RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SETXQ7Z333 2677 aaKnown RBP12.51□□□□□ -0.41
PHF1-201ENST00000374512 HIVEP2P31629 2446 aa12.51□□□□□ -0.41
PHF1-201ENST00000374512 C5orf38Q86SI9 138 aa12.5□□□□□ -0.41
PHF1-201ENST00000374512 SS18Q15532 418 aa12.5□□□□□ -0.41
PHF1-201ENST00000374512 C6orf226Q5I0X4 101 aa12.5□□□□□ -0.41
PHF1-201ENST00000374512 OBSCN-AS1Q96MR7 158 aa12.49□□□□□ -0.41
PHF1-201ENST00000374512 FASNP49327 2511 aaKnown RBP12.49□□□□□ -0.41
PHF1-201ENST00000374512 C2CD3Q4AC94 2353 aa12.49□□□□□ -0.41
PHF1-201ENST00000374512 FAM236AA0A1B0GUQ0 79 aa12.49□□□□□ -0.41
PHF1-201ENST00000374512 FAM236BA0A1B0GV22 79 aa12.49□□□□□ -0.41
PHF1-201ENST00000374512 LY6G6DO95868 133 aa12.49□□□□□ -0.41
PHF1-201ENST00000374512 Q8IZM0 81 aa12.49□□□□□ -0.41
PHF1-201ENST00000374512 A0A087WYN8 130 aa12.48□□□□□ -0.41
PHF1-201ENST00000374512 PAX4O43316 350 aa12.48□□□□□ -0.41
PHF1-201ENST00000374512 PFN2P35080 140 aa12.48□□□□□ -0.41
PHF1-201ENST00000374512 GAGE2AQ6NT46 116 aa12.48□□□□□ -0.41
PHF1-201ENST00000374512 SMIM9A6NGZ8 99 aa12.46□□□□□ -0.42
PHF1-201ENST00000374512 GYPEP15421 78 aa12.46□□□□□ -0.42
PHF1-201ENST00000374512 DEFB130BP0DP73 79 aa12.45□□□□□ -0.42
PHF1-201ENST00000374512 DEFB130AP0DP74 79 aa12.45□□□□□ -0.42
PHF1-201ENST00000374512 KRTAP10-3P60369 221 aa12.45□□□□□ -0.42
PHF1-201ENST00000374512 SVIPQ8NHG7 77 aa12.45□□□□□ -0.42
PHF1-201ENST00000374512 A0A1B0GX51 115 aa12.44□□□□□ -0.42
PHF1-201ENST00000374512 LINC00482Q8N8I6 264 aa12.44□□□□□ -0.42
PHF1-201ENST00000374512 TMEM126AQ9H061 195 aa12.44□□□□□ -0.42
PHF1-201ENST00000374512 PRO0255Q9UI72 69 aa12.44□□□□□ -0.42
PHF1-201ENST00000374512 OR13C6PQ8NH95 151 aa12.43□□□□□ -0.42
PHF1-201ENST00000374512 LECT2O14960 151 aa12.43□□□□□ -0.42
PHF1-201ENST00000374512 KLK5Q9Y337 293 aaPredicted RBP12.43□□□□□ -0.42
PHF1-201ENST00000374512 XCL1P47992 114 aa12.42□□□□□ -0.42
PHF1-201ENST00000374512 COX17Q14061 63 aa12.42□□□□□ -0.42
PHF1-201ENST00000374512 NIPBLQ6KC79 2804 aaeCLIP12.42□□□□□ -0.42
PHF1-201ENST00000374512 NDUFC2O95298 119 aa12.41□□□□□ -0.42
PHF1-201ENST00000374512 ORMDL1Q9P0S3 153 aa12.41□□□□□ -0.42
PHF1-201ENST00000374512 LINC00167Q96N53 147 aa12.39□□□□□ -0.43
PHF1-201ENST00000374512 UQCRQO14949 82 aa12.39□□□□□ -0.43
PHF1-201ENST00000374512 C14orf132Q9NPU4 83 aa12.39□□□□□ -0.43
PHF1-201ENST00000374512 X6R8D5 127 aa12.39□□□□□ -0.43
PHF1-201ENST00000374512 LYRM9A8MSI8 78 aa12.38□□□□□ -0.43
PHF1-201ENST00000374512 CD164L2Q6UWJ8 174 aa12.38□□□□□ -0.43
PHF1-201ENST00000374512 C3orf22Q8N5N4 141 aa12.38□□□□□ -0.43
PHF1-201ENST00000374512 HECTD1Q9ULT8 2610 aa12.37□□□□□ -0.43
PHF1-201ENST00000374512 INAFM1C9JVW0 142 aa12.37□□□□□ -0.43
PHF1-201ENST00000374512 HIST1H4AP62805 103 aaKnown RBP12.37□□□□□ -0.43
PHF1-201ENST00000374512 Q6JHZ5 121 aa12.37□□□□□ -0.43
PHF1-201ENST00000374512 IGHV4-28A0A0C4DH34 117 aa12.37□□□□□ -0.43
PHF1-201ENST00000374512 C11orf68Q9H3H3 251 aaKnown RBP12.37□□□□□ -0.43
PHF1-201ENST00000374512 C9orf129Q5T035 196 aaKnown RBP12.36□□□□□ -0.43
PHF1-201ENST00000374512 CFAP161Q6P656 301 aa12.35□□□□□ -0.43
PHF1-201ENST00000374512 JMJD7-PLA2G4BH0Y9G9 81 aa12.35□□□□□ -0.43
PHF1-201ENST00000374512 ATOX1O00244 68 aa12.35□□□□□ -0.43
PHF1-201ENST00000374512 KIAA0087Q14695 138 aa12.35□□□□□ -0.43
PHF1-201ENST00000374512 LINC00526Q96FQ7 95 aa12.35□□□□□ -0.43
PHF1-201ENST00000374512 MUC7Q8TAX7 377 aa12.34□□□□□ -0.43
PHF1-201ENST00000374512 C9orf66Q5T8R8 295 aa12.33□□□□□ -0.44
PHF1-201ENST00000374512 TMEM256-PLSCR3K7ERE1 68 aa12.33□□□□□ -0.44
PHF1-201ENST00000374512 NCR3O14931 201 aa12.33□□□□□ -0.44
PHF1-201ENST00000374512 Q8N814 137 aa12.33□□□□□ -0.44
PHF1-201ENST00000374512 LINC00846Q9NV44 126 aa12.33□□□□□ -0.44
PHF1-201ENST00000374512 NANOS2P60321 138 aaKnown RBP12.32□□□□□ -0.44
PHF1-201ENST00000374512 C9orf153Q5TBE3 101 aa12.32□□□□□ -0.44
PHF1-201ENST00000374512 LINC00269Q8N2A0 174 aa12.32□□□□□ -0.44
PHF1-201ENST00000374512 CCKP06307 115 aa12.31□□□□□ -0.44
PHF1-201ENST00000374512 COX7CP15954 63 aa12.31□□□□□ -0.44
PHF1-201ENST00000374512 CHCHD10Q8WYQ3 142 aaPredicted RBP12.31□□□□□ -0.44
PHF1-201ENST00000374512 NOTCH2Q04721 2471 aa12.31□□□□□ -0.44
PHF1-201ENST00000374512 SLPIP03973 132 aa12.31□□□□□ -0.44
PHF1-201ENST00000374512 S100A7L2Q5SY68 101 aa12.31□□□□□ -0.44
PHF1-201ENST00000374512 CLPSL2Q6UWE3 100 aa12.31□□□□□ -0.44
PHF1-201ENST00000374512 FN1P02751 2386 aaKnown RBP12.3□□□□□ -0.44
PHF1-201ENST00000374512 REG3AQ06141 175 aa12.29□□□□□ -0.44
PHF1-201ENST00000374512 OTOGQ6ZRI0 2925 aa12.28□□□□□ -0.44
PHF1-201ENST00000374512 RPL18AQ02543 176 aaKnown RBP12.28□□□□□ -0.44
PHF1-201ENST00000374512 A0A096LPF7 62 aa12.27□□□□□ -0.44
PHF1-201ENST00000374512 ANGP03950 147 aaKnown RBP12.27□□□□□ -0.44
PHF1-201ENST00000374512 SPATA3Q8NHX4 192 aa12.27□□□□□ -0.44
PHF1-201ENST00000374512 SMIM20Q8N5G0 67 aa12.27□□□□□ -0.45
PHF1-201ENST00000374512 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
PHF1-201ENST00000374512 C2orf48Q96LS8 159 aa12.26□□□□□ -0.45
PHF1-201ENST00000374512 CRYGAP11844 174 aa12.26□□□□□ -0.45
PHF1-201ENST00000374512 APOC4P55056 127 aa12.26□□□□□ -0.45
PHF1-201ENST00000374512 ATP5EP2Q5VTU8 51 aa12.26□□□□□ -0.45
PHF1-201ENST00000374512 PRR3P79522 188 aaKnown RBP12.25□□□□□ -0.45
PHF1-201ENST00000374512 NSD1Q96L73 2696 aaPredicted RBP12.25□□□□□ -0.45
PHF1-201ENST00000374512 IGKV3D-7A0A0C4DH55 119 aa12.23□□□□□ -0.45
PHF1-201ENST00000374512 DAD1P61803 113 aa12.23□□□□□ -0.45
PHF1-201ENST00000374512 DEFB4AO15263 64 aa12.22□□□□□ -0.45
PHF1-201ENST00000374512 IGLV10-54A0A075B6I4 117 aa12.22□□□□□ -0.45
PHF1-201ENST00000374512 A0A0J9YWU9 116 aa12.21□□□□□ -0.45
PHF1-201ENST00000374512 IGHV4-30-4P0DP06 118 aa12.21□□□□□ -0.45
PHF1-201ENST00000374512 C6orf99Q4VX62 202 aa12.21□□□□□ -0.45
PHF1-201ENST00000374512 LELP1Q5T871 98 aa12.21□□□□□ -0.46
PHF1-201ENST00000374512 LINC00575Q6W349 94 aa12.21□□□□□ -0.46
PHF1-201ENST00000374512 H3BQ85 93 aa12.2□□□□□ -0.46
PHF1-201ENST00000374512 MIFP14174 115 aa12.2□□□□□ -0.46
PHF1-201ENST00000374512 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
PHF1-201ENST00000374512 C9orf116Q5BN46 136 aaPredicted RBP12.19□□□□□ -0.46
PHF1-201ENST00000374512 LYPD5Q6UWN5 251 aa12.19□□□□□ -0.46
PHF1-201ENST00000374512 SERP2Q8N6R1 65 aa12.19□□□□□ -0.46
PHF1-201ENST00000374512 SPAG11BQ08648 103 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms