2Q6UWJ8 174 aa11.27□□□□□ -0.61
TRIM39-201ENST00000376656 ZFYVE26Q68DK2 2539 aa11.26□□□□□ -0.61
TRIM39-201ENST00000376656 ZNF561-AS1K7EIQ3 104 aa11.25□□□□□ -0.61
TRIM39-201ENST00000376656 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
TRIM39-201ENST00000376656 FAM236DA0A1B0GTK5 79 aa11.25□□□□□ -0.61
TRIM39-201ENST00000376656 FAM236CP0DP71 79 aa11.25□□□□□ -0.61
TRIM39-201ENST00000376656 LINC01547P58512 204 aaPredicted RBP11.25□□□□□ -0.61
TRIM39-201ENST00000376656 DEFB113Q30KQ7 82 aa11.25□□□□□ -0.61
TRIM39-201ENST00000376656 HAMPP81172 84 aa11.25□□□□□ -0.61
TRIM39-201ENST00000376656 NBEAL2Q6ZNJ1 2754 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 PIEZO1Q92508 2521 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 LOC110117498A0A087WWA1 95 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 C6orf223Q8N319 242 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 WIPF1O43516 503 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 Q6ZVQ6 151 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 LINC00612Q8N6U2 182 aa11.24□□□□□ -0.61
TRIM39-201ENST00000376656 GCN1Q92616 2671 aaKnown RBP11.23□□□□□ -0.61
TRIM39-201ENST00000376656 H7BZZ5 65 aa11.23□□□□□ -0.61
TRIM39-201ENST00000376656 C10orf25Q5T742 122 aa11.23□□□□□ -0.61
TRIM39-201ENST00000376656 TRAV7A0A075B6U4 112 aa11.23□□□□□ -0.61
TRIM39-201ENST00000376656 ANGP03950 147 aaKnown RBP11.23□□□□□ -0.61
TRIM39-201ENST00000376656 LINC01006Q8NI28 216 aa11.23□□□□□ -0.61
TRIM39-201ENST00000376656 APCP25054 2843 aa11.23□□□□□ -0.61
TRIM39-201ENST00000376656 ZNF843Q8N446 348 aa11.22□□□□□ -0.61
TRIM39-201ENST00000376656 PRO0255Q9UI72 69 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms