RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PRO0255Q9UI72 69 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 A0A096LPF7 62 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 TRBV6-8A0A0A6YYG3 113 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 A0A0J9YY99 117 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 FAM240AA0A1B0GVK7 77 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 TINCRA0A1B0GVN0 87 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 J3QQQ9 107 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 CDC42SE2Q9NRR3 84 aa6.43□□□□□ -1.38
ATG4A-202ENST00000345734 TRAV8-3A0A0A6YYJ7 113 aa6.42□□□□□ -1.38
ATG4A-202ENST00000345734 LEPROTO15243 131 aa6.42□□□□□ -1.38
ATG4A-202ENST00000345734 COX6A2Q02221 97 aa6.42□□□□□ -1.38
ATG4A-202ENST00000345734 C15orf53Q8NAA6 179 aa6.42□□□□□ -1.38
ATG4A-202ENST00000345734 SPART-AS1P0CW21 52 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 LGALS3P17931 250 aaKnown RBP6.41□□□□□ -1.38
ATG4A-202ENST00000345734 RPL13AP40429 203 aaKnown RBP6.41□□□□□ -1.38
ATG4A-202ENST00000345734 SCGB1D4Q6XE38 83 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 VSIG2Q96IQ7 327 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 TRAV13-1A0A0B4J241 112 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 TRAV8-4A0A0B4J246 113 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 A8MZ25 164 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 CRYGAP11844 174 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 TMEM258P61165 79 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 LINC00242Q5T6M2 205 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 HIST1H4GQ99525 98 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 CHCHD5Q9BSY4 110 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 CDKN2A-AS1Q9UH64 79 aa6.41□□□□□ -1.38
ATG4A-202ENST00000345734 IGLV4-60A0A075B6I1 120 aa6.4□□□□□ -1.38
ATG4A-202ENST00000345734 IGHV3-30-3P0DP02 117 aa6.4□□□□□ -1.38
ATG4A-202ENST00000345734 HTN3P15516 51 aa6.4□□□□□ -1.38
ATG4A-202ENST00000345734 PSMB2P49721 201 aa6.4□□□□□ -1.38
ATG4A-202ENST00000345734 MGAM2Q2M2H8 2515 aa6.4□□□□□ -1.38
ATG4A-202ENST00000345734 IGHV1-58A0A0C4DH39 117 aa6.4□□□□□ -1.39
ATG4A-202ENST00000345734 H7C423 109 aa6.4□□□□□ -1.39
ATG4A-202ENST00000345734 V9GYY9 64 aa6.4□□□□□ -1.39
ATG4A-202ENST00000345734 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
ATG4A-202ENST00000345734 LOC100996750A0A140TA64 210 aa6.39□□□□□ -1.39
ATG4A-202ENST00000345734 PRB2P02812 416 aaPredicted RBP6.39□□□□□ -1.39
ATG4A-202ENST00000345734 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
ATG4A-202ENST00000345734 IGKV3OR2-268A0A0C4DH90 116 aa6.38□□□□□ -1.39
ATG4A-202ENST00000345734 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
ATG4A-202ENST00000345734 GAGE2AQ6NT46 116 aa6.38□□□□□ -1.39
ATG4A-202ENST00000345734 FAM19A3Q7Z5A8 133 aa6.38□□□□□ -1.39
ATG4A-202ENST00000345734 DNAH9Q9NYC9 4486 aa6.38□□□□□ -1.39
ATG4A-202ENST00000345734 SLC25A20O43772 301 aa6.38□□□□□ -1.39
ATG4A-202ENST00000345734 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
ATG4A-202ENST00000345734 LOC107984156A0A0G2JMH3 177 aa6.37□□□□□ -1.39
ATG4A-202ENST00000345734 COX7CP15954 63 aa6.37□□□□□ -1.39
ATG4A-202ENST00000345734 ARL17AQ8IVW1 177 aa6.37□□□□□ -1.39
ATG4A-202ENST00000345734 A0A0J9YXY3 114 aa6.36□□□□□ -1.39
ATG4A-202ENST00000345734 Q5XG85 94 aa6.36□□□□□ -1.39
ATG4A-202ENST00000345734 NDUFA12Q9UI09 145 aa6.36□□□□□ -1.39
ATG4A-202ENST00000345734 TCL1BO95988 128 aa6.35□□□□□ -1.39
ATG4A-202ENST00000345734 DPH3Q96FX2 82 aa6.35□□□□□ -1.39
ATG4A-202ENST00000345734 IGLV5-39A0A0G2JS06 123 aa6.35□□□□□ -1.39
ATG4A-202ENST00000345734 SMIM1B2RUZ4 78 aa6.35□□□□□ -1.39
ATG4A-202ENST00000345734 IGHV3-30P01768 117 aa6.35□□□□□ -1.39
ATG4A-202ENST00000345734 IGHV3-30-5P0DP03 117 aa6.35□□□□□ -1.39
ATG4A-202ENST00000345734 HRCT1Q6UXD1 115 aa6.35□□□□□ -1.39
ATG4A-202ENST00000345734 A0A0J9YWU9 116 aa6.34□□□□□ -1.39
ATG4A-202ENST00000345734 FAM236AA0A1B0GUQ0 79 aa6.34□□□□□ -1.39
ATG4A-202ENST00000345734 FAM236BA0A1B0GV22 79 aa6.34□□□□□ -1.39
ATG4A-202ENST00000345734 ACYP1P07311 99 aa6.34□□□□□ -1.39
ATG4A-202ENST00000345734 TRACP01848 142 aa6.34□□□□□ -1.4
ATG4A-202ENST00000345734 CLPSL2Q6UWE3 100 aa6.34□□□□□ -1.4
ATG4A-202ENST00000345734 Q6ZTC4 211 aa6.34□□□□□ -1.4
ATG4A-202ENST00000345734 ICOSQ9Y6W8 199 aa6.34□□□□□ -1.4
ATG4A-202ENST00000345734 A0A1B0GUV1 79 aa6.33□□□□□ -1.4
ATG4A-202ENST00000345734 K7EIL1 84 aa6.33□□□□□ -1.4
ATG4A-202ENST00000345734 CXCL5P42830 114 aa6.33□□□□□ -1.4
ATG4A-202ENST00000345734 LITAFQ99732 161 aa6.33□□□□□ -1.4
ATG4A-202ENST00000345734 C11orf68Q9H3H3 251 aaKnown RBP6.33□□□□□ -1.4
ATG4A-202ENST00000345734 LINC00959A0A1B0GUT2 108 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 C4orf26Q17RF5 130 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 ADAMTSL4-AS1Q5T5F5 129 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 UBE2WQ96B02 151 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 NDUFA1O15239 70 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 NANOS2P60321 138 aaKnown RBP6.32□□□□□ -1.4
ATG4A-202ENST00000345734 DEFB121Q5J5C9 76 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 MUSTN1Q8IVN3 82 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 Q9H8V8 135 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 COL7A1Q02388 2944 aa6.32□□□□□ -1.4
ATG4A-202ENST00000345734 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
ATG4A-202ENST00000345734 ATOX1O00244 68 aa6.31□□□□□ -1.4
ATG4A-202ENST00000345734 C6orf226Q5I0X4 101 aa6.31□□□□□ -1.4
ATG4A-202ENST00000345734 C5orf38Q86SI9 138 aa6.31□□□□□ -1.4
ATG4A-202ENST00000345734 NTN5Q8WTR8 489 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-202ENST00000345734 XCL1P47992 114 aa6.31□□□□□ -1.4
ATG4A-202ENST00000345734 KPRPQ5T749 579 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-202ENST00000345734 LELP1Q5T871 98 aa6.31□□□□□ -1.4
ATG4A-202ENST00000345734 LINC00269Q8N2A0 174 aa6.31□□□□□ -1.4
ATG4A-202ENST00000345734 ZNF625Q96I27 306 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-202ENST00000345734 CFC1BP0CG36 223 aa6.3□□□□□ -1.4
ATG4A-202ENST00000345734 CFC1P0CG37 223 aa6.3□□□□□ -1.4
ATG4A-202ENST00000345734 LYPD5Q6UWN5 251 aa6.3□□□□□ -1.4
ATG4A-202ENST00000345734 DAND5Q8N907 189 aa6.3□□□□□ -1.4
ATG4A-202ENST00000345734 KLK5Q9Y337 293 aaPredicted RBP6.3□□□□□ -1.4
ATG4A-202ENST00000345734 TRBV10-2A0A0K0K1G8 114 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 NDUFC2-KCTD14E9PQ53 114 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 H3BT86 120 aa6.29□□□□□ -1.4
ATG4A-202ENST00000345734 ANGP03950 147 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms