RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 HNRNPA3P51991 378 aaKnown RBP11.37□□□□□ -0.59
USF2-202ENST00000343550 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
USF2-202ENST00000343550 BAGE3Q86Y29 109 aa11.36□□□□□ -0.59
USF2-202ENST00000343550 STPG4Q8N801 248 aa11.36□□□□□ -0.59
USF2-202ENST00000343550 IGLV5-45A0A087WSX0 123 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 ATP5LO75964 103 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 NDUFA6P56556 154 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 GAGE2BQ13066 116 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 C2orf82Q6UX34 121 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 FAT3Q8TDW7 4589 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 PACRGQ96M98 296 aaPredicted RBP11.35□□□□□ -0.59
USF2-202ENST00000343550 TOMM7Q9P0U1 55 aa11.35□□□□□ -0.59
USF2-202ENST00000343550 PRSS2P07478 247 aa11.34□□□□□ -0.59
USF2-202ENST00000343550 Q8IZM0 81 aa11.34□□□□□ -0.59
USF2-202ENST00000343550 SMIM1B2RUZ4 78 aa11.32□□□□□ -0.6
USF2-202ENST00000343550 IGLC3P0DOY3 106 aa11.32□□□□□ -0.6
USF2-202ENST00000343550 FAM19A2Q8N3H0 131 aa11.32□□□□□ -0.6
USF2-202ENST00000343550 TRBV30A0A0K0K1B3 111 aa11.31□□□□□ -0.6
USF2-202ENST00000343550 HSBP1O75506 76 aa11.31□□□□□ -0.6
USF2-202ENST00000343550 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
USF2-202ENST00000343550 RPL18AQ02543 176 aaKnown RBP11.31□□□□□ -0.6
USF2-202ENST00000343550 TMA7Q9Y2S6 64 aaKnown RBP11.31□□□□□ -0.6
USF2-202ENST00000343550 LINC00310P59036 64 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 CKS1BP61024 79 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 HMCN2Q8NDA2 5059 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 SERF1AO75920 110 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 Q6ZRP5 223 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 IFI27L1Q96BM0 104 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 PLA2G2DQ9UNK4 145 aa11.3□□□□□ -0.6
USF2-202ENST00000343550 A0A1W2PNN7 141 aa11.29□□□□□ -0.6
USF2-202ENST00000343550 SPINK8P0C7L1 97 aa11.29□□□□□ -0.6
USF2-202ENST00000343550 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
USF2-202ENST00000343550 H3BRM9 83 aa11.28□□□□□ -0.6
USF2-202ENST00000343550 NUPR1O60356 82 aa11.28□□□□□ -0.6
USF2-202ENST00000343550 ZNF22P17026 224 aaPredicted RBP11.27□□□□□ -0.61
USF2-202ENST00000343550 COX7B2Q8TF08 81 aa11.27□□□□□ -0.61
USF2-202ENST00000343550 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
USF2-202ENST00000343550 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 C11orf86A6NJI1 115 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 F8VRH5 84 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 GAGE2EQ4V326 116 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 GAGE2DQ9UEU5 116 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 CXCL5P42830 114 aa11.25□□□□□ -0.61
USF2-202ENST00000343550 IGLV5-39A0A0G2JS06 123 aa11.24□□□□□ -0.61
USF2-202ENST00000343550 MT1HL1P0DM35 61 aa11.24□□□□□ -0.61
USF2-202ENST00000343550 LEPROTL1O95214 131 aa11.23□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BKO60814 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BJP06899 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BOP23527 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BBP33778 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BDP58876 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BCP62807 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST2H2BEQ16778 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.22□□□□□ -0.61
USF2-202ENST00000343550 TMEM170BQ5T4T1 132 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BHQ93079 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BNQ99877 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 HIST1H2BMQ99879 126 aa11.22□□□□□ -0.61
USF2-202ENST00000343550 FAM168BA1KXE4 195 aa11.2□□□□□ -0.62
USF2-202ENST00000343550 C9orf129Q5T035 196 aaKnown RBP11.19□□□□□ -0.62
USF2-202ENST00000343550 UBR4Q5T4S7 5183 aa11.19□□□□□ -0.62
USF2-202ENST00000343550 FABP4P15090 132 aa11.19□□□□□ -0.62
USF2-202ENST00000343550 KRTAP7-1Q8IUC3 87 aa11.19□□□□□ -0.62
USF2-202ENST00000343550 HSPB8Q9UJY1 196 aa11.19□□□□□ -0.62
USF2-202ENST00000343550 H0Y8G0 127 aa11.17□□□□□ -0.62
USF2-202ENST00000343550 ODF1Q14990 250 aa11.17□□□□□ -0.62
USF2-202ENST00000343550 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
USF2-202ENST00000343550 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
USF2-202ENST00000343550 PRR3P79522 188 aaKnown RBP11.16□□□□□ -0.62
USF2-202ENST00000343550 FAM19A5Q7Z5A7 132 aaPredicted RBP11.15□□□□□ -0.62
USF2-202ENST00000343550 XAGE1AQ9HD64 81 aa11.15□□□□□ -0.62
USF2-202ENST00000343550 LOC105371267A0A1B0GV96 52 aa11.14□□□□□ -0.63
USF2-202ENST00000343550 ZNF625Q96I27 306 aaPredicted RBP11.11□□□□□ -0.63
USF2-202ENST00000343550 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
USF2-202ENST00000343550 PSORS1C2Q9UIG4 136 aa11.11□□□□□ -0.63
USF2-202ENST00000343550 M0QXV9 152 aa11.1□□□□□ -0.63
USF2-202ENST00000343550 PFN2P35080 140 aa11.1□□□□□ -0.63
USF2-202ENST00000343550 SFTA2Q6UW10 78 aa11.1□□□□□ -0.63
USF2-202ENST00000343550 KRTAP11-1Q8IUC1 163 aa11.1□□□□□ -0.63
USF2-202ENST00000343550 PLNP26678 52 aa11.09□□□□□ -0.63
USF2-202ENST00000343550 COA6Q5JTJ3 125 aaKnown RBP11.09□□□□□ -0.63
USF2-202ENST00000343550 LINC01600Q96MT4 127 aa11.09□□□□□ -0.63
USF2-202ENST00000343550 COX17Q14061 63 aa11.09□□□□□ -0.63
USF2-202ENST00000343550 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
USF2-202ENST00000343550 ERG28Q9UKR5 140 aa11.09□□□□□ -0.63
USF2-202ENST00000343550 C22orf24Q9Y442 160 aa11.09□□□□□ -0.63
USF2-202ENST00000343550 DPM2O94777 84 aa11.08□□□□□ -0.64
USF2-202ENST00000343550 SRSF9Q13242 221 aaKnown RBP eCLIP11.08□□□□□ -0.64
USF2-202ENST00000343550 IGKCP01834 107 aa11.06□□□□□ -0.64
USF2-202ENST00000343550 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
USF2-202ENST00000343550 C1orf137Q5JT78 98 aa11.05□□□□□ -0.64
USF2-202ENST00000343550 SPINK6Q6UWN8 80 aa11.05□□□□□ -0.64
USF2-202ENST00000343550 TNXBP22105 4242 aa11.05□□□□□ -0.64
USF2-202ENST00000343550 UBE2BP63146 152 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms