RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 RAB5BP61020 215 aa12.48□□□□□ -0.41
TMEM53-205ENST00000372244 C6orf226Q5I0X4 101 aa12.48□□□□□ -0.41
TMEM53-205ENST00000372244 OXTP01178 125 aa12.47□□□□□ -0.41
TMEM53-205ENST00000372244 PDZD11Q5EBL8 140 aa12.47□□□□□ -0.41
TMEM53-205ENST00000372244 HBDP02042 147 aa12.46□□□□□ -0.41
TMEM53-205ENST00000372244 PRSS2P07478 247 aa12.46□□□□□ -0.41
TMEM53-205ENST00000372244 PRR3P79522 188 aaKnown RBP12.46□□□□□ -0.41
TMEM53-205ENST00000372244 LINC00469Q8N7U9 141 aa12.46□□□□□ -0.41
TMEM53-205ENST00000372244 J3QL48 77 aa12.46□□□□□ -0.42
TMEM53-205ENST00000372244 PMCHL1Q16048 86 aa12.46□□□□□ -0.42
TMEM53-205ENST00000372244 PACRGQ96M98 296 aaPredicted RBP12.46□□□□□ -0.42
TMEM53-205ENST00000372244 TOMM7Q9P0U1 55 aa12.46□□□□□ -0.42
TMEM53-205ENST00000372244 FAT3Q8TDW7 4589 aa12.45□□□□□ -0.42
TMEM53-205ENST00000372244 SMIM1B2RUZ4 78 aa12.45□□□□□ -0.42
TMEM53-205ENST00000372244 NDUFC2-KCTD14E9PQ53 114 aa12.45□□□□□ -0.42
TMEM53-205ENST00000372244 CKS1BP61024 79 aa12.45□□□□□ -0.42
TMEM53-205ENST00000372244 GAGE2EQ4V326 116 aa12.43□□□□□ -0.42
TMEM53-205ENST00000372244 GAGE2DQ9UEU5 116 aa12.43□□□□□ -0.42
TMEM53-205ENST00000372244 IGLC3P0DOY3 106 aa12.42□□□□□ -0.42
TMEM53-205ENST00000372244 CHCHD1Q96BP2 118 aaKnown RBP12.41□□□□□ -0.42
TMEM53-205ENST00000372244 FAM168BA1KXE4 195 aa12.4□□□□□ -0.42
TMEM53-205ENST00000372244 F8VRH5 84 aa12.4□□□□□ -0.42
TMEM53-205ENST00000372244 ATP5LO75964 103 aa12.4□□□□□ -0.42
TMEM53-205ENST00000372244 KRTAP7-1Q8IUC3 87 aa12.4□□□□□ -0.42
TMEM53-205ENST00000372244 CXCL5P42830 114 aa12.4□□□□□ -0.43
TMEM53-205ENST00000372244 COX7B2Q8TF08 81 aa12.4□□□□□ -0.43
TMEM53-205ENST00000372244 TRGC2P03986 189 aa12.39□□□□□ -0.43
TMEM53-205ENST00000372244 NDUFA6P56556 154 aa12.39□□□□□ -0.43
TMEM53-205ENST00000372244 C9orf129Q5T035 196 aaKnown RBP12.39□□□□□ -0.43
TMEM53-205ENST00000372244 PHF5AQ7RTV0 110 aaKnown RBP12.39□□□□□ -0.43
TMEM53-205ENST00000372244 SPINK8P0C7L1 97 aa12.38□□□□□ -0.43
TMEM53-205ENST00000372244 SRSF9Q13242 221 aaKnown RBP eCLIP12.38□□□□□ -0.43
TMEM53-205ENST00000372244 COLCA2A8K830 154 aa12.37□□□□□ -0.43
TMEM53-205ENST00000372244 H3BRM9 83 aa12.37□□□□□ -0.43
TMEM53-205ENST00000372244 BAGE3Q86Y29 109 aa12.37□□□□□ -0.43
TMEM53-205ENST00000372244 IGLV5-39A0A0G2JS06 123 aa12.36□□□□□ -0.43
TMEM53-205ENST00000372244 ZNF22P17026 224 aaPredicted RBP12.35□□□□□ -0.43
TMEM53-205ENST00000372244 PSORS1C2Q9UIG4 136 aa12.35□□□□□ -0.43
TMEM53-205ENST00000372244 SPINK6Q6UWN8 80 aa12.34□□□□□ -0.43
TMEM53-205ENST00000372244 FAM19A5Q7Z5A7 132 aaPredicted RBP12.34□□□□□ -0.43
TMEM53-205ENST00000372244 KRTAP11-1Q8IUC1 163 aa12.33□□□□□ -0.44
TMEM53-205ENST00000372244 IFI27L1Q96BM0 104 aa12.33□□□□□ -0.44
TMEM53-205ENST00000372244 C11orf86A6NJI1 115 aa12.32□□□□□ -0.44
TMEM53-205ENST00000372244 MT1HL1P0DM35 61 aa12.32□□□□□ -0.44
TMEM53-205ENST00000372244 TRAV12-1A0A0B4J245 112 aa12.31□□□□□ -0.44
TMEM53-205ENST00000372244 FAM19A2Q8N3H0 131 aa12.31□□□□□ -0.44
TMEM53-205ENST00000372244 HSBP1O75506 76 aa12.3□□□□□ -0.44
TMEM53-205ENST00000372244 LINC00310P59036 64 aa12.3□□□□□ -0.44
TMEM53-205ENST00000372244 ODF1Q14990 250 aa12.3□□□□□ -0.44
TMEM53-205ENST00000372244 XAGE1AQ9HD64 81 aa12.3□□□□□ -0.44
TMEM53-205ENST00000372244 CHTOPQ9Y3Y2 248 aaKnown RBP12.3□□□□□ -0.44
TMEM53-205ENST00000372244 M0QXV9 152 aa12.29□□□□□ -0.44
TMEM53-205ENST00000372244 SERTAD4-AS1Q5TG53 156 aa12.28□□□□□ -0.44
TMEM53-205ENST00000372244 C1orf137Q5JT78 98 aa12.27□□□□□ -0.44
TMEM53-205ENST00000372244 TMEM170BQ5T4T1 132 aa12.27□□□□□ -0.44
TMEM53-205ENST00000372244 SERF1AO75920 110 aa12.27□□□□□ -0.45
TMEM53-205ENST00000372244 LINC01600Q96MT4 127 aa12.27□□□□□ -0.45
TMEM53-205ENST00000372244 C22orf24Q9Y442 160 aa12.26□□□□□ -0.45
TMEM53-205ENST00000372244 NUPR1O60356 82 aa12.25□□□□□ -0.45
TMEM53-205ENST00000372244 TNXBP22105 4242 aa12.25□□□□□ -0.45
TMEM53-205ENST00000372244 IGLV7-43P04211 117 aa12.24□□□□□ -0.45
TMEM53-205ENST00000372244 TP73-AS1Q9UF72 201 aa12.23□□□□□ -0.45
TMEM53-205ENST00000372244 PLA2G2DQ9UNK4 145 aa12.23□□□□□ -0.45
TMEM53-205ENST00000372244 TMEM223A0PJW6 202 aa12.22□□□□□ -0.45
TMEM53-205ENST00000372244 SCO1O75880 301 aa12.22□□□□□ -0.45
TMEM53-205ENST00000372244 UBE2BP63146 152 aa12.22□□□□□ -0.45
TMEM53-205ENST00000372244 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
TMEM53-205ENST00000372244 LEPROTL1O95214 131 aa12.21□□□□□ -0.45
TMEM53-205ENST00000372244 LBHQ53QV2 105 aaPredicted RBP12.21□□□□□ -0.45
TMEM53-205ENST00000372244 ZNF625Q96I27 306 aaPredicted RBP12.21□□□□□ -0.45
TMEM53-205ENST00000372244 COX17Q14061 63 aa12.21□□□□□ -0.46
TMEM53-205ENST00000372244 SFTA2Q6UW10 78 aa12.21□□□□□ -0.46
TMEM53-205ENST00000372244 PFN2P35080 140 aa12.2□□□□□ -0.46
TMEM53-205ENST00000372244 KRTAP10-8P60410 259 aa12.19□□□□□ -0.46
TMEM53-205ENST00000372244 MRPL55Q7Z7F7 128 aaKnown RBP12.19□□□□□ -0.46
TMEM53-205ENST00000372244 ERG28Q9UKR5 140 aa12.19□□□□□ -0.46
TMEM53-205ENST00000372244 IGLV5-37A0A075B6J1 123 aa12.17□□□□□ -0.46
TMEM53-205ENST00000372244 HSPB8Q9UJY1 196 aa12.17□□□□□ -0.46
TMEM53-205ENST00000372244 DIRC1Q969H9 104 aa12.16□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 LINC00167Q96N53 147 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 SND1-IT1Q9HBX3 110 aa12.15□□□□□ -0.46
TMEM53-205ENST00000372244 FABP4P15090 132 aa12.14□□□□□ -0.47
TMEM53-205ENST00000372244 H0Y8G0 127 aa12.14□□□□□ -0.47
TMEM53-205ENST00000372244 HMCN2Q8NDA2 5059 aa12.12□□□□□ -0.47
TMEM53-205ENST00000372244 H0Y9J4 135 aa12.12□□□□□ -0.47
TMEM53-205ENST00000372244 PLNP26678 52 aa12.11□□□□□ -0.47
TMEM53-205ENST00000372244 RPL37AP8A6NKH3 93 aa12.1□□□□□ -0.47
TMEM53-205ENST00000372244 ZNF861PO60384 105 aa12.1□□□□□ -0.47
TMEM53-205ENST00000372244 VPREB1P12018 145 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms