RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 C6orf226Q5I0X4 101 aa12.88□□□□□ -0.35
KHDC3L-201ENST00000370367 PHF5AQ7RTV0 110 aaKnown RBP12.88□□□□□ -0.35
KHDC3L-201ENST00000370367 SMCO4Q9NRQ5 59 aa12.88□□□□□ -0.35
KHDC3L-201ENST00000370367 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
KHDC3L-201ENST00000370367 PSORS1C2Q9UIG4 136 aa12.88□□□□□ -0.35
KHDC3L-201ENST00000370367 TOMM7Q9P0U1 55 aa12.87□□□□□ -0.35
KHDC3L-201ENST00000370367 TINCRA0A1B0GVN0 87 aa12.86□□□□□ -0.35
KHDC3L-201ENST00000370367 CXCL5P42830 114 aa12.86□□□□□ -0.35
KHDC3L-201ENST00000370367 NDUFA5Q16718 116 aa12.86□□□□□ -0.35
KHDC3L-201ENST00000370367 IGLV5-45A0A087WSX0 123 aa12.85□□□□□ -0.35
KHDC3L-201ENST00000370367 SVBPQ8N300 66 aa12.85□□□□□ -0.35
KHDC3L-201ENST00000370367 LINC00469Q8N7U9 141 aa12.85□□□□□ -0.35
KHDC3L-201ENST00000370367 FAM168BA1KXE4 195 aa12.84□□□□□ -0.35
KHDC3L-201ENST00000370367 SNAPINO95295 136 aa12.84□□□□□ -0.35
KHDC3L-201ENST00000370367 CST9LQ9H4G1 147 aa12.84□□□□□ -0.35
KHDC3L-201ENST00000370367 PLA2G2DQ9UNK4 145 aa12.84□□□□□ -0.35
KHDC3L-201ENST00000370367 F8VRH5 84 aa12.83□□□□□ -0.36
KHDC3L-201ENST00000370367 APOC3P02656 99 aa12.83□□□□□ -0.36
KHDC3L-201ENST00000370367 PMVKQ15126 192 aa12.83□□□□□ -0.36
KHDC3L-201ENST00000370367 FAM19A5Q7Z5A7 132 aaPredicted RBP12.83□□□□□ -0.36
KHDC3L-201ENST00000370367 TRAPPC1Q9Y5R8 145 aa12.83□□□□□ -0.36
KHDC3L-201ENST00000370367 SMIM1B2RUZ4 78 aa12.82□□□□□ -0.36
KHDC3L-201ENST00000370367 ODF1Q14990 250 aa12.82□□□□□ -0.36
KHDC3L-201ENST00000370367 PDZD11Q5EBL8 140 aa12.82□□□□□ -0.36
KHDC3L-201ENST00000370367 C1orf137Q5JT78 98 aa12.82□□□□□ -0.36
KHDC3L-201ENST00000370367 C9orf129Q5T035 196 aaKnown RBP12.81□□□□□ -0.36
KHDC3L-201ENST00000370367 KRTAP7-1Q8IUC3 87 aa12.81□□□□□ -0.36
KHDC3L-201ENST00000370367 M0QXV9 152 aa12.8□□□□□ -0.36
KHDC3L-201ENST00000370367 C18orf32Q8TCD1 76 aa12.8□□□□□ -0.36
KHDC3L-201ENST00000370367 LINC00614P0C842 121 aa12.78□□□□□ -0.36
KHDC3L-201ENST00000370367 A0A096LNJ9 63 aa12.77□□□□□ -0.37
KHDC3L-201ENST00000370367 IGLV7-43P04211 117 aa12.77□□□□□ -0.37
KHDC3L-201ENST00000370367 KRTAP10-8P60410 259 aa12.77□□□□□ -0.37
KHDC3L-201ENST00000370367 COX7B2Q8TF08 81 aa12.77□□□□□ -0.37
KHDC3L-201ENST00000370367 H3BRM9 83 aa12.76□□□□□ -0.37
KHDC3L-201ENST00000370367 HBDP02042 147 aa12.76□□□□□ -0.37
KHDC3L-201ENST00000370367 RAB5BP61020 215 aa12.76□□□□□ -0.37
KHDC3L-201ENST00000370367 URB1-AS1Q96HZ7 61 aa12.76□□□□□ -0.37
KHDC3L-201ENST00000370367 UBE2BP63146 152 aa12.75□□□□□ -0.37
KHDC3L-201ENST00000370367 KRTAP11-1Q8IUC1 163 aa12.75□□□□□ -0.37
KHDC3L-201ENST00000370367 DIRC1Q969H9 104 aa12.75□□□□□ -0.37
KHDC3L-201ENST00000370367 IGLC3P0DOY3 106 aa12.74□□□□□ -0.37
KHDC3L-201ENST00000370367 ATP5LO75964 103 aa12.72□□□□□ -0.37
KHDC3L-201ENST00000370367 SPINK8P0C7L1 97 aa12.72□□□□□ -0.37
KHDC3L-201ENST00000370367 XAGE1AQ9HD64 81 aa12.72□□□□□ -0.37
KHDC3L-201ENST00000370367 TP73-AS1Q9UF72 201 aa12.72□□□□□ -0.37
KHDC3L-201ENST00000370367 LBHQ53QV2 105 aaPredicted RBP12.71□□□□□ -0.37
KHDC3L-201ENST00000370367 YPEL4Q96NS1 127 aa12.71□□□□□ -0.37
KHDC3L-201ENST00000370367 C22orf24Q9Y442 160 aa12.7□□□□□ -0.38
KHDC3L-201ENST00000370367 IGLV5-39A0A0G2JS06 123 aa12.69□□□□□ -0.38
KHDC3L-201ENST00000370367 H0Y9J4 135 aa12.69□□□□□ -0.38
KHDC3L-201ENST00000370367 NDUFA6P56556 154 aa12.69□□□□□ -0.38
KHDC3L-201ENST00000370367 NUPR1O60356 82 aa12.67□□□□□ -0.38
KHDC3L-201ENST00000370367 ZNF22P17026 224 aaPredicted RBP12.67□□□□□ -0.38
KHDC3L-201ENST00000370367 PMCHL1Q16048 86 aa12.67□□□□□ -0.38
KHDC3L-201ENST00000370367 UBR4Q5T4S7 5183 aa12.67□□□□□ -0.38
KHDC3L-201ENST00000370367 CHCHD1Q96BP2 118 aaKnown RBP12.66□□□□□ -0.38
KHDC3L-201ENST00000370367 MRPL55Q7Z7F7 128 aaKnown RBP12.65□□□□□ -0.38
KHDC3L-201ENST00000370367 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
KHDC3L-201ENST00000370367 BAGE3Q86Y29 109 aa12.64□□□□□ -0.39
KHDC3L-201ENST00000370367 IGLV5-37A0A075B6J1 123 aa12.62□□□□□ -0.39
KHDC3L-201ENST00000370367 C11orf86A6NJI1 115 aa12.61□□□□□ -0.39
KHDC3L-201ENST00000370367 ZNF861PO60384 105 aa12.61□□□□□ -0.39
KHDC3L-201ENST00000370367 IGLV1-50A0A075B6I6 118 aa12.6□□□□□ -0.39
KHDC3L-201ENST00000370367 COX17Q14061 63 aa12.6□□□□□ -0.39
KHDC3L-201ENST00000370367 TRAV12-1A0A0B4J245 112 aa12.59□□□□□ -0.39
KHDC3L-201ENST00000370367 TMEM170BQ5T4T1 132 aa12.59□□□□□ -0.39
KHDC3L-201ENST00000370367 CBLN2Q8IUK8 224 aa12.59□□□□□ -0.39
KHDC3L-201ENST00000370367 CHTOPQ9Y3Y2 248 aaKnown RBP12.59□□□□□ -0.39
KHDC3L-201ENST00000370367 KRTAP1-4P0C5Y4 121 aa12.58□□□□□ -0.4
KHDC3L-201ENST00000370367 PRR26Q8N8Z3 221 aa12.57□□□□□ -0.4
KHDC3L-201ENST00000370367 IFI27L1Q96BM0 104 aa12.57□□□□□ -0.4
KHDC3L-201ENST00000370367 LINC00167Q96N53 147 aa12.57□□□□□ -0.4
KHDC3L-201ENST00000370367 ERG28Q9UKR5 140 aa12.57□□□□□ -0.4
KHDC3L-201ENST00000370367 LRP2P98164 4655 aa12.56□□□□□ -0.4
KHDC3L-201ENST00000370367 BCE1O60756 84 aa12.56□□□□□ -0.4
KHDC3L-201ENST00000370367 NKAPP1Q8N9T2 125 aa12.56□□□□□ -0.4
KHDC3L-201ENST00000370367 PFN2P35080 140 aa12.55□□□□□ -0.4
KHDC3L-201ENST00000370367 HSBP1O75506 76 aa12.54□□□□□ -0.4
KHDC3L-201ENST00000370367 RPL13AP40429 203 aaKnown RBP12.54□□□□□ -0.4
KHDC3L-201ENST00000370367 RPL28P46779 137 aaKnown RBP12.54□□□□□ -0.4
KHDC3L-201ENST00000370367 ZNF625Q96I27 306 aaPredicted RBP12.54□□□□□ -0.4
KHDC3L-201ENST00000370367 SND1-IT1Q9HBX3 110 aa12.53□□□□□ -0.4
KHDC3L-201ENST00000370367 TMEM223A0PJW6 202 aa12.52□□□□□ -0.41
KHDC3L-201ENST00000370367 RPL37AP8A6NKH3 93 aa12.51□□□□□ -0.41
KHDC3L-201ENST00000370367 TRGC2P03986 189 aa12.51□□□□□ -0.41
KHDC3L-201ENST00000370367 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
KHDC3L-201ENST00000370367 RPL24P83731 157 aaKnown RBP12.5□□□□□ -0.41
KHDC3L-201ENST00000370367 VPREB1P12018 145 aa12.49□□□□□ -0.41
KHDC3L-201ENST00000370367 FAM19A2Q8N3H0 131 aa12.48□□□□□ -0.41
KHDC3L-201ENST00000370367 KRTAP13-1Q8IUC0 172 aa12.46□□□□□ -0.41
KHDC3L-201ENST00000370367 SLC7A5P1Q8MH63 180 aa12.46□□□□□ -0.41
KHDC3L-201ENST00000370367 LEPROTL1O95214 131 aa12.45□□□□□ -0.42
KHDC3L-201ENST00000370367 IGKV2-28A0A075B6P5 120 aa12.44□□□□□ -0.42
KHDC3L-201ENST00000370367 SERF1AO75920 110 aa12.44□□□□□ -0.42
KHDC3L-201ENST00000370367 IGKV2D-28P01615 120 aa12.44□□□□□ -0.42
KHDC3L-201ENST00000370367 LINC00310P59036 64 aa12.44□□□□□ -0.42
KHDC3L-201ENST00000370367 UBE2AP49459 152 aa12.43□□□□□ -0.42
KHDC3L-201ENST00000370367 LINC00158P58513 81 aa12.43□□□□□ -0.42
KHDC3L-201ENST00000370367 HERV-K104P63124 156 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms