RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CYP4F30PQ9H0H9 118 aa7.3□□□□□ -1.24
PTCH1-204ENST00000375290 A8MZ25 164 aa7.3□□□□□ -1.24
PTCH1-204ENST00000375290 REG3GQ6UW15 175 aa7.3□□□□□ -1.24
PTCH1-204ENST00000375290 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
PTCH1-204ENST00000375290 KLKP1Q107X0 134 aa7.29□□□□□ -1.24
PTCH1-204ENST00000375290 LINC00337Q8N6G1 96 aa7.29□□□□□ -1.24
PTCH1-204ENST00000375290 BDP1A6H8Y1 2624 aa7.28□□□□□ -1.24
PTCH1-204ENST00000375290 A0A087WVE0 104 aa7.28□□□□□ -1.24
PTCH1-204ENST00000375290 IGLV1-51P01701 117 aa7.28□□□□□ -1.24
PTCH1-204ENST00000375290 TLN1Q9Y490 2541 aaKnown RBP7.28□□□□□ -1.24
PTCH1-204ENST00000375290 C22orf34Q6ZV56 151 aa7.27□□□□□ -1.25
PTCH1-204ENST00000375290 KPRPQ5T749 579 aaPredicted RBP7.27□□□□□ -1.25
PTCH1-204ENST00000375290 H3BNG1 76 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 BBC3Q96PG8 261 aaPredicted RBP7.26□□□□□ -1.25
PTCH1-204ENST00000375290 IGKV2-28A0A075B6P5 120 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 IGKV2D-28P01615 120 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 C11orf72Q8NBR9 251 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 PROK1P58294 105 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 LINC01600Q96MT4 127 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 IGHV3OR16-9A0A0B4J2B5 98 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 WFDC13Q8IUB5 93 aa7.26□□□□□ -1.25
PTCH1-204ENST00000375290 WDR87Q6ZQQ6 2873 aa7.25□□□□□ -1.25
PTCH1-204ENST00000375290 H0Y9P7 68 aa7.24□□□□□ -1.25
PTCH1-204ENST00000375290 COX6A2Q02221 97 aa7.24□□□□□ -1.25
PTCH1-204ENST00000375290 ODF3L2Q3SX64 289 aa7.24□□□□□ -1.25
PTCH1-204ENST00000375290 LINC00315P59091 139 aa7.24□□□□□ -1.25
PTCH1-204ENST00000375290 FHL2Q14192 279 aa7.24□□□□□ -1.25
PTCH1-204ENST00000375290 DOPEY1Q5JWR5 2465 aa7.24□□□□□ -1.25
PTCH1-204ENST00000375290 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.24□□□□□ -1.25
PTCH1-204ENST00000375290 C16orf95Q9H693 158 aa7.24□□□□□ -1.25
PTCH1-204ENST00000375290 LINC00482Q8N8I6 264 aa7.23□□□□□ -1.25
PTCH1-204ENST00000375290 ELOF1P60002 83 aaKnown RBP7.23□□□□□ -1.25
PTCH1-204ENST00000375290 IGKV2-24A0A0C4DH68 120 aa7.22□□□□□ -1.25
PTCH1-204ENST00000375290 Q6ZQT0 140 aa7.22□□□□□ -1.25
PTCH1-204ENST00000375290 C6orf223Q8N319 242 aa7.22□□□□□ -1.25
PTCH1-204ENST00000375290 SONP18583 2426 aaKnown RBP7.22□□□□□ -1.25
PTCH1-204ENST00000375290 GVQW2A0A096LPI5 108 aaPredicted RBP7.22□□□□□ -1.25
PTCH1-204ENST00000375290 PLA2G5P39877 138 aa7.22□□□□□ -1.25
PTCH1-204ENST00000375290 PCSK5Q92824 1860 aa7.21□□□□□ -1.25
PTCH1-204ENST00000375290 LY6G6DO95868 133 aa7.21□□□□□ -1.26
PTCH1-204ENST00000375290 UNQ6190/PRO20217Q6UXQ8 127 aa7.21□□□□□ -1.26
PTCH1-204ENST00000375290 ABCA2Q9BZC7 2435 aa7.2□□□□□ -1.26
PTCH1-204ENST00000375290 WIPF1O43516 503 aa7.2□□□□□ -1.26
PTCH1-204ENST00000375290 ZNF843Q8N446 348 aa7.2□□□□□ -1.26
PTCH1-204ENST00000375290 SOSTDC1Q6X4U4 206 aa7.19□□□□□ -1.26
PTCH1-204ENST00000375290 LINC01006Q8NI28 216 aa7.19□□□□□ -1.26
PTCH1-204ENST00000375290 A0A0J9YWU9 116 aa7.19□□□□□ -1.26
PTCH1-204ENST00000375290 IGHV4-30-4P0DP06 118 aa7.19□□□□□ -1.26
PTCH1-204ENST00000375290 ACYP2P14621 99 aa7.19□□□□□ -1.26
PTCH1-204ENST00000375290 SPATA3Q8NHX4 192 aa7.18□□□□□ -1.26
PTCH1-204ENST00000375290 TRBV7-4A0A0J9YYF1 115 aa7.17□□□□□ -1.26
PTCH1-204ENST00000375290 RETNQ9HD89 108 aa7.17□□□□□ -1.26
PTCH1-204ENST00000375290 PSPHP1O15172 72 aa7.17□□□□□ -1.26
PTCH1-204ENST00000375290 MOBPQ13875 183 aa7.17□□□□□ -1.26
PTCH1-204ENST00000375290 COL27A1Q8IZC6 1860 aaPredicted RBP7.17□□□□□ -1.26
PTCH1-204ENST00000375290 IGLV4-60A0A075B6I1 120 aa7.16□□□□□ -1.26
PTCH1-204ENST00000375290 DEFB4AO15263 64 aa7.16□□□□□ -1.26
PTCH1-204ENST00000375290 Q8NBF4 154 aa7.16□□□□□ -1.26
PTCH1-204ENST00000375290 C1orf64Q8NEQ6 169 aa7.16□□□□□ -1.26
PTCH1-204ENST00000375290 LITAFQ99732 161 aa7.16□□□□□ -1.26
PTCH1-204ENST00000375290 C8orf87E5RJ46 101 aa7.15□□□□□ -1.26
PTCH1-204ENST00000375290 Q9BRP9 147 aa7.15□□□□□ -1.26
PTCH1-204ENST00000375290 PIEZO1Q92508 2521 aa7.15□□□□□ -1.26
PTCH1-204ENST00000375290 Q6ZTC4 211 aa7.15□□□□□ -1.26
PTCH1-204ENST00000375290 TRAV22A0A0B4J277 110 aa7.15□□□□□ -1.26
PTCH1-204ENST00000375290 CD164Q04900 197 aa7.15□□□□□ -1.26
PTCH1-204ENST00000375290 NUPR2A6NF83 97 aa7.14□□□□□ -1.27
PTCH1-204ENST00000375290 LOC100131303A0A0U1RQF7 123 aa7.14□□□□□ -1.27
PTCH1-204ENST00000375290 PIEZO2Q9H5I5 2752 aa7.14□□□□□ -1.27
PTCH1-204ENST00000375290 PRO3102Q9H379 93 aa7.13□□□□□ -1.27
PTCH1-204ENST00000375290 LOC101927531A0A1B0GV80 90 aa7.13□□□□□ -1.27
PTCH1-204ENST00000375290 ATP11AUNQ6ZP68 121 aa7.13□□□□□ -1.27
PTCH1-204ENST00000375290 A0A087WSZ3 146 aa7.12□□□□□ -1.27
PTCH1-204ENST00000375290 IGLV6-57P01721 117 aa7.12□□□□□ -1.27
PTCH1-204ENST00000375290 RPL37AP61513 92 aaKnown RBP7.12□□□□□ -1.27
PTCH1-204ENST00000375290 PRM2P04554 102 aa7.12□□□□□ -1.27
PTCH1-204ENST00000375290 LINC01556Q5JQF7 62 aa7.12□□□□□ -1.27
PTCH1-204ENST00000375290 Q6ZRX8 168 aa7.11□□□□□ -1.27
PTCH1-204ENST00000375290 CCDC168Q8NDH2 2452 aa7.11□□□□□ -1.27
PTCH1-204ENST00000375290 NOTCH2Q04721 2471 aa7.11□□□□□ -1.27
PTCH1-204ENST00000375290 A0A1B0GU69 56 aa7.11□□□□□ -1.27
PTCH1-204ENST00000375290 RETNLBQ9BQ08 111 aa7.11□□□□□ -1.27
PTCH1-204ENST00000375290 C4orf26Q17RF5 130 aa7.1□□□□□ -1.27
PTCH1-204ENST00000375290 SMIM29Q86T20 159 aa7.1□□□□□ -1.27
PTCH1-204ENST00000375290 PRR4Q16378 134 aa7.1□□□□□ -1.27
PTCH1-204ENST00000375290 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
PTCH1-204ENST00000375290 LYPD5Q6UWN5 251 aa7.09□□□□□ -1.27
PTCH1-204ENST00000375290 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.09□□□□□ -1.27
PTCH1-204ENST00000375290 A8MTW9 85 aa7.08□□□□□ -1.28
PTCH1-204ENST00000375290 C19orf84I3L1E1 186 aa7.08□□□□□ -1.28
PTCH1-204ENST00000375290 SPAG11AQ6PDA7 123 aa7.08□□□□□ -1.28
PTCH1-204ENST00000375290 HIVEP3Q5T1R4 2406 aa7.08□□□□□ -1.28
PTCH1-204ENST00000375290 FHL3Q13643 280 aa7.07□□□□□ -1.28
PTCH1-204ENST00000375290 FAM218AQ96MZ4 157 aa7.07□□□□□ -1.28
PTCH1-204ENST00000375290 C10orf99Q6UWK7 81 aa7.07□□□□□ -1.28
PTCH1-204ENST00000375290 ZNF462Q96JM2 2506 aa7.07□□□□□ -1.28
PTCH1-204ENST00000375290 C9orf116Q5BN46 136 aaPredicted RBP7.07□□□□□ -1.28
PTCH1-204ENST00000375290 Q6ZSN1 163 aa7.07□□□□□ -1.28
PTCH1-204ENST00000375290 IGHV6-1A0A0B4J1U7 121 aa7.06□□□□□ -1.28
PTCH1-204ENST00000375290 LINC00167Q96N53 147 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms