RNA–Protein interactions for RNA: ENST00000362588.1

RNU4-35P-201, Transcript of RNA, U4 small nuclear 35, pseudogene, humanhuman

BASIC

Gene RNU4-35P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-35P-201ENST00000362588 LINC00614P0C842 121 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 MT1HL1P0DM35 61 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 NDUFA6P56556 154 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 HERVK_113P63121 156 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 RNF151Q2KHN1 245 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 C9orf129Q5T035 196 aaKnown RBP2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 SERTAD4-AS1Q5TG53 156 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 FAM19A3Q7Z5A8 133 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 Q8IZM0 81 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 PACRGQ96M98 296 aaPredicted RBP2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 CST9LQ9H4G1 147 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 XAGE1AQ9HD64 81 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 PSORS1C2Q9UIG4 136 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
RNU4-35P-201ENST00000362588 IGLV5-45A0A087WSX0 123 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 TRBV30A0A0K0K1B3 111 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 TINCRA0A1B0GVN0 87 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 C11orf86A6NJI1 115 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 NDUFC2-KCTD14E9PQ53 114 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 M0QXV9 152 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 TRGC2P03986 189 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 NPSP0C0P6 89 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 TLX1NBP0CAT3 122 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 IGLC3P0DOY3 106 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 ZNF22P17026 224 aaPredicted RBP2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 LINC00310P59036 64 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 RAB5BP61020 215 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 CKS1BP61024 79 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 PMVKQ15126 192 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 PDZD11Q5EBL8 140 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 C6orf226Q5I0X4 101 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 C1orf137Q5JT78 98 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 PAPPA-AS1Q5QFB9 102 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 LINC01561Q8N1V8 128 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 FAM19A2Q8N3H0 131 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 COX7B2Q8TF08 81 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 LINC00474Q9P2X8 69 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 PKIGQ9Y2B9 76 aa2.14□□□□□ -2.07
RNU4-35P-201ENST00000362588 F8VRH5 84 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 F8WDY8 70 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 H0Y8G0 127 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 NUPR1O60356 82 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 OXTP01178 125 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 G0S2P27469 103 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 UBE2BP63146 152 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 SEC11AP67812 179 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 BAGE3Q86Y29 109 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 ZNF625Q96I27 306 aaPredicted RBP2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 HERC1Q15751 4861 aa2.13□□□□□ -2.07
RNU4-35P-201ENST00000362588 TNXBP22105 4242 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 IGLV5-39A0A0G2JS06 123 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 A0A0U1RRA0 63 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 GAGE10A6NGK3 116 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 COLCA2A8K830 154 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 H3BRM9 83 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 HSBP1O75506 76 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 SERF1AO75920 110 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 ATP5LO75964 103 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 IGLV7-43P04211 117 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 PFN2P35080 140 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 CXCL5P42830 114 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 SRSF9Q13242 221 aaKnown RBP eCLIP2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 TMEM170BQ5T4T1 132 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 Q8NDZ9 215 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 IFI27L1Q96BM0 104 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 PMCHL2Q9BQD1 86 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 CHTOPQ9Y3Y2 248 aaKnown RBP2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 C22orf24Q9Y442 160 aa2.12□□□□□ -2.07
RNU4-35P-201ENST00000362588 TMEM223A0PJW6 202 aa2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 LINC01549A6NIU2 74 aa2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 RPL37AP8A6NKH3 93 aa2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 FABP4P15090 132 aa2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 SPINK6Q6UWN8 80 aa2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 CHCHD1Q96BP2 118 aaKnown RBP2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 LINC01600Q96MT4 127 aa2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 ERG28Q9UKR5 140 aa2.11□□□□□ -2.07
RNU4-35P-201ENST00000362588 IGKV2-28A0A075B6P5 120 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 TRAV12-1A0A0B4J245 112 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 H0Y9J4 135 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 LEPROTL1O95214 131 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 IGKV2D-28P01615 120 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 KRTAP1-4P0C5Y4 121 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 TSPEAR-AS2P59090 65 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 KRTAP10-8P60410 259 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 REG3GQ6UW15 175 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 MRPL55Q7Z7F7 128 aaKnown RBP2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 PRR26Q8N8Z3 221 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 LINC00167Q96N53 147 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 SND1-IT1Q9HBX3 110 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 PLA2G2DQ9UNK4 145 aa2.1□□□□□ -2.07
RNU4-35P-201ENST00000362588 TMEM238C9JI98 176 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 HIST1H2BKO60814 126 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 HIST1H2BJP06899 126 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 SMIM13P0DJ93 91 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 VPREB1P12018 145 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 HIST1H2BOP23527 126 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 HIST1H2BBP33778 126 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 LINC00158P58513 81 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 HIST1H2BDP58876 126 aa2.09□□□□□ -2.07
RNU4-35P-201ENST00000362588 HIST1H2BCP62807 126 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms