RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 S100A12P80511 92 aa8.33□□□□□ -1.08
CLCN6-205ENST00000376492 FOXI1Q12951 378 aa8.33□□□□□ -1.08
CLCN6-205ENST00000376492 CFAP161Q6P656 301 aa8.33□□□□□ -1.08
CLCN6-205ENST00000376492 LINC00518Q8N0U6 118 aa8.33□□□□□ -1.08
CLCN6-205ENST00000376492 CHTF8P0CG12 524 aa8.32□□□□□ -1.08
CLCN6-205ENST00000376492 UBE2D1P51668 147 aa8.32□□□□□ -1.08
CLCN6-205ENST00000376492 CNBPP62633 177 aaKnown RBP8.32□□□□□ -1.08
CLCN6-205ENST00000376492 HERVK_113P63121 156 aa8.32□□□□□ -1.08
CLCN6-205ENST00000376492 SS18Q15532 418 aa8.32□□□□□ -1.08
CLCN6-205ENST00000376492 Q6ZUT4 128 aa8.32□□□□□ -1.08
CLCN6-205ENST00000376492 MRPL35Q9NZE8 188 aaKnown RBP8.32□□□□□ -1.08
CLCN6-205ENST00000376492 IGLV5-45A0A087WSX0 123 aa8.31□□□□□ -1.08
CLCN6-205ENST00000376492 hDV102S1A0JD36 115 aa8.31□□□□□ -1.08
CLCN6-205ENST00000376492 HSBP1L1C9JCN9 74 aa8.31□□□□□ -1.08
CLCN6-205ENST00000376492 XCL1P47992 114 aa8.31□□□□□ -1.08
CLCN6-205ENST00000376492 CIRBPQ14011 172 aaKnown RBP8.31□□□□□ -1.08
CLCN6-205ENST00000376492 CD164L2Q6UWJ8 174 aa8.31□□□□□ -1.08
CLCN6-205ENST00000376492 LINC01561Q8N1V8 128 aa8.31□□□□□ -1.08
CLCN6-205ENST00000376492 C15orf56Q8N910 161 aa8.31□□□□□ -1.08
CLCN6-205ENST00000376492 IGLV4-69A0A075B6H9 119 aa8.3□□□□□ -1.08
CLCN6-205ENST00000376492 C11orf86A6NJI1 115 aa8.3□□□□□ -1.08
CLCN6-205ENST00000376492 SLPIP03973 132 aa8.3□□□□□ -1.08
CLCN6-205ENST00000376492 A0A087WYN8 130 aa8.29□□□□□ -1.08
CLCN6-205ENST00000376492 C12orf57Q99622 126 aa8.29□□□□□ -1.08
CLCN6-205ENST00000376492 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
CLCN6-205ENST00000376492 GVQW2A0A096LPI5 108 aaPredicted RBP8.28□□□□□ -1.08
CLCN6-205ENST00000376492 H0Y8G0 127 aa8.28□□□□□ -1.08
CLCN6-205ENST00000376492 H3BRM9 83 aa8.28□□□□□ -1.08
CLCN6-205ENST00000376492 RNASE13Q5GAN3 156 aaKnown RBP8.28□□□□□ -1.08
CLCN6-205ENST00000376492 LINC00242Q5T6M2 205 aa8.28□□□□□ -1.08
CLCN6-205ENST00000376492 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
CLCN6-205ENST00000376492 DPH3Q96FX2 82 aa8.28□□□□□ -1.08
CLCN6-205ENST00000376492 VAMP8Q9BV40 100 aa8.28□□□□□ -1.08
CLCN6-205ENST00000376492 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.27□□□□□ -1.09
CLCN6-205ENST00000376492 TRAV13-1A0A0B4J241 112 aa8.27□□□□□ -1.09
CLCN6-205ENST00000376492 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.09
CLCN6-205ENST00000376492 HERVK_113P61574 105 aa8.27□□□□□ -1.09
CLCN6-205ENST00000376492 GEMIN7Q9H840 131 aaKnown RBP8.27□□□□□ -1.09
CLCN6-205ENST00000376492 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
CLCN6-205ENST00000376492 HIGD2BQ4VC39 106 aa8.26□□□□□ -1.09
CLCN6-205ENST00000376492 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
CLCN6-205ENST00000376492 LINC01600Q96MT4 127 aa8.26□□□□□ -1.09
CLCN6-205ENST00000376492 IGHV3OR16-9A0A0B4J2B5 98 aa8.25□□□□□ -1.09
CLCN6-205ENST00000376492 A0A0J9YXV3 536 aa8.25□□□□□ -1.09
CLCN6-205ENST00000376492 E9PLD3 99 aa8.25□□□□□ -1.09
CLCN6-205ENST00000376492 A0A087WZ39 114 aa8.24□□□□□ -1.09
CLCN6-205ENST00000376492 TMEM223A0PJW6 202 aa8.24□□□□□ -1.09
CLCN6-205ENST00000376492 COX7A2LO14548 114 aa8.24□□□□□ -1.09
CLCN6-205ENST00000376492 DLEU1O43261 78 aa8.24□□□□□ -1.09
CLCN6-205ENST00000376492 ZNF22P17026 224 aaPredicted RBP8.24□□□□□ -1.09
CLCN6-205ENST00000376492 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
CLCN6-205ENST00000376492 PMCHL2Q9BQD1 86 aa8.24□□□□□ -1.09
CLCN6-205ENST00000376492 PLAC8Q9NZF1 115 aa8.24□□□□□ -1.09
CLCN6-205ENST00000376492 TMEM170BQ5T4T1 132 aa8.23□□□□□ -1.09
CLCN6-205ENST00000376492 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
CLCN6-205ENST00000376492 MALP21145 153 aa8.22□□□□□ -1.09
CLCN6-205ENST00000376492 PRR3P79522 188 aaKnown RBP8.22□□□□□ -1.09
CLCN6-205ENST00000376492 SPATA45Q537H7 98 aa8.22□□□□□ -1.09
CLCN6-205ENST00000376492 C5orf38Q86SI9 138 aa8.22□□□□□ -1.09
CLCN6-205ENST00000376492 LINC00469Q8N7U9 141 aa8.22□□□□□ -1.09
CLCN6-205ENST00000376492 PLEKHB2Q96CS7 222 aa8.22□□□□□ -1.09
CLCN6-205ENST00000376492 IGLV5-39A0A0G2JS06 123 aa8.21□□□□□ -1.1
CLCN6-205ENST00000376492 TSTD3H0UI37 97 aa8.21□□□□□ -1.1
CLCN6-205ENST00000376492 ZNF561-AS1K7EIQ3 104 aa8.21□□□□□ -1.1
CLCN6-205ENST00000376492 NMUP48645 174 aa8.21□□□□□ -1.1
CLCN6-205ENST00000376492 ATOH7Q8N100 152 aa8.21□□□□□ -1.1
CLCN6-205ENST00000376492 CDKN2A-AS1Q9UH64 79 aa8.21□□□□□ -1.1
CLCN6-205ENST00000376492 LEPROTO15243 131 aa8.2□□□□□ -1.1
CLCN6-205ENST00000376492 APOMO95445 188 aa8.2□□□□□ -1.1
CLCN6-205ENST00000376492 COX8AP10176 69 aa8.2□□□□□ -1.1
CLCN6-205ENST00000376492 COX6A2Q02221 97 aa8.2□□□□□ -1.1
CLCN6-205ENST00000376492 STPG4Q8N801 248 aa8.2□□□□□ -1.1
CLCN6-205ENST00000376492 LINC00526Q96FQ7 95 aa8.2□□□□□ -1.1
CLCN6-205ENST00000376492 PAM16Q9Y3D7 125 aa8.2□□□□□ -1.1
CLCN6-205ENST00000376492 LPAP08519 4548 aa8.19□□□□□ -1.1
CLCN6-205ENST00000376492 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
CLCN6-205ENST00000376492 F8WDY8 70 aa8.19□□□□□ -1.1
CLCN6-205ENST00000376492 KRTAP10-8P60410 259 aa8.19□□□□□ -1.1
CLCN6-205ENST00000376492 SYCNQ0VAF6 134 aa8.19□□□□□ -1.1
CLCN6-205ENST00000376492 MAJINQ3KP22 176 aa8.19□□□□□ -1.1
CLCN6-205ENST00000376492 SMIM1B2RUZ4 78 aa8.18□□□□□ -1.1
CLCN6-205ENST00000376492 ANKRD39Q53RE8 183 aa8.18□□□□□ -1.1
CLCN6-205ENST00000376492 BOD1L2Q8IYS8 172 aa8.18□□□□□ -1.1
CLCN6-205ENST00000376492 C2orf48Q96LS8 159 aa8.18□□□□□ -1.1
CLCN6-205ENST00000376492 CARD19Q96LW7 228 aa8.18□□□□□ -1.1
CLCN6-205ENST00000376492 UQCR10Q9UDW1 63 aa8.18□□□□□ -1.1
CLCN6-205ENST00000376492 J3QQQ9 107 aa8.17□□□□□ -1.1
CLCN6-205ENST00000376492 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
CLCN6-205ENST00000376492 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
CLCN6-205ENST00000376492 LINC00587B1AMM8 73 aa8.16□□□□□ -1.1
CLCN6-205ENST00000376492 CXCL5P42830 114 aa8.16□□□□□ -1.1
CLCN6-205ENST00000376492 Q8IZM0 81 aa8.16□□□□□ -1.1
CLCN6-205ENST00000376492 PKIGQ9Y2B9 76 aa8.16□□□□□ -1.1
CLCN6-205ENST00000376492 LGALS3P17931 250 aaKnown RBP8.15□□□□□ -1.1
CLCN6-205ENST00000376492 HERV-K104P63124 156 aa8.15□□□□□ -1.1
CLCN6-205ENST00000376492 SPAG11BQ08648 103 aa8.15□□□□□ -1.1
CLCN6-205ENST00000376492 ORAOV1Q8WV07 137 aa8.15□□□□□ -1.1
CLCN6-205ENST00000376492 CAMK2N2Q96S95 79 aa8.15□□□□□ -1.1
CLCN6-205ENST00000376492 HIGD1BQ9P298 99 aa8.15□□□□□ -1.1
CLCN6-205ENST00000376492 A0A096LNI7 61 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms