RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 BEAN1Q3B7T3 259 aa10.18□□□□□ -0.78
TNFRSF1B-201ENST00000376259 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
TNFRSF1B-201ENST00000376259 RPL18AQ02543 176 aaKnown RBP10.17□□□□□ -0.78
TNFRSF1B-201ENST00000376259 LINC00643Q86TS7 51 aa10.17□□□□□ -0.78
TNFRSF1B-201ENST00000376259 FAM104AQ969W3 186 aa10.17□□□□□ -0.78
TNFRSF1B-201ENST00000376259 TRAV25A0A0B4J276 109 aa10.17□□□□□ -0.78
TNFRSF1B-201ENST00000376259 TIMM17BO60830 172 aa10.17□□□□□ -0.78
TNFRSF1B-201ENST00000376259 LINC00959A0A1B0GUT2 108 aa10.16□□□□□ -0.78
TNFRSF1B-201ENST00000376259 CMC4P56277 68 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF1B-201ENST00000376259 CITED1Q99966 193 aa10.16□□□□□ -0.78
TNFRSF1B-201ENST00000376259 APCP25054 2843 aa10.16□□□□□ -0.78
TNFRSF1B-201ENST00000376259 TRAV23DV6A0A075B6W5 121 aa10.15□□□□□ -0.78
TNFRSF1B-201ENST00000376259 hADV29S1A0JD25 119 aa10.15□□□□□ -0.78
TNFRSF1B-201ENST00000376259 C6orf99Q4VX62 202 aa10.14□□□□□ -0.79
TNFRSF1B-201ENST00000376259 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
TNFRSF1B-201ENST00000376259 TRACP01848 142 aa10.14□□□□□ -0.79
TNFRSF1B-201ENST00000376259 ACYP1P07311 99 aa10.14□□□□□ -0.79
TNFRSF1B-201ENST00000376259 NHLRC4P0CG21 123 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF1B-201ENST00000376259 HIGD2BQ4VC39 106 aa10.14□□□□□ -0.79
TNFRSF1B-201ENST00000376259 H0YGX0 51 aa10.13□□□□□ -0.79
TNFRSF1B-201ENST00000376259 CHCHD10Q8WYQ3 142 aaPredicted RBP10.13□□□□□ -0.79
TNFRSF1B-201ENST00000376259 PRO0255Q9UI72 69 aa10.13□□□□□ -0.79
TNFRSF1B-201ENST00000376259 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
TNFRSF1B-201ENST00000376259 CXCL5P42830 114 aa10.13□□□□□ -0.79
TNFRSF1B-201ENST00000376259 NBPF19A0A087WUL8 3843 aa10.13□□□□□ -0.79
TNFRSF1B-201ENST00000376259 FHL2Q14192 279 aa10.12□□□□□ -0.79
TNFRSF1B-201ENST00000376259 SCXQ7RTU7 201 aa10.12□□□□□ -0.79
TNFRSF1B-201ENST00000376259 OVOL2Q9BRP0 275 aa10.12□□□□□ -0.79
TNFRSF1B-201ENST00000376259 SPAG11BQ08648 103 aa10.12□□□□□ -0.79
TNFRSF1B-201ENST00000376259 TMEM126AQ9H061 195 aa10.12□□□□□ -0.79
TNFRSF1B-201ENST00000376259 REG3AQ06141 175 aa10.11□□□□□ -0.79
TNFRSF1B-201ENST00000376259 DEFB105AQ8NG35 78 aa10.11□□□□□ -0.79
TNFRSF1B-201ENST00000376259 IBA57-AS1B1ANH7 110 aa10.1□□□□□ -0.79
TNFRSF1B-201ENST00000376259 ZNF561-AS1K7EIQ3 104 aa10.1□□□□□ -0.79
TNFRSF1B-201ENST00000376259 C6orf223Q8N319 242 aa10.1□□□□□ -0.79
TNFRSF1B-201ENST00000376259 UBL5Q9BZL1 73 aa10.1□□□□□ -0.79
TNFRSF1B-201ENST00000376259 FAM110AQ9BQ89 295 aa10.1□□□□□ -0.79
TNFRSF1B-201ENST00000376259 HIVEP1P15822 2718 aa10.09□□□□□ -0.79
TNFRSF1B-201ENST00000376259 SMCR5Q8TEV8 140 aa10.09□□□□□ -0.79
TNFRSF1B-201ENST00000376259 LRRC75A-AS1Q8N1F1 130 aa10.09□□□□□ -0.79
TNFRSF1B-201ENST00000376259 C9orf129Q5T035 196 aaKnown RBP10.08□□□□□ -0.8
TNFRSF1B-201ENST00000376259 ENHOQ6UWT2 76 aa10.08□□□□□ -0.8
TNFRSF1B-201ENST00000376259 UNQ6190/PRO20217Q6UXQ8 127 aa10.08□□□□□ -0.8
TNFRSF1B-201ENST00000376259 LINC00846Q9NV44 126 aa10.08□□□□□ -0.8
TNFRSF1B-201ENST00000376259 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
TNFRSF1B-201ENST00000376259 A0A096LNT2 108 aa10.07□□□□□ -0.8
TNFRSF1B-201ENST00000376259 IGHV3OR16-9A0A0B4J2B5 98 aa10.07□□□□□ -0.8
TNFRSF1B-201ENST00000376259 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
TNFRSF1B-201ENST00000376259 IGLV5-45A0A087WSX0 123 aa10.06□□□□□ -0.8
TNFRSF1B-201ENST00000376259 CR1P17927 2039 aa10.06□□□□□ -0.8
TNFRSF1B-201ENST00000376259 IGLV1-51P01701 117 aa10.06□□□□□ -0.8
TNFRSF1B-201ENST00000376259 RPL28P46779 137 aaKnown RBP10.06□□□□□ -0.8
TNFRSF1B-201ENST00000376259 A0A087WZ39 114 aa10.05□□□□□ -0.8
TNFRSF1B-201ENST00000376259 SHISA2Q6UWI4 295 aa10.05□□□□□ -0.8
TNFRSF1B-201ENST00000376259 INAFM1C9JVW0 142 aa10.05□□□□□ -0.8
TNFRSF1B-201ENST00000376259 ZNF469Q96JG9 3925 aaPredicted RBP10.05□□□□□ -0.8
TNFRSF1B-201ENST00000376259 IGHV4-28A0A0C4DH34 117 aa10.05□□□□□ -0.8
TNFRSF1B-201ENST00000376259 LOC107984640A0A0U1RRK4 108 aa10.05□□□□□ -0.8
TNFRSF1B-201ENST00000376259 HILS1P60008 231 aa10.05□□□□□ -0.8
TNFRSF1B-201ENST00000376259 CSDC2Q9Y534 153 aaKnown RBP10.04□□□□□ -0.8
TNFRSF1B-201ENST00000376259 DSCR8Q96T75 97 aa10.04□□□□□ -0.8
TNFRSF1B-201ENST00000376259 IGKV2D-24A0A075B6R9 120 aa10.04□□□□□ -0.8
TNFRSF1B-201ENST00000376259 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
TNFRSF1B-201ENST00000376259 STAB1Q9NY15 2570 aa10.03□□□□□ -0.8
TNFRSF1B-201ENST00000376259 FAM240AA0A1B0GVK7 77 aa10.03□□□□□ -0.8
TNFRSF1B-201ENST00000376259 GHRHP01286 108 aa10.03□□□□□ -0.8
TNFRSF1B-201ENST00000376259 GIG44P09565 113 aaPredicted RBP10.03□□□□□ -0.8
TNFRSF1B-201ENST00000376259 C20orf197Q8N268 126 aa10.03□□□□□ -0.8
TNFRSF1B-201ENST00000376259 C3orf22Q8N5N4 141 aa10.03□□□□□ -0.8
TNFRSF1B-201ENST00000376259 ATOX1O00244 68 aa10.02□□□□□ -0.8
TNFRSF1B-201ENST00000376259 Q6ZQY7 126 aa10.02□□□□□ -0.8
TNFRSF1B-201ENST00000376259 Q6Q795 121 aa10.02□□□□□ -0.81
TNFRSF1B-201ENST00000376259 USP17L23D6RBM5 183 aa10.01□□□□□ -0.81
TNFRSF1B-201ENST00000376259 UQCRQO14949 82 aa10.01□□□□□ -0.81
TNFRSF1B-201ENST00000376259 FAM19A1Q7Z5A9 133 aa10.01□□□□□ -0.81
TNFRSF1B-201ENST00000376259 TENM4Q6N022 2769 aa10.01□□□□□ -0.81
TNFRSF1B-201ENST00000376259 FSHBP01225 129 aa10.01□□□□□ -0.81
TNFRSF1B-201ENST00000376259 APOC4P55056 127 aa10.01□□□□□ -0.81
TNFRSF1B-201ENST00000376259 RBM3P98179 157 aaKnown RBP10.01□□□□□ -0.81
TNFRSF1B-201ENST00000376259 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
TNFRSF1B-201ENST00000376259 J3QKU1 62 aa10□□□□□ -0.81
TNFRSF1B-201ENST00000376259 CYSRT1A8MQ03 144 aa9.99□□□□□ -0.81
TNFRSF1B-201ENST00000376259 COL6A5A8TX70 2615 aa9.99□□□□□ -0.81
TNFRSF1B-201ENST00000376259 TMEM256-PLSCR3K7ERE1 68 aa9.98□□□□□ -0.81
TNFRSF1B-201ENST00000376259 M0QXV9 152 aa9.98□□□□□ -0.81
TNFRSF1B-201ENST00000376259 MRAPQ8TCY5 172 aa9.98□□□□□ -0.81
TNFRSF1B-201ENST00000376259 C10orf25Q5T742 122 aa9.98□□□□□ -0.81
TNFRSF1B-201ENST00000376259 RETNQ9HD89 108 aa9.98□□□□□ -0.81
TNFRSF1B-201ENST00000376259 CD164L2Q6UWJ8 174 aa9.98□□□□□ -0.81
TNFRSF1B-201ENST00000376259 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
TNFRSF1B-201ENST00000376259 UPK3BQ9BT76 320 aa9.97□□□□□ -0.81
TNFRSF1B-201ENST00000376259 PPDPFQ9H3Y8 114 aa9.97□□□□□ -0.81
TNFRSF1B-201ENST00000376259 PRB2P02812 416 aaPredicted RBP9.96□□□□□ -0.81
TNFRSF1B-201ENST00000376259 CELA1Q9UNI1 258 aa9.96□□□□□ -0.81
TNFRSF1B-201ENST00000376259 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
TNFRSF1B-201ENST00000376259 JMJD7-PLA2G4BH0Y9G9 81 aa9.96□□□□□ -0.82
TNFRSF1B-201ENST00000376259 C9orf66Q5T8R8 295 aa9.96□□□□□ -0.82
TNFRSF1B-201ENST00000376259 OXLD1Q5BKU9 147 aa9.95□□□□□ -0.82
TNFRSF1B-201ENST00000376259 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
TNFRSF1B-201ENST00000376259 COX7CP15954 63 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms