RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PET117Q6UWS5 81 aa13.18□□□□□ -0.3
MRPL40-201ENST00000333130 CKS1BP61024 79 aa13.17□□□□□ -0.3
MRPL40-201ENST00000333130 C6orf226Q5I0X4 101 aa13.17□□□□□ -0.3
MRPL40-201ENST00000333130 LINC01545Q5VT33 79 aa13.17□□□□□ -0.3
MRPL40-201ENST00000333130 DPH3Q96FX2 82 aa13.17□□□□□ -0.3
MRPL40-201ENST00000333130 LINC00474Q9P2X8 69 aa13.17□□□□□ -0.3
MRPL40-201ENST00000333130 LOC107984640A0A0U1RRK4 108 aa13.16□□□□□ -0.3
MRPL40-201ENST00000333130 DPM2O94777 84 aa13.16□□□□□ -0.3
MRPL40-201ENST00000333130 S100A2P29034 98 aa13.16□□□□□ -0.3
MRPL40-201ENST00000333130 RNF151Q2KHN1 245 aa13.16□□□□□ -0.3
MRPL40-201ENST00000333130 PMCHL2Q9BQD1 86 aa13.16□□□□□ -0.3
MRPL40-201ENST00000333130 HSPG2P98160 4391 aa13.16□□□□□ -0.3
MRPL40-201ENST00000333130 DNAH8Q96JB1 4490 aa13.16□□□□□ -0.3
MRPL40-201ENST00000333130 RYR1P21817 5038 aa13.15□□□□□ -0.3
MRPL40-201ENST00000333130 TMEM223A0PJW6 202 aa13.15□□□□□ -0.3
MRPL40-201ENST00000333130 HAMPP81172 84 aa13.15□□□□□ -0.3
MRPL40-201ENST00000333130 SCXQ7RTU7 201 aa13.15□□□□□ -0.3
MRPL40-201ENST00000333130 IGKCP01834 107 aa13.14□□□□□ -0.31
MRPL40-201ENST00000333130 CXCL5P42830 114 aa13.14□□□□□ -0.31
MRPL40-201ENST00000333130 KRTDAPP60985 99 aa13.14□□□□□ -0.31
MRPL40-201ENST00000333130 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
MRPL40-201ENST00000333130 IGKV2-24A0A0C4DH68 120 aa13.12□□□□□ -0.31
MRPL40-201ENST00000333130 TRBV30A0A0K0K1B3 111 aa13.12□□□□□ -0.31
MRPL40-201ENST00000333130 C10orf25Q5T742 122 aa13.12□□□□□ -0.31
MRPL40-201ENST00000333130 C2orf82Q6UX34 121 aa13.12□□□□□ -0.31
MRPL40-201ENST00000333130 Q8N1X5 172 aa13.12□□□□□ -0.31
MRPL40-201ENST00000333130 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.12□□□□□ -0.31
MRPL40-201ENST00000333130 UNQ6190/PRO20217Q6UXQ8 127 aa13.11□□□□□ -0.31
MRPL40-201ENST00000333130 CIRBP-AS1Q8TBR5 109 aa13.11□□□□□ -0.31
MRPL40-201ENST00000333130 SPACA4Q8TDM5 124 aa13.11□□□□□ -0.31
MRPL40-201ENST00000333130 RPL18AQ02543 176 aaKnown RBP13.1□□□□□ -0.31
MRPL40-201ENST00000333130 CIRBPQ14011 172 aaKnown RBP13.1□□□□□ -0.31
MRPL40-201ENST00000333130 MAJINQ3KP22 176 aa13.1□□□□□ -0.31
MRPL40-201ENST00000333130 C6orf48Q9UBA6 75 aa13.1□□□□□ -0.31
MRPL40-201ENST00000333130 A0A096LNI7 61 aa13.09□□□□□ -0.31
MRPL40-201ENST00000333130 CHTF8P0CG12 524 aa13.09□□□□□ -0.31
MRPL40-201ENST00000333130 HERC2O95714 4834 aa13.09□□□□□ -0.31
MRPL40-201ENST00000333130 FAM229AH3BQW9 127 aa13.08□□□□□ -0.31
MRPL40-201ENST00000333130 GAGE2BQ13066 116 aa13.08□□□□□ -0.31
MRPL40-201ENST00000333130 SMR3BP02814 79 aaPredicted RBP13.07□□□□□ -0.32
MRPL40-201ENST00000333130 PTTG1IPP53801 180 aa13.07□□□□□ -0.32
MRPL40-201ENST00000333130 C20orf202A1L168 122 aa13.07□□□□□ -0.32
MRPL40-201ENST00000333130 EPM2AB3EWF7 344 aa13.07□□□□□ -0.32
MRPL40-201ENST00000333130 A0A087WYN8 130 aa13.06□□□□□ -0.32
MRPL40-201ENST00000333130 PANO1I0J062 215 aa13.06□□□□□ -0.32
MRPL40-201ENST00000333130 TLX1NBP0CAT3 122 aa13.06□□□□□ -0.32
MRPL40-201ENST00000333130 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
MRPL40-201ENST00000333130 STPG4Q8N801 248 aa13.05□□□□□ -0.32
MRPL40-201ENST00000333130 AKR1D1P51857 326 aa13.04□□□□□ -0.32
MRPL40-201ENST00000333130 HERVK_113P61574 105 aa13.04□□□□□ -0.32
MRPL40-201ENST00000333130 SFTA2Q6UW10 78 aa13.04□□□□□ -0.32
MRPL40-201ENST00000333130 LINC00528Q8N1L1 170 aa13.04□□□□□ -0.32
MRPL40-201ENST00000333130 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
MRPL40-201ENST00000333130 Q5VSD8 79 aa13.03□□□□□ -0.32
MRPL40-201ENST00000333130 ZNF625Q96I27 306 aaPredicted RBP13.03□□□□□ -0.32
MRPL40-201ENST00000333130 PLAC8Q9NZF1 115 aa13.03□□□□□ -0.32
MRPL40-201ENST00000333130 LEPROTO15243 131 aa13.02□□□□□ -0.33
MRPL40-201ENST00000333130 E9PLD3 99 aa13.01□□□□□ -0.33
MRPL40-201ENST00000333130 PLA2G1BP04054 148 aaKnown RBP13.01□□□□□ -0.33
MRPL40-201ENST00000333130 TSPEAR-AS2P59090 65 aa13.01□□□□□ -0.33
MRPL40-201ENST00000333130 C9orf116Q5BN46 136 aaPredicted RBP13.01□□□□□ -0.33
MRPL40-201ENST00000333130 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
MRPL40-201ENST00000333130 GAGE2EQ4V326 116 aa12.99□□□□□ -0.33
MRPL40-201ENST00000333130 Q6ZRP5 223 aa12.99□□□□□ -0.33
MRPL40-201ENST00000333130 C7orf33Q8WU49 177 aa12.99□□□□□ -0.33
MRPL40-201ENST00000333130 GAGE2DQ9UEU5 116 aa12.99□□□□□ -0.33
MRPL40-201ENST00000333130 J3QQQ9 107 aa12.98□□□□□ -0.33
MRPL40-201ENST00000333130 ATOH7Q8N100 152 aa12.96□□□□□ -0.33
MRPL40-201ENST00000333130 NDUFA12Q9UI09 145 aa12.96□□□□□ -0.33
MRPL40-201ENST00000333130 NMUP48645 174 aa12.94□□□□□ -0.34
MRPL40-201ENST00000333130 HERV-K104P63124 156 aa12.94□□□□□ -0.34
MRPL40-201ENST00000333130 ERG28Q9UKR5 140 aa12.94□□□□□ -0.34
MRPL40-201ENST00000333130 LGALS3P17931 250 aaKnown RBP12.94□□□□□ -0.34
MRPL40-201ENST00000333130 COX17Q14061 63 aa12.94□□□□□ -0.34
MRPL40-201ENST00000333130 IGKV2D-26A0A0A0MRZ7 120 aa12.93□□□□□ -0.34
MRPL40-201ENST00000333130 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
MRPL40-201ENST00000333130 RPL37AP61513 92 aaKnown RBP12.93□□□□□ -0.34
MRPL40-201ENST00000333130 FAT1Q14517 4588 aa12.91□□□□□ -0.34
MRPL40-201ENST00000333130 SCGB1D1O95968 90 aa12.91□□□□□ -0.34
MRPL40-201ENST00000333130 ANKRD39Q53RE8 183 aa12.91□□□□□ -0.34
MRPL40-201ENST00000333130 C9orf129Q5T035 196 aaKnown RBP12.9□□□□□ -0.34
MRPL40-201ENST00000333130 KRTAP17-1Q9BYP8 105 aa12.9□□□□□ -0.34
MRPL40-201ENST00000333130 A0A1W2PNN7 141 aa12.89□□□□□ -0.35
MRPL40-201ENST00000333130 PFN2P35080 140 aa12.89□□□□□ -0.35
MRPL40-201ENST00000333130 FAM19A5Q7Z5A7 132 aaPredicted RBP12.89□□□□□ -0.35
MRPL40-201ENST00000333130 KRTAP4-5Q9BYR2 181 aa12.89□□□□□ -0.35
MRPL40-201ENST00000333130 JOSD1Q15040 202 aaPredicted RBP12.88□□□□□ -0.35
MRPL40-201ENST00000333130 XAGE1AQ9HD64 81 aa12.88□□□□□ -0.35
MRPL40-201ENST00000333130 VPS13BQ7Z7G8 4022 aa12.87□□□□□ -0.35
MRPL40-201ENST00000333130 LINC00587B1AMM8 73 aa12.87□□□□□ -0.35
MRPL40-201ENST00000333130 FAM168BA1KXE4 195 aa12.85□□□□□ -0.35
MRPL40-201ENST00000333130 SRRM2Q9UQ35 2752 aaKnown RBP12.85□□□□□ -0.35
MRPL40-201ENST00000333130 M0QXV9 152 aa12.84□□□□□ -0.35
MRPL40-201ENST00000333130 SMIM13P0DJ93 91 aa12.84□□□□□ -0.35
MRPL40-201ENST00000333130 INAFM2P0DMQ5 153 aa12.84□□□□□ -0.35
MRPL40-201ENST00000333130 MEIG1Q5JSS6 88 aa12.84□□□□□ -0.35
MRPL40-201ENST00000333130 TTTY13Q9BZ97 58 aa12.84□□□□□ -0.35
MRPL40-201ENST00000333130 A0A0J9YXY3 114 aa12.83□□□□□ -0.36
MRPL40-201ENST00000333130 HSBP1L1C9JCN9 74 aa12.83□□□□□ -0.36
MRPL40-201ENST00000333130 LINC00158P58513 81 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms