RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.15□□□□□ -0.79
CXCL12-201ENST00000343575 IGHV1-58A0A0C4DH39 117 aa10.15□□□□□ -0.79
CXCL12-201ENST00000343575 A0A0J9YXV3 536 aa10.15□□□□□ -0.79
CXCL12-201ENST00000343575 IGKV2-29A2NJV5 120 aaPredicted RBP10.15□□□□□ -0.79
CXCL12-201ENST00000343575 H3BNG1 76 aa10.15□□□□□ -0.79
CXCL12-201ENST00000343575 ACYP1P07311 99 aa10.15□□□□□ -0.79
CXCL12-201ENST00000343575 MIAQ16674 131 aa10.15□□□□□ -0.79
CXCL12-201ENST00000343575 LITAFQ99732 161 aa10.15□□□□□ -0.79
CXCL12-201ENST00000343575 TRBV6-8A0A0A6YYG3 113 aa10.14□□□□□ -0.79
CXCL12-201ENST00000343575 TEX49A0A1B0GTD5 131 aa10.13□□□□□ -0.79
CXCL12-201ENST00000343575 TINCRA0A1B0GVN0 87 aa10.13□□□□□ -0.79
CXCL12-201ENST00000343575 H7C423 109 aa10.13□□□□□ -0.79
CXCL12-201ENST00000343575 CEMP1Q6PRD7 247 aaPredicted RBP10.13□□□□□ -0.79
CXCL12-201ENST00000343575 OPRPNQ99935 248 aaPredicted RBP10.13□□□□□ -0.79
CXCL12-201ENST00000343575 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
CXCL12-201ENST00000343575 LST1O00453 97 aa10.13□□□□□ -0.79
CXCL12-201ENST00000343575 COPS9Q8WXC6 57 aa10.13□□□□□ -0.79
CXCL12-201ENST00000343575 IMUPQ9GZP8 106 aa10.13□□□□□ -0.79
CXCL12-201ENST00000343575 TRBV7-7A0A0K0K1E9 115 aa10.12□□□□□ -0.79
CXCL12-201ENST00000343575 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
CXCL12-201ENST00000343575 UBE2D4Q9Y2X8 147 aa10.12□□□□□ -0.79
CXCL12-201ENST00000343575 PRSS2P07478 247 aa10.11□□□□□ -0.79
CXCL12-201ENST00000343575 TMEM243Q9BU79 118 aa10.1□□□□□ -0.79
CXCL12-201ENST00000343575 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
CXCL12-201ENST00000343575 LYPD5Q6UWN5 251 aa10.09□□□□□ -0.79
CXCL12-201ENST00000343575 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
CXCL12-201ENST00000343575 CCDC179H3BU77 68 aa10.08□□□□□ -0.8
CXCL12-201ENST00000343575 TMEM101Q96IK0 257 aa10.08□□□□□ -0.8
CXCL12-201ENST00000343575 CIRBPQ14011 172 aaKnown RBP10.08□□□□□ -0.8
CXCL12-201ENST00000343575 TIRAPP58753 221 aa10.06□□□□□ -0.8
CXCL12-201ENST00000343575 ESRGQ1W209 222 aa10.06□□□□□ -0.8
CXCL12-201ENST00000343575 RNASE13Q5GAN3 156 aaKnown RBP10.06□□□□□ -0.8
CXCL12-201ENST00000343575 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
CXCL12-201ENST00000343575 PPDPFQ9H3Y8 114 aa10.06□□□□□ -0.8
CXCL12-201ENST00000343575 CSDC2Q9Y534 153 aaKnown RBP10.06□□□□□ -0.8
CXCL12-201ENST00000343575 NDUFA1O15239 70 aa10.05□□□□□ -0.8
CXCL12-201ENST00000343575 ADAMTSL4-AS1Q5T5F5 129 aa10.05□□□□□ -0.8
CXCL12-201ENST00000343575 LELP1Q5T871 98 aa10.05□□□□□ -0.8
CXCL12-201ENST00000343575 Q8N3U1 123 aa10.05□□□□□ -0.8
CXCL12-201ENST00000343575 CSMD3Q7Z407 3707 aa10.05□□□□□ -0.8
CXCL12-201ENST00000343575 IGLV4-60A0A075B6I1 120 aa10.04□□□□□ -0.8
CXCL12-201ENST00000343575 MEIG1Q5JSS6 88 aa10.04□□□□□ -0.8
CXCL12-201ENST00000343575 CDC42SE2Q9NRR3 84 aa10.04□□□□□ -0.8
CXCL12-201ENST00000343575 IGLV5-45A0A087WSX0 123 aa10.03□□□□□ -0.8
CXCL12-201ENST00000343575 UBE2L6O14933 153 aa10.03□□□□□ -0.8
CXCL12-201ENST00000343575 TRAV8-3A0A0A6YYJ7 113 aa10.02□□□□□ -0.8
CXCL12-201ENST00000343575 COX7A2LO14548 114 aa10.02□□□□□ -0.81
CXCL12-201ENST00000343575 LINC00643Q86TS7 51 aa10.02□□□□□ -0.81
CXCL12-201ENST00000343575 CLEC2BQ92478 149 aa10.02□□□□□ -0.81
CXCL12-201ENST00000343575 A0A1B0GUV1 79 aa10.01□□□□□ -0.81
CXCL12-201ENST00000343575 TRACP01848 142 aa10.01□□□□□ -0.81
CXCL12-201ENST00000343575 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
CXCL12-201ENST00000343575 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
CXCL12-201ENST00000343575 DYNC2H1Q8NCM8 4307 aaKnown RBP10.01□□□□□ -0.81
CXCL12-201ENST00000343575 WFDC10BQ8IUB3 73 aa10□□□□□ -0.81
CXCL12-201ENST00000343575 TGP01266 2768 aa10□□□□□ -0.81
CXCL12-201ENST00000343575 CXCL5P42830 114 aa10□□□□□ -0.81
CXCL12-201ENST00000343575 APLNQ9ULZ1 77 aa10□□□□□ -0.81
CXCL12-201ENST00000343575 LINC00588Q9Y4M8 146 aa9.99□□□□□ -0.81
CXCL12-201ENST00000343575 STARD9Q9P2P6 4700 aa9.99□□□□□ -0.81
CXCL12-201ENST00000343575 HERVK_113P63121 156 aa9.98□□□□□ -0.81
CXCL12-201ENST00000343575 SMIM20Q8N5G0 67 aa9.98□□□□□ -0.81
CXCL12-201ENST00000343575 IGLV5-39A0A0G2JS06 123 aa9.98□□□□□ -0.81
CXCL12-201ENST00000343575 INAFM2P0DMQ5 153 aa9.98□□□□□ -0.81
CXCL12-201ENST00000343575 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
CXCL12-201ENST00000343575 DAND5Q8N907 189 aa9.98□□□□□ -0.81
CXCL12-201ENST00000343575 LINC00308Q8TCZ7 52 aa9.98□□□□□ -0.81
CXCL12-201ENST00000343575 CFAP161Q6P656 301 aa9.97□□□□□ -0.81
CXCL12-201ENST00000343575 SDIM1Q6ZPB5 146 aa9.97□□□□□ -0.81
CXCL12-201ENST00000343575 HERV-K104P63124 156 aa9.96□□□□□ -0.82
CXCL12-201ENST00000343575 PLECQ15149 4684 aaKnown RBP9.95□□□□□ -0.82
CXCL12-201ENST00000343575 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
CXCL12-201ENST00000343575 NUPR2A6NF83 97 aa9.95□□□□□ -0.82
CXCL12-201ENST00000343575 LINC00242Q5T6M2 205 aa9.95□□□□□ -0.82
CXCL12-201ENST00000343575 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
CXCL12-201ENST00000343575 UQCRQO14949 82 aa9.94□□□□□ -0.82
CXCL12-201ENST00000343575 COX6A2Q02221 97 aa9.94□□□□□ -0.82
CXCL12-201ENST00000343575 LINC00269Q8N2A0 174 aa9.94□□□□□ -0.82
CXCL12-201ENST00000343575 C3orf22Q8N5N4 141 aa9.94□□□□□ -0.82
CXCL12-201ENST00000343575 FAM236AA0A1B0GUQ0 79 aa9.93□□□□□ -0.82
CXCL12-201ENST00000343575 FAM236BA0A1B0GV22 79 aa9.93□□□□□ -0.82
CXCL12-201ENST00000343575 NPC2P61916 151 aa9.93□□□□□ -0.82
CXCL12-201ENST00000343575 LYSTQ99698 3801 aa9.93□□□□□ -0.82
CXCL12-201ENST00000343575 ANGP03950 147 aaKnown RBP9.93□□□□□ -0.82
CXCL12-201ENST00000343575 CLPSL2Q6UWE3 100 aa9.93□□□□□ -0.82
CXCL12-201ENST00000343575 IGKV3OR2-268A0A0C4DH90 116 aa9.92□□□□□ -0.82
CXCL12-201ENST00000343575 LINC00959A0A1B0GUT2 108 aa9.92□□□□□ -0.82
CXCL12-201ENST00000343575 CCL18P55774 89 aa9.92□□□□□ -0.82
CXCL12-201ENST00000343575 Q9H8V8 135 aa9.92□□□□□ -0.82
CXCL12-201ENST00000343575 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
CXCL12-201ENST00000343575 TENM2Q9NT68 2774 aa9.92□□□□□ -0.82
CXCL12-201ENST00000343575 LINC01556Q5JQF7 62 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 KLK12Q9UKR0 248 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 TRAV13-2A0A0B4J235 113 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 BAALC-AS2P0C853 105 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 DNAH10OSP0CZ25 163 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 REG3AQ06141 175 aa9.91□□□□□ -0.82
CXCL12-201ENST00000343575 ENHOQ6UWT2 76 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms