RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 PKIGQ9Y2B9 76 aa12.23□□□□□ -0.45
NPAS3-202ENST00000356141 MIFP14174 115 aa12.22□□□□□ -0.45
NPAS3-202ENST00000356141 Q6ZTC4 211 aa12.22□□□□□ -0.45
NPAS3-202ENST00000356141 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
NPAS3-202ENST00000356141 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
NPAS3-202ENST00000356141 COL7A1Q02388 2944 aa12.21□□□□□ -0.45
NPAS3-202ENST00000356141 A0A0J9YWU9 116 aa12.21□□□□□ -0.45
NPAS3-202ENST00000356141 NANOS2P60321 138 aaKnown RBP12.21□□□□□ -0.46
NPAS3-202ENST00000356141 ANKRD29Q8N6D5 301 aa12.21□□□□□ -0.46
NPAS3-202ENST00000356141 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
NPAS3-202ENST00000356141 LINC00269Q8N2A0 174 aa12.2□□□□□ -0.46
NPAS3-202ENST00000356141 ANGP03950 147 aaKnown RBP12.19□□□□□ -0.46
NPAS3-202ENST00000356141 HERVK_113P63121 156 aa12.19□□□□□ -0.46
NPAS3-202ENST00000356141 C9JAW5 83 aa12.19□□□□□ -0.46
NPAS3-202ENST00000356141 STAB2Q8WWQ8 2551 aa12.18□□□□□ -0.46
NPAS3-202ENST00000356141 CFC1BP0CG36 223 aa12.18□□□□□ -0.46
NPAS3-202ENST00000356141 CFC1P0CG37 223 aa12.18□□□□□ -0.46
NPAS3-202ENST00000356141 LYSTQ99698 3801 aa12.18□□□□□ -0.46
NPAS3-202ENST00000356141 IGHV3-33P01772 117 aa12.17□□□□□ -0.46
NPAS3-202ENST00000356141 C4orf26Q17RF5 130 aa12.17□□□□□ -0.46
NPAS3-202ENST00000356141 LINC00526Q96FQ7 95 aa12.17□□□□□ -0.46
NPAS3-202ENST00000356141 DNAH3Q8TD57 4116 aa12.16□□□□□ -0.46
NPAS3-202ENST00000356141 TAL2Q16559 108 aa12.16□□□□□ -0.46
NPAS3-202ENST00000356141 LITAFQ99732 161 aa12.15□□□□□ -0.46
NPAS3-202ENST00000356141 TENM2Q9NT68 2774 aa12.15□□□□□ -0.46
NPAS3-202ENST00000356141 LINC00959A0A1B0GUT2 108 aa12.14□□□□□ -0.47
NPAS3-202ENST00000356141 Q1RN00 199 aa12.14□□□□□ -0.47
NPAS3-202ENST00000356141 C15orf53Q8NAA6 179 aa12.14□□□□□ -0.47
NPAS3-202ENST00000356141 OR13C6PQ8NH95 151 aa12.14□□□□□ -0.47
NPAS3-202ENST00000356141 J3KT08 172 aa12.13□□□□□ -0.47
NPAS3-202ENST00000356141 TCL1BO95988 128 aa12.13□□□□□ -0.47
NPAS3-202ENST00000356141 PFN2P35080 140 aa12.13□□□□□ -0.47
NPAS3-202ENST00000356141 EGFEM1PQ0D2K5 195 aa12.13□□□□□ -0.47
NPAS3-202ENST00000356141 C2orf82Q6UX34 121 aa12.13□□□□□ -0.47
NPAS3-202ENST00000356141 KLK5Q9Y337 293 aaPredicted RBP12.13□□□□□ -0.47
NPAS3-202ENST00000356141 KLK12Q9UKR0 248 aa12.12□□□□□ -0.47
NPAS3-202ENST00000356141 IGLV5-45A0A087WSX0 123 aa12.12□□□□□ -0.47
NPAS3-202ENST00000356141 SCGB1C2P0DMR2 95 aa12.12□□□□□ -0.47
NPAS3-202ENST00000356141 HUWE1Q7Z6Z7 4374 aaKnown RBP12.11□□□□□ -0.47
NPAS3-202ENST00000356141 ICOSQ9Y6W8 199 aa12.1□□□□□ -0.47
NPAS3-202ENST00000356141 KPRPQ5T749 579 aaPredicted RBP12.1□□□□□ -0.47
NPAS3-202ENST00000356141 WFDC10BQ8IUB3 73 aa12.09□□□□□ -0.47
NPAS3-202ENST00000356141 IGLV5-39A0A0G2JS06 123 aa12.09□□□□□ -0.47
NPAS3-202ENST00000356141 IGHV3OR16-9A0A0B4J2B5 98 aa12.08□□□□□ -0.48
NPAS3-202ENST00000356141 COX7B2Q8TF08 81 aa12.08□□□□□ -0.48
NPAS3-202ENST00000356141 K7EIL1 84 aa12.08□□□□□ -0.48
NPAS3-202ENST00000356141 REG3AQ06141 175 aa12.08□□□□□ -0.48
NPAS3-202ENST00000356141 HRCT1Q6UXD1 115 aa12.08□□□□□ -0.48
NPAS3-202ENST00000356141 NDUFA1O15239 70 aa12.07□□□□□ -0.48
NPAS3-202ENST00000356141 C9orf153Q5TBE3 101 aa12.07□□□□□ -0.48
NPAS3-202ENST00000356141 SOSTDC1Q6X4U4 206 aa12.07□□□□□ -0.48
NPAS3-202ENST00000356141 PRO1854Q9UHT4 67 aa12.07□□□□□ -0.48
NPAS3-202ENST00000356141 Q6Q795 121 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 CSMD3Q7Z407 3707 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 SLC25A20O43772 301 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 SS18Q15532 418 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 MIAQ16674 131 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 NTN5Q8WTR8 489 aaPredicted RBP12.06□□□□□ -0.48
NPAS3-202ENST00000356141 LINC00158P58513 81 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 C6orf226Q5I0X4 101 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 CHCHD10Q8WYQ3 142 aaPredicted RBP12.06□□□□□ -0.48
NPAS3-202ENST00000356141 UBE2WQ96B02 151 aa12.06□□□□□ -0.48
NPAS3-202ENST00000356141 TRAV8-4A0A0B4J246 113 aa12.05□□□□□ -0.48
NPAS3-202ENST00000356141 C9orf116Q5BN46 136 aaPredicted RBP12.05□□□□□ -0.48
NPAS3-202ENST00000356141 LYPD5Q6UWN5 251 aa12.05□□□□□ -0.48
NPAS3-202ENST00000356141 DEFB131BA0A096LNP1 70 aa12.05□□□□□ -0.48
NPAS3-202ENST00000356141 H7C423 109 aa12.05□□□□□ -0.48
NPAS3-202ENST00000356141 TGP01266 2768 aa12.03□□□□□ -0.48
NPAS3-202ENST00000356141 MIR7-3HGQ8N6C7 128 aa12.03□□□□□ -0.48
NPAS3-202ENST00000356141 C6orf223Q8N319 242 aa12.03□□□□□ -0.48
NPAS3-202ENST00000356141 MALP21145 153 aa12.02□□□□□ -0.48
NPAS3-202ENST00000356141 CIRBPQ14011 172 aaKnown RBP12.02□□□□□ -0.48
NPAS3-202ENST00000356141 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.48
NPAS3-202ENST00000356141 TEX49A0A1B0GTD5 131 aa12.02□□□□□ -0.49
NPAS3-202ENST00000356141 A0A087WZ39 114 aa12.01□□□□□ -0.49
NPAS3-202ENST00000356141 ESRGQ1W209 222 aa12.01□□□□□ -0.49
NPAS3-202ENST00000356141 A0A1B0GUV1 79 aa12□□□□□ -0.49
NPAS3-202ENST00000356141 OXTP01178 125 aa12□□□□□ -0.49
NPAS3-202ENST00000356141 RPL13AP40429 203 aaKnown RBP12□□□□□ -0.49
NPAS3-202ENST00000356141 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
NPAS3-202ENST00000356141 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
NPAS3-202ENST00000356141 LELP1Q5T871 98 aa11.99□□□□□ -0.49
NPAS3-202ENST00000356141 FAM19A3Q7Z5A8 133 aa11.99□□□□□ -0.49
NPAS3-202ENST00000356141 SPANXDQ9BXN6 97 aa11.98□□□□□ -0.49
NPAS3-202ENST00000356141 Q9HAA7 133 aa11.98□□□□□ -0.49
NPAS3-202ENST00000356141 SPANXCQ9NY87 97 aa11.98□□□□□ -0.49
NPAS3-202ENST00000356141 CLEC2BQ92478 149 aa11.98□□□□□ -0.49
NPAS3-202ENST00000356141 COX7A2LO14548 114 aa11.97□□□□□ -0.49
NPAS3-202ENST00000356141 TRIAP1O43715 76 aa11.97□□□□□ -0.49
NPAS3-202ENST00000356141 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
NPAS3-202ENST00000356141 FAM236DA0A1B0GTK5 79 aa11.96□□□□□ -0.49
NPAS3-202ENST00000356141 A0A1B0GX51 115 aa11.96□□□□□ -0.49
NPAS3-202ENST00000356141 FAM236CP0DP71 79 aa11.96□□□□□ -0.49
NPAS3-202ENST00000356141 ENHOQ6UWT2 76 aa11.96□□□□□ -0.49
NPAS3-202ENST00000356141 HIGD2BQ4VC39 106 aa11.96□□□□□ -0.5
NPAS3-202ENST00000356141 PRO0628Q9UI54 55 aa11.95□□□□□ -0.5
NPAS3-202ENST00000356141 MEGF8Q7Z7M0 2845 aa11.94□□□□□ -0.5
NPAS3-202ENST00000356141 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms