RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 LEPROTL1O95214 131 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 HBDP02042 147 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 PRSS2P07478 247 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 CHTF8P0CG12 524 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 KRTDAPP60985 99 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 RNF151Q2KHN1 245 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 Q6ZRU5 148 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
SLC28A1-202ENST00000338602 A0A087WYN8 130 aa7.21□□□□□ -1.25
SLC28A1-202ENST00000338602 PANO1I0J062 215 aa7.21□□□□□ -1.25
SLC28A1-202ENST00000338602 C3orf79P0CE67 100 aa7.21□□□□□ -1.25
SLC28A1-202ENST00000338602 MRPL35Q9NZE8 188 aaKnown RBP7.21□□□□□ -1.25
SLC28A1-202ENST00000338602 VPS13BQ7Z7G8 4022 aa7.21□□□□□ -1.25
SLC28A1-202ENST00000338602 GAGE2BQ13066 116 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 PMVKQ15126 192 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 PYY3Q5JQD4 70 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 STPG4Q8N801 248 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 HSPB8Q9UJY1 196 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 A0A096LNI7 61 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 TINCRA0A1B0GVN0 87 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 ATP5LO75964 103 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 SCGB1D1O95968 90 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 RPL37AP61513 92 aaKnown RBP7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 JOSD1Q15040 202 aaPredicted RBP7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 LINC00518Q8N0U6 118 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 LINC00469Q8N7U9 141 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 CST9LQ9H4G1 147 aa7.2□□□□□ -1.26
SLC28A1-202ENST00000338602 MYCBP2O75592 4640 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 A0A0J9YXV3 536 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 PTTG1IPP53801 180 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 CKS1BP61024 79 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 RPL18AQ02543 176 aaKnown RBP7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 C6orf226Q5I0X4 101 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 IFI27L1Q96BM0 104 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 MAP1LC3CQ9BXW4 147 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 TOMM7Q9P0U1 55 aa7.19□□□□□ -1.26
SLC28A1-202ENST00000338602 TRBV30A0A0K0K1B3 111 aa7.18□□□□□ -1.26
SLC28A1-202ENST00000338602 SYS1-DBNDD2H3BUS1 97 aa7.18□□□□□ -1.26
SLC28A1-202ENST00000338602 SMIM6P0DI80 62 aa7.18□□□□□ -1.26
SLC28A1-202ENST00000338602 UNQ6190/PRO20217Q6UXQ8 127 aa7.18□□□□□ -1.26
SLC28A1-202ENST00000338602 CDKN2A-AS1Q9UH64 79 aa7.18□□□□□ -1.26
SLC28A1-202ENST00000338602 H0Y8G0 127 aa7.17□□□□□ -1.26
SLC28A1-202ENST00000338602 H3BRM9 83 aa7.17□□□□□ -1.26
SLC28A1-202ENST00000338602 KIAA0087Q14695 138 aa7.17□□□□□ -1.26
SLC28A1-202ENST00000338602 Q8IZM0 81 aa7.17□□□□□ -1.26
SLC28A1-202ENST00000338602 C12orf57Q99622 126 aa7.17□□□□□ -1.26
SLC28A1-202ENST00000338602 PET117Q6UWS5 81 aa7.16□□□□□ -1.26
SLC28A1-202ENST00000338602 TLX1NBP0CAT3 122 aa7.15□□□□□ -1.26
SLC28A1-202ENST00000338602 CXCL5P42830 114 aa7.15□□□□□ -1.26
SLC28A1-202ENST00000338602 C10orf25Q5T742 122 aa7.15□□□□□ -1.26
SLC28A1-202ENST00000338602 C6orf48Q9UBA6 75 aa7.15□□□□□ -1.26
SLC28A1-202ENST00000338602 IGLV5-45A0A087WSX0 123 aa7.14□□□□□ -1.27
SLC28A1-202ENST00000338602 C2orf82Q6UX34 121 aa7.14□□□□□ -1.27
SLC28A1-202ENST00000338602 PMCHL2Q9BQD1 86 aa7.14□□□□□ -1.27
SLC28A1-202ENST00000338602 SMIM1B2RUZ4 78 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 F8VRH5 84 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 IGLC3P0DOY3 106 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 LINC01545Q5VT33 79 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 ATOH7Q8N100 152 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 COX7B2Q8TF08 81 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 HMCN2Q8NDA2 5059 aa7.13□□□□□ -1.27
SLC28A1-202ENST00000338602 C20orf202A1L168 122 aa7.12□□□□□ -1.27
SLC28A1-202ENST00000338602 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
SLC28A1-202ENST00000338602 GAGE2EQ4V326 116 aa7.12□□□□□ -1.27
SLC28A1-202ENST00000338602 C9orf116Q5BN46 136 aaPredicted RBP7.12□□□□□ -1.27
SLC28A1-202ENST00000338602 Q6ZRP5 223 aa7.12□□□□□ -1.27
SLC28A1-202ENST00000338602 GAGE2DQ9UEU5 116 aa7.12□□□□□ -1.27
SLC28A1-202ENST00000338602 KRTAP10-4P60372 401 aaPredicted RBP7.11□□□□□ -1.27
SLC28A1-202ENST00000338602 CHTOPQ9Y3Y2 248 aaKnown RBP7.11□□□□□ -1.27
SLC28A1-202ENST00000338602 FLG2Q5D862 2391 aaPredicted RBP7.11□□□□□ -1.27
SLC28A1-202ENST00000338602 TRAV12-1A0A0B4J245 112 aa7.1□□□□□ -1.27
SLC28A1-202ENST00000338602 A0A1W2PNN7 141 aa7.1□□□□□ -1.27
SLC28A1-202ENST00000338602 ODF1Q14990 250 aa7.1□□□□□ -1.27
SLC28A1-202ENST00000338602 J3QL48 77 aa7.09□□□□□ -1.27
SLC28A1-202ENST00000338602 ZNF22P17026 224 aaPredicted RBP7.09□□□□□ -1.27
SLC28A1-202ENST00000338602 S100A12P80511 92 aa7.09□□□□□ -1.27
SLC28A1-202ENST00000338602 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
SLC28A1-202ENST00000338602 VAMP8Q9BV40 100 aa7.08□□□□□ -1.28
SLC28A1-202ENST00000338602 C11orf86A6NJI1 115 aa7.08□□□□□ -1.28
SLC28A1-202ENST00000338602 PRR3P79522 188 aaKnown RBP7.08□□□□□ -1.28
SLC28A1-202ENST00000338602 SFTA2Q6UW10 78 aa7.08□□□□□ -1.28
SLC28A1-202ENST00000338602 PRO1933Q9H354 126 aa7.08□□□□□ -1.28
SLC28A1-202ENST00000338602 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
SLC28A1-202ENST00000338602 IGLV5-39A0A0G2JS06 123 aa7.07□□□□□ -1.28
SLC28A1-202ENST00000338602 DPM2O94777 84 aa7.07□□□□□ -1.28
SLC28A1-202ENST00000338602 OXTP01178 125 aa7.07□□□□□ -1.28
SLC28A1-202ENST00000338602 IGKCP01834 107 aa7.07□□□□□ -1.28
SLC28A1-202ENST00000338602 FAM19A5Q7Z5A7 132 aaPredicted RBP7.07□□□□□ -1.28
SLC28A1-202ENST00000338602 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
SLC28A1-202ENST00000338602 SPATA45Q537H7 98 aa7.06□□□□□ -1.28
SLC28A1-202ENST00000338602 PHF5AQ7RTV0 110 aaKnown RBP7.06□□□□□ -1.28
SLC28A1-202ENST00000338602 FAM168BA1KXE4 195 aa7.05□□□□□ -1.28
SLC28A1-202ENST00000338602 M0QXV9 152 aa7.05□□□□□ -1.28
SLC28A1-202ENST00000338602 UBE2BP63146 152 aa7.05□□□□□ -1.28
SLC28A1-202ENST00000338602 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
SLC28A1-202ENST00000338602 PLNP26678 52 aa7.04□□□□□ -1.28
SLC28A1-202ENST00000338602 LBHQ53QV2 105 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms