RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SMIM11BQ8TCY0 68 aa13.61□□□□□ -0.23
COL13A1-201ENST00000354547 FAM222AQ5U5X8 452 aa13.6□□□□□ -0.23
COL13A1-201ENST00000354547 Q8N3U1 123 aa13.6□□□□□ -0.23
COL13A1-201ENST00000354547 IGLV10-54A0A075B6I4 117 aa13.6□□□□□ -0.23
COL13A1-201ENST00000354547 DEFB135Q30KP9 77 aa13.6□□□□□ -0.23
COL13A1-201ENST00000354547 X6R8D5 127 aa13.59□□□□□ -0.23
COL13A1-201ENST00000354547 NHLRC4P0CG21 123 aaPredicted RBP13.59□□□□□ -0.23
COL13A1-201ENST00000354547 A0A087WYN8 130 aa13.58□□□□□ -0.24
COL13A1-201ENST00000354547 TRACP01848 142 aa13.58□□□□□ -0.24
COL13A1-201ENST00000354547 DEFB121Q5J5C9 76 aa13.58□□□□□ -0.24
COL13A1-201ENST00000354547 J3QKU1 62 aa13.57□□□□□ -0.24
COL13A1-201ENST00000354547 KIR2DL5BQ8NHK3 375 aa13.57□□□□□ -0.24
COL13A1-201ENST00000354547 RPL28P46779 137 aaKnown RBP13.57□□□□□ -0.24
COL13A1-201ENST00000354547 SS18Q15532 418 aa13.57□□□□□ -0.24
COL13A1-201ENST00000354547 PRO0255Q9UI72 69 aa13.56□□□□□ -0.24
COL13A1-201ENST00000354547 IBA57-AS1B1ANH7 110 aa13.56□□□□□ -0.24
COL13A1-201ENST00000354547 LINC00269Q8N2A0 174 aa13.56□□□□□ -0.24
COL13A1-201ENST00000354547 DNAL4O96015 105 aa13.55□□□□□ -0.24
COL13A1-201ENST00000354547 PRR3P79522 188 aaKnown RBP13.55□□□□□ -0.24
COL13A1-201ENST00000354547 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
COL13A1-201ENST00000354547 B5MCH6 92 aa13.54□□□□□ -0.24
COL13A1-201ENST00000354547 HTN3P15516 51 aa13.54□□□□□ -0.24
COL13A1-201ENST00000354547 GAGE2AQ6NT46 116 aa13.54□□□□□ -0.24
COL13A1-201ENST00000354547 LY6G6DO95868 133 aa13.53□□□□□ -0.24
COL13A1-201ENST00000354547 FAM240AA0A1B0GVK7 77 aa13.53□□□□□ -0.24
COL13A1-201ENST00000354547 SLPIP03973 132 aa13.53□□□□□ -0.24
COL13A1-201ENST00000354547 TRRAPQ9Y4A5 3859 aa13.53□□□□□ -0.24
COL13A1-201ENST00000354547 MALP21145 153 aa13.53□□□□□ -0.24
COL13A1-201ENST00000354547 SMCR5Q8TEV8 140 aa13.52□□□□□ -0.24
COL13A1-201ENST00000354547 CCDC179H3BU77 68 aa13.52□□□□□ -0.25
COL13A1-201ENST00000354547 LECT2O14960 151 aa13.52□□□□□ -0.25
COL13A1-201ENST00000354547 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
COL13A1-201ENST00000354547 C9orf129Q5T035 196 aaKnown RBP13.52□□□□□ -0.25
COL13A1-201ENST00000354547 NSD1Q96L73 2696 aaPredicted RBP13.51□□□□□ -0.25
COL13A1-201ENST00000354547 LINC00612Q8N6U2 182 aa13.5□□□□□ -0.25
COL13A1-201ENST00000354547 C9orf116Q5BN46 136 aaPredicted RBP13.5□□□□□ -0.25
COL13A1-201ENST00000354547 INAFM1C9JVW0 142 aa13.49□□□□□ -0.25
COL13A1-201ENST00000354547 Q6Q795 121 aa13.49□□□□□ -0.25
COL13A1-201ENST00000354547 SS18L2Q9UHA2 77 aa13.49□□□□□ -0.25
COL13A1-201ENST00000354547 A0A1B0GUV1 79 aa13.48□□□□□ -0.25
COL13A1-201ENST00000354547 DAD1P61803 113 aa13.48□□□□□ -0.25
COL13A1-201ENST00000354547 C14orf132Q9NPU4 83 aa13.48□□□□□ -0.25
COL13A1-201ENST00000354547 TEP1Q99973 2627 aaKnown RBP13.47□□□□□ -0.25
COL13A1-201ENST00000354547 IGHV4-28A0A0C4DH34 117 aa13.47□□□□□ -0.25
COL13A1-201ENST00000354547 CHCHD10Q8WYQ3 142 aaPredicted RBP13.47□□□□□ -0.25
COL13A1-201ENST00000354547 LINC00526Q96FQ7 95 aa13.47□□□□□ -0.25
COL13A1-201ENST00000354547 CELA1Q9UNI1 258 aa13.47□□□□□ -0.25
COL13A1-201ENST00000354547 MRPL23Q16540 153 aaKnown RBP13.45□□□□□ -0.26
COL13A1-201ENST00000354547 Q8IZM0 81 aa13.45□□□□□ -0.26
COL13A1-201ENST00000354547 SMIM9A6NGZ8 99 aa13.45□□□□□ -0.26
COL13A1-201ENST00000354547 ACYP1P07311 99 aa13.45□□□□□ -0.26
COL13A1-201ENST00000354547 REG3AQ06141 175 aa13.44□□□□□ -0.26
COL13A1-201ENST00000354547 C9orf66Q5T8R8 295 aa13.44□□□□□ -0.26
COL13A1-201ENST00000354547 PPDPFQ9H3Y8 114 aa13.44□□□□□ -0.26
COL13A1-201ENST00000354547 NCR3O14931 201 aa13.44□□□□□ -0.26
COL13A1-201ENST00000354547 H0YGX0 51 aa13.43□□□□□ -0.26
COL13A1-201ENST00000354547 FAM236AA0A1B0GUQ0 79 aa13.43□□□□□ -0.26
COL13A1-201ENST00000354547 FAM236BA0A1B0GV22 79 aa13.43□□□□□ -0.26
COL13A1-201ENST00000354547 INAFM2P0DMQ5 153 aa13.43□□□□□ -0.26
COL13A1-201ENST00000354547 HIVEP1P15822 2718 aa13.43□□□□□ -0.26
COL13A1-201ENST00000354547 LYRM9A8MSI8 78 aa13.42□□□□□ -0.26
COL13A1-201ENST00000354547 C3orf56Q8N813 242 aa13.42□□□□□ -0.26
COL13A1-201ENST00000354547 CD164L2Q6UWJ8 174 aa13.41□□□□□ -0.26
COL13A1-201ENST00000354547 C6orf223Q8N319 242 aa13.4□□□□□ -0.26
COL13A1-201ENST00000354547 KMT2BQ9UMN6 2715 aaPredicted RBP13.4□□□□□ -0.26
COL13A1-201ENST00000354547 TRBV7-7A0A0K0K1E9 115 aa13.39□□□□□ -0.27
COL13A1-201ENST00000354547 KIAA0087Q14695 138 aa13.39□□□□□ -0.27
COL13A1-201ENST00000354547 LINC00643Q86TS7 51 aa13.39□□□□□ -0.27
COL13A1-201ENST00000354547 APOC4P55056 127 aa13.38□□□□□ -0.27
COL13A1-201ENST00000354547 C10orf25Q5T742 122 aa13.36□□□□□ -0.27
COL13A1-201ENST00000354547 KLK12Q9UKR0 248 aa13.36□□□□□ -0.27
COL13A1-201ENST00000354547 UNQ6190/PRO20217Q6UXQ8 127 aa13.35□□□□□ -0.27
COL13A1-201ENST00000354547 Q8NDZ9 215 aa13.35□□□□□ -0.27
COL13A1-201ENST00000354547 NANOS2P60321 138 aaKnown RBP13.35□□□□□ -0.27
COL13A1-201ENST00000354547 PKD1L1Q8TDX9 2849 aa13.34□□□□□ -0.27
COL13A1-201ENST00000354547 ORMDL1Q9P0S3 153 aa13.34□□□□□ -0.27
COL13A1-201ENST00000354547 SDIM1Q6ZPB5 146 aa13.34□□□□□ -0.27
COL13A1-201ENST00000354547 Q8NAQ8 132 aa13.34□□□□□ -0.27
COL13A1-201ENST00000354547 IGKV3D-7A0A0C4DH55 119 aa13.33□□□□□ -0.28
COL13A1-201ENST00000354547 SPART-AS1P0CW21 52 aa13.31□□□□□ -0.28
COL13A1-201ENST00000354547 SPAG11BQ08648 103 aa13.31□□□□□ -0.28
COL13A1-201ENST00000354547 S100A7L2Q5SY68 101 aa13.31□□□□□ -0.28
COL13A1-201ENST00000354547 LINC00846Q9NV44 126 aa13.31□□□□□ -0.28
COL13A1-201ENST00000354547 C6orf99Q4VX62 202 aa13.31□□□□□ -0.28
COL13A1-201ENST00000354547 IGHV4-30-4P0DP06 118 aa13.3□□□□□ -0.28
COL13A1-201ENST00000354547 TMEM126AQ9H061 195 aa13.29□□□□□ -0.28
COL13A1-201ENST00000354547 KLK5Q9Y337 293 aaPredicted RBP13.29□□□□□ -0.28
COL13A1-201ENST00000354547 CXCL5P42830 114 aa13.28□□□□□ -0.28
COL13A1-201ENST00000354547 Q8N814 137 aa13.28□□□□□ -0.28
COL13A1-201ENST00000354547 IMUPQ9GZP8 106 aa13.28□□□□□ -0.28
COL13A1-201ENST00000354547 CYSRT1A8MQ03 144 aa13.28□□□□□ -0.28
COL13A1-201ENST00000354547 MIFP14174 115 aa13.28□□□□□ -0.28
COL13A1-201ENST00000354547 COX17Q14061 63 aa13.27□□□□□ -0.29
COL13A1-201ENST00000354547 LINC01561Q8N1V8 128 aa13.27□□□□□ -0.29
COL13A1-201ENST00000354547 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
COL13A1-201ENST00000354547 LELP1Q5T871 98 aa13.25□□□□□ -0.29
COL13A1-201ENST00000354547 RETNQ9HD89 108 aa13.25□□□□□ -0.29
COL13A1-201ENST00000354547 XAGE1AQ9HD64 81 aa13.25□□□□□ -0.29
COL13A1-201ENST00000354547 OBSCN-AS1Q96MR7 158 aa13.24□□□□□ -0.29
COL13A1-201ENST00000354547 NDUFC2O95298 119 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms