RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ZNF575Q86XF7 245 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 LINC00482Q8N8I6 264 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 A8MTW9 85 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 TIRAPP58753 221 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 DEFB114Q30KQ6 69 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 DSCR8Q96T75 97 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 COL6A5A8TX70 2615 aa7.55□□□□□ -1.2
CAPRIN1-201ENST00000341394 GHRHP01286 108 aa7.54□□□□□ -1.2
CAPRIN1-201ENST00000341394 HIGD2BQ4VC39 106 aa7.54□□□□□ -1.2
CAPRIN1-201ENST00000341394 C9orf116Q5BN46 136 aaPredicted RBP7.54□□□□□ -1.2
CAPRIN1-201ENST00000341394 COX7A2LO14548 114 aa7.54□□□□□ -1.2
CAPRIN1-201ENST00000341394 SNURFQ9Y675 71 aa7.54□□□□□ -1.2
CAPRIN1-201ENST00000341394 A0A0U1RQV1 116 aa7.54□□□□□ -1.2
CAPRIN1-201ENST00000341394 UBE2D3P61077 147 aa7.53□□□□□ -1.2
CAPRIN1-201ENST00000341394 UBE2D2P62837 147 aa7.53□□□□□ -1.2
CAPRIN1-201ENST00000341394 FHL3Q13643 280 aa7.53□□□□□ -1.2
CAPRIN1-201ENST00000341394 KLLNB2CW77 178 aa7.53□□□□□ -1.2
CAPRIN1-201ENST00000341394 MPLKIPQ8TAP9 179 aa7.52□□□□□ -1.21
CAPRIN1-201ENST00000341394 M0QXV9 152 aa7.52□□□□□ -1.21
CAPRIN1-201ENST00000341394 PRR4Q16378 134 aa7.52□□□□□ -1.21
CAPRIN1-201ENST00000341394 PRO0461Q9UI25 63 aa7.52□□□□□ -1.21
CAPRIN1-201ENST00000341394 ANK2Q01484 3957 aa7.52□□□□□ -1.21
CAPRIN1-201ENST00000341394 STAB1Q9NY15 2570 aa7.52□□□□□ -1.21
CAPRIN1-201ENST00000341394 TRBV30A0A0K0K1B3 111 aa7.52□□□□□ -1.21
CAPRIN1-201ENST00000341394 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
CAPRIN1-201ENST00000341394 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
CAPRIN1-201ENST00000341394 LST1O00453 97 aa7.51□□□□□ -1.21
CAPRIN1-201ENST00000341394 PKIGQ9Y2B9 76 aa7.51□□□□□ -1.21
CAPRIN1-201ENST00000341394 IGKV2D-24A0A075B6R9 120 aa7.51□□□□□ -1.21
CAPRIN1-201ENST00000341394 CXCL5P42830 114 aa7.51□□□□□ -1.21
CAPRIN1-201ENST00000341394 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
CAPRIN1-201ENST00000341394 A0A096LNI7 61 aa7.5□□□□□ -1.21
CAPRIN1-201ENST00000341394 PPDPFQ9H3Y8 114 aa7.5□□□□□ -1.21
CAPRIN1-201ENST00000341394 LRCOL1A6NCL2 159 aa7.5□□□□□ -1.21
CAPRIN1-201ENST00000341394 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
CAPRIN1-201ENST00000341394 SMIM11BQ8TCY0 68 aa7.5□□□□□ -1.21
CAPRIN1-201ENST00000341394 MED14OSP0DP75 135 aa7.5□□□□□ -1.21
CAPRIN1-201ENST00000341394 LINC00242Q5T6M2 205 aa7.5□□□□□ -1.21
CAPRIN1-201ENST00000341394 KRTAP10-3P60369 221 aa7.49□□□□□ -1.21
CAPRIN1-201ENST00000341394 ATOX1O00244 68 aa7.48□□□□□ -1.21
CAPRIN1-201ENST00000341394 A0A087WYN8 130 aa7.48□□□□□ -1.21
CAPRIN1-201ENST00000341394 J3KT08 172 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 CMC4P56277 68 aaPredicted RBP7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 IGLV4-60A0A075B6I1 120 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 HRCT1Q6UXD1 115 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 C9orf85Q96MD7 179 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 OVOL2Q9BRP0 275 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 SPANXCQ9NY87 97 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 SPAG11BQ08648 103 aa7.47□□□□□ -1.21
CAPRIN1-201ENST00000341394 ACYP1P07311 99 aa7.46□□□□□ -1.21
CAPRIN1-201ENST00000341394 SPATA3Q8NHX4 192 aa7.46□□□□□ -1.21
CAPRIN1-201ENST00000341394 CAMK2N2Q96S95 79 aa7.46□□□□□ -1.21
CAPRIN1-201ENST00000341394 UPK3BQ9BT76 320 aa7.46□□□□□ -1.21
CAPRIN1-201ENST00000341394 NKAPP1Q8N9T2 125 aa7.46□□□□□ -1.21
CAPRIN1-201ENST00000341394 CMYA5Q8N3K9 4069 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 C3orf84H3BNL1 204 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 C3orf22Q8N5N4 141 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 BRK1Q8WUW1 75 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 ODF3Q96PU9 254 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 USP17L23D6RBM5 183 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 NDUFA1O15239 70 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 CCL18P55774 89 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 C9orf66Q5T8R8 295 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 FAM110AQ9BQ89 295 aa7.46□□□□□ -1.22
CAPRIN1-201ENST00000341394 H0YGX0 51 aa7.45□□□□□ -1.22
CAPRIN1-201ENST00000341394 FAM222AQ5U5X8 452 aa7.45□□□□□ -1.22
CAPRIN1-201ENST00000341394 LINC00315P59091 139 aa7.45□□□□□ -1.22
CAPRIN1-201ENST00000341394 MRPS36P82909 103 aaKnown RBP7.45□□□□□ -1.22
CAPRIN1-201ENST00000341394 ODF3L2Q3SX64 289 aa7.45□□□□□ -1.22
CAPRIN1-201ENST00000341394 UQCRQO14949 82 aa7.45□□□□□ -1.22
CAPRIN1-201ENST00000341394 KRTAP24-1Q3LI83 254 aa7.45□□□□□ -1.22
CAPRIN1-201ENST00000341394 TRBV10-1A0A0K0K1A3 114 aa7.44□□□□□ -1.22
CAPRIN1-201ENST00000341394 IGLV1-51P01701 117 aa7.44□□□□□ -1.22
CAPRIN1-201ENST00000341394 C5orf47Q569G3 176 aa7.44□□□□□ -1.22
CAPRIN1-201ENST00000341394 KIF25-AS1Q9Y6Z4 181 aa7.44□□□□□ -1.22
CAPRIN1-201ENST00000341394 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
CAPRIN1-201ENST00000341394 FAM19A1Q7Z5A9 133 aa7.44□□□□□ -1.22
CAPRIN1-201ENST00000341394 SMIM1B2RUZ4 78 aa7.43□□□□□ -1.22
CAPRIN1-201ENST00000341394 COX8CQ7Z4L0 72 aa7.43□□□□□ -1.22
CAPRIN1-201ENST00000341394 Q6ZQY7 126 aa7.43□□□□□ -1.22
CAPRIN1-201ENST00000341394 IGKV2-28A0A075B6P5 120 aa7.42□□□□□ -1.22
CAPRIN1-201ENST00000341394 IGKV2D-28P01615 120 aa7.42□□□□□ -1.22
CAPRIN1-201ENST00000341394 CHCHD10Q8WYQ3 142 aaPredicted RBP7.42□□□□□ -1.22
CAPRIN1-201ENST00000341394 C16orf74Q96GX8 76 aa7.42□□□□□ -1.22
CAPRIN1-201ENST00000341394 UBE2BP63146 152 aa7.42□□□□□ -1.22
CAPRIN1-201ENST00000341394 FAM218AQ96MZ4 157 aa7.41□□□□□ -1.22
CAPRIN1-201ENST00000341394 PSCAO43653 123 aa7.41□□□□□ -1.22
CAPRIN1-201ENST00000341394 NREPQ16612 68 aa7.41□□□□□ -1.22
CAPRIN1-201ENST00000341394 LINC00337Q8N6G1 96 aa7.41□□□□□ -1.22
CAPRIN1-201ENST00000341394 FAM19A4Q96LR4 140 aa7.41□□□□□ -1.22
CAPRIN1-201ENST00000341394 LINC00846Q9NV44 126 aa7.41□□□□□ -1.22
CAPRIN1-201ENST00000341394 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.22
CAPRIN1-201ENST00000341394 REG3AQ06141 175 aa7.4□□□□□ -1.22
CAPRIN1-201ENST00000341394 CDC42SE2Q9NRR3 84 aa7.4□□□□□ -1.22
CAPRIN1-201ENST00000341394 SOSTDC1Q6X4U4 206 aa7.4□□□□□ -1.22
CAPRIN1-201ENST00000341394 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.23
CAPRIN1-201ENST00000341394 KIR2DL5BQ8NHK3 375 aa7.4□□□□□ -1.23
CAPRIN1-201ENST00000341394 CELA1Q9UNI1 258 aa7.4□□□□□ -1.23
CAPRIN1-201ENST00000341394 A0A0J9YWU9 116 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms