RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 DNAL4O96015 105 aa13.31□□□□□ -0.28
TMEM53-202ENST00000372237 MALP21145 153 aa13.31□□□□□ -0.28
TMEM53-202ENST00000372237 XCL1P47992 114 aa13.31□□□□□ -0.28
TMEM53-202ENST00000372237 LINC00612Q8N6U2 182 aa13.31□□□□□ -0.28
TMEM53-202ENST00000372237 B5MCH6 92 aa13.3□□□□□ -0.28
TMEM53-202ENST00000372237 PAX4O43316 350 aa13.3□□□□□ -0.28
TMEM53-202ENST00000372237 INAFM2P0DMQ5 153 aa13.3□□□□□ -0.28
TMEM53-202ENST00000372237 SS18Q15532 418 aa13.3□□□□□ -0.28
TMEM53-202ENST00000372237 A0A087WYN8 130 aa13.29□□□□□ -0.28
TMEM53-202ENST00000372237 A0A1B0GUV1 79 aa13.29□□□□□ -0.28
TMEM53-202ENST00000372237 H0YGX0 51 aa13.29□□□□□ -0.28
TMEM53-202ENST00000372237 CCDC179H3BU77 68 aa13.29□□□□□ -0.28
TMEM53-202ENST00000372237 SMCR5Q8TEV8 140 aa13.29□□□□□ -0.28
TMEM53-202ENST00000372237 FN1P02751 2386 aaKnown RBP13.28□□□□□ -0.28
TMEM53-202ENST00000372237 NSD1Q96L73 2696 aaPredicted RBP13.28□□□□□ -0.28
TMEM53-202ENST00000372237 A0A096LPF7 62 aa13.28□□□□□ -0.28
TMEM53-202ENST00000372237 CLPSL2Q6UWE3 100 aa13.28□□□□□ -0.28
TMEM53-202ENST00000372237 OR13C6PQ8NH95 151 aa13.28□□□□□ -0.28
TMEM53-202ENST00000372237 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
TMEM53-202ENST00000372237 INAFM1C9JVW0 142 aa13.27□□□□□ -0.28
TMEM53-202ENST00000372237 X6R8D5 127 aa13.27□□□□□ -0.28
TMEM53-202ENST00000372237 HIVEP1P15822 2718 aa13.27□□□□□ -0.29
TMEM53-202ENST00000372237 KRTAP10-3P60369 221 aa13.26□□□□□ -0.29
TMEM53-202ENST00000372237 LINC00643Q86TS7 51 aa13.26□□□□□ -0.29
TMEM53-202ENST00000372237 GAGE2AQ6NT46 116 aa13.25□□□□□ -0.29
TMEM53-202ENST00000372237 Q8IZM0 81 aa13.25□□□□□ -0.29
TMEM53-202ENST00000372237 LINC00482Q8N8I6 264 aa13.25□□□□□ -0.29
TMEM53-202ENST00000372237 IMUPQ9GZP8 106 aa13.25□□□□□ -0.29
TMEM53-202ENST00000372237 SS18L2Q9UHA2 77 aa13.25□□□□□ -0.29
TMEM53-202ENST00000372237 ATP5G1P05496 136 aa13.25□□□□□ -0.29
TMEM53-202ENST00000372237 SMIM9A6NGZ8 99 aa13.24□□□□□ -0.29
TMEM53-202ENST00000372237 LECT2O14960 151 aa13.23□□□□□ -0.29
TMEM53-202ENST00000372237 SDIM1Q6ZPB5 146 aa13.23□□□□□ -0.29
TMEM53-202ENST00000372237 FAM236AA0A1B0GUQ0 79 aa13.21□□□□□ -0.29
TMEM53-202ENST00000372237 FAM236BA0A1B0GV22 79 aa13.21□□□□□ -0.29
TMEM53-202ENST00000372237 C9orf129Q5T035 196 aaKnown RBP13.19□□□□□ -0.3
TMEM53-202ENST00000372237 LINC01561Q8N1V8 128 aa13.19□□□□□ -0.3
TMEM53-202ENST00000372237 LINC00269Q8N2A0 174 aa13.19□□□□□ -0.3
TMEM53-202ENST00000372237 LYRM9A8MSI8 78 aa13.18□□□□□ -0.3
TMEM53-202ENST00000372237 C14orf132Q9NPU4 83 aa13.18□□□□□ -0.3
TMEM53-202ENST00000372237 DEFB4AO15263 64 aa13.17□□□□□ -0.3
TMEM53-202ENST00000372237 CD164L2Q6UWJ8 174 aa13.17□□□□□ -0.3
TMEM53-202ENST00000372237 FLNBO75369 2602 aaKnown RBP13.17□□□□□ -0.3
TMEM53-202ENST00000372237 DEFB135Q30KP9 77 aa13.16□□□□□ -0.3
TMEM53-202ENST00000372237 CFAP161Q6P656 301 aa13.16□□□□□ -0.3
TMEM53-202ENST00000372237 SLPIP03973 132 aa13.16□□□□□ -0.3
TMEM53-202ENST00000372237 NBEAL2Q6ZNJ1 2754 aa13.15□□□□□ -0.3
TMEM53-202ENST00000372237 IGLV10-54A0A075B6I4 117 aa13.15□□□□□ -0.3
TMEM53-202ENST00000372237 ANGP03950 147 aaKnown RBP13.15□□□□□ -0.3
TMEM53-202ENST00000372237 CHCHD10Q8WYQ3 142 aaPredicted RBP13.15□□□□□ -0.3
TMEM53-202ENST00000372237 OBSCN-AS1Q96MR7 158 aa13.14□□□□□ -0.31
TMEM53-202ENST00000372237 KIAA0087Q14695 138 aa13.14□□□□□ -0.31
TMEM53-202ENST00000372237 C9orf66Q5T8R8 295 aa13.14□□□□□ -0.31
TMEM53-202ENST00000372237 SPATA3Q8NHX4 192 aa13.14□□□□□ -0.31
TMEM53-202ENST00000372237 CXCL5P42830 114 aa13.13□□□□□ -0.31
TMEM53-202ENST00000372237 PRR3P79522 188 aaKnown RBP13.13□□□□□ -0.31
TMEM53-202ENST00000372237 REG3AQ06141 175 aa13.13□□□□□ -0.31
TMEM53-202ENST00000372237 Q8N3U1 123 aa13.13□□□□□ -0.31
TMEM53-202ENST00000372237 ORMDL1Q9P0S3 153 aa13.13□□□□□ -0.31
TMEM53-202ENST00000372237 COX17Q14061 63 aa13.13□□□□□ -0.31
TMEM53-202ENST00000372237 KLK5Q9Y337 293 aaPredicted RBP13.13□□□□□ -0.31
TMEM53-202ENST00000372237 NCR3O14931 201 aa13.12□□□□□ -0.31
TMEM53-202ENST00000372237 DAD1P61803 113 aa13.12□□□□□ -0.31
TMEM53-202ENST00000372237 NDUFC2O95298 119 aa13.11□□□□□ -0.31
TMEM53-202ENST00000372237 VWFP04275 2813 aa13.11□□□□□ -0.31
TMEM53-202ENST00000372237 IGHV4-28A0A0C4DH34 117 aa13.1□□□□□ -0.31
TMEM53-202ENST00000372237 NANOS2P60321 138 aaKnown RBP13.1□□□□□ -0.31
TMEM53-202ENST00000372237 TENM1Q9UKZ4 2725 aa13.1□□□□□ -0.31
TMEM53-202ENST00000372237 TMEM126AQ9H061 195 aa13.1□□□□□ -0.31
TMEM53-202ENST00000372237 APOC4P55056 127 aa13.09□□□□□ -0.31
TMEM53-202ENST00000372237 C9orf116Q5BN46 136 aaPredicted RBP13.09□□□□□ -0.31
TMEM53-202ENST00000372237 A0A1B0GX51 115 aa13.07□□□□□ -0.32
TMEM53-202ENST00000372237 LINC00846Q9NV44 126 aa13.07□□□□□ -0.32
TMEM53-202ENST00000372237 Q8N814 137 aa13.06□□□□□ -0.32
TMEM53-202ENST00000372237 CELA1Q9UNI1 258 aa13.06□□□□□ -0.32
TMEM53-202ENST00000372237 ATRQ13535 2644 aa13.06□□□□□ -0.32
TMEM53-202ENST00000372237 F8P00451 2351 aa13.06□□□□□ -0.32
TMEM53-202ENST00000372237 LINC00167Q96N53 147 aa13.05□□□□□ -0.32
TMEM53-202ENST00000372237 HTN3P15516 51 aa13.03□□□□□ -0.32
TMEM53-202ENST00000372237 Q8NAQ8 132 aa13.03□□□□□ -0.32
TMEM53-202ENST00000372237 TMEM256-PLSCR3K7ERE1 68 aa13.02□□□□□ -0.33
TMEM53-202ENST00000372237 MIFP14174 115 aa13.02□□□□□ -0.33
TMEM53-202ENST00000372237 C3orf56Q8N813 242 aa13.02□□□□□ -0.33
TMEM53-202ENST00000372237 IGKV3D-7A0A0C4DH55 119 aa13.01□□□□□ -0.33
TMEM53-202ENST00000372237 JMJD7-PLA2G4BH0Y9G9 81 aa13.01□□□□□ -0.33
TMEM53-202ENST00000372237 C6orf99Q4VX62 202 aa13.01□□□□□ -0.33
TMEM53-202ENST00000372237 S100A7L2Q5SY68 101 aa13.01□□□□□ -0.33
TMEM53-202ENST00000372237 TEP1Q99973 2627 aaKnown RBP13.01□□□□□ -0.33
TMEM53-202ENST00000372237 Q6JHZ5 121 aa13.01□□□□□ -0.33
TMEM53-202ENST00000372237 Q8NDZ9 215 aa13.01□□□□□ -0.33
TMEM53-202ENST00000372237 CCKP06307 115 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 SPAG11BQ08648 103 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 LELP1Q5T871 98 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 C6orf223Q8N319 242 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 C3orf22Q8N5N4 141 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 SPART-AS1P0CW21 52 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 C10orf25Q5T742 122 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 UNQ6190/PRO20217Q6UXQ8 127 aa13□□□□□ -0.33
TMEM53-202ENST00000372237 UQCRQO14949 82 aa12.99□□□□□ -0.33
TMEM53-202ENST00000372237 C9orf153Q5TBE3 101 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms