RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 DNAL4O96015 105 aa9.79□□□□□ -0.84
ATP2C1-201ENST00000328560 SPATA3Q8NHX4 192 aa9.79□□□□□ -0.84
ATP2C1-201ENST00000328560 SMIM11BQ8TCY0 68 aa9.79□□□□□ -0.84
ATP2C1-201ENST00000328560 A0A087WZ39 114 aa9.79□□□□□ -0.84
ATP2C1-201ENST00000328560 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
ATP2C1-201ENST00000328560 TRACP01848 142 aa9.78□□□□□ -0.84
ATP2C1-201ENST00000328560 SS18Q15532 418 aa9.78□□□□□ -0.84
ATP2C1-201ENST00000328560 DEFB135Q30KP9 77 aa9.78□□□□□ -0.84
ATP2C1-201ENST00000328560 VWFP04275 2813 aa9.78□□□□□ -0.84
ATP2C1-201ENST00000328560 NHLRC4P0CG21 123 aaPredicted RBP9.77□□□□□ -0.85
ATP2C1-201ENST00000328560 HTN3P15516 51 aa9.77□□□□□ -0.85
ATP2C1-201ENST00000328560 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.85
ATP2C1-201ENST00000328560 A0A087WYN8 130 aa9.77□□□□□ -0.85
ATP2C1-201ENST00000328560 Q8N3U1 123 aa9.77□□□□□ -0.85
ATP2C1-201ENST00000328560 IBA57-AS1B1ANH7 110 aa9.76□□□□□ -0.85
ATP2C1-201ENST00000328560 RPL28P46779 137 aaKnown RBP9.76□□□□□ -0.85
ATP2C1-201ENST00000328560 PRO0255Q9UI72 69 aa9.76□□□□□ -0.85
ATP2C1-201ENST00000328560 LINC00269Q8N2A0 174 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 X6R8D5 127 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 APOC4P55056 127 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 PRR3P79522 188 aaKnown RBP9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 DEFB121Q5J5C9 76 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 KIR2DL5BQ8NHK3 375 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 LECT2O14960 151 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 SLPIP03973 132 aa9.75□□□□□ -0.85
ATP2C1-201ENST00000328560 FAM240AA0A1B0GVK7 77 aa9.74□□□□□ -0.85
ATP2C1-201ENST00000328560 ANGP03950 147 aaKnown RBP9.74□□□□□ -0.85
ATP2C1-201ENST00000328560 MALP21145 153 aa9.74□□□□□ -0.85
ATP2C1-201ENST00000328560 ATRQ13535 2644 aa9.74□□□□□ -0.85
ATP2C1-201ENST00000328560 CCDC179H3BU77 68 aa9.74□□□□□ -0.85
ATP2C1-201ENST00000328560 DAD1P61803 113 aa9.74□□□□□ -0.85
ATP2C1-201ENST00000328560 SMCR5Q8TEV8 140 aa9.72□□□□□ -0.85
ATP2C1-201ENST00000328560 ANK3Q12955 4377 aaKnown RBP9.72□□□□□ -0.85
ATP2C1-201ENST00000328560 Q6Q795 121 aa9.71□□□□□ -0.85
ATP2C1-201ENST00000328560 C14orf132Q9NPU4 83 aa9.71□□□□□ -0.85
ATP2C1-201ENST00000328560 C22orf24Q9Y442 160 aa9.71□□□□□ -0.85
ATP2C1-201ENST00000328560 C9orf116Q5BN46 136 aaPredicted RBP9.71□□□□□ -0.86
ATP2C1-201ENST00000328560 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
ATP2C1-201ENST00000328560 LYRM9A8MSI8 78 aa9.7□□□□□ -0.86
ATP2C1-201ENST00000328560 ACYP1P07311 99 aa9.7□□□□□ -0.86
ATP2C1-201ENST00000328560 LINC00526Q96FQ7 95 aa9.7□□□□□ -0.86
ATP2C1-201ENST00000328560 PPDPFQ9H3Y8 114 aa9.7□□□□□ -0.86
ATP2C1-201ENST00000328560 INAFM2P0DMQ5 153 aa9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 FAM236AA0A1B0GUQ0 79 aa9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 FAM236BA0A1B0GV22 79 aa9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 C3orf56Q8N813 242 aa9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 IGHV4-28A0A0C4DH34 117 aa9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 H0YGX0 51 aa9.69□□□□□ -0.86
ATP2C1-201ENST00000328560 A0A1B0GUV1 79 aa9.68□□□□□ -0.86
ATP2C1-201ENST00000328560 LINC00612Q8N6U2 182 aa9.68□□□□□ -0.86
ATP2C1-201ENST00000328560 NCR3O14931 201 aa9.68□□□□□ -0.86
ATP2C1-201ENST00000328560 REG3AQ06141 175 aa9.68□□□□□ -0.86
ATP2C1-201ENST00000328560 Q8IZM0 81 aa9.67□□□□□ -0.86
ATP2C1-201ENST00000328560 TENM1Q9UKZ4 2725 aa9.67□□□□□ -0.86
ATP2C1-201ENST00000328560 CELA1Q9UNI1 258 aa9.67□□□□□ -0.86
ATP2C1-201ENST00000328560 LINC00643Q86TS7 51 aa9.66□□□□□ -0.86
ATP2C1-201ENST00000328560 SPART-AS1P0CW21 52 aa9.65□□□□□ -0.86
ATP2C1-201ENST00000328560 CD164L2Q6UWJ8 174 aa9.65□□□□□ -0.87
ATP2C1-201ENST00000328560 OTOGQ6ZRI0 2925 aa9.64□□□□□ -0.87
ATP2C1-201ENST00000328560 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
ATP2C1-201ENST00000328560 C6orf223Q8N319 242 aa9.63□□□□□ -0.87
ATP2C1-201ENST00000328560 KLK12Q9UKR0 248 aa9.63□□□□□ -0.87
ATP2C1-201ENST00000328560 IGKV3D-7A0A0C4DH55 119 aa9.62□□□□□ -0.87
ATP2C1-201ENST00000328560 MIFP14174 115 aa9.62□□□□□ -0.87
ATP2C1-201ENST00000328560 KIAA0087Q14695 138 aa9.62□□□□□ -0.87
ATP2C1-201ENST00000328560 ORMDL1Q9P0S3 153 aa9.62□□□□□ -0.87
ATP2C1-201ENST00000328560 SDIM1Q6ZPB5 146 aa9.61□□□□□ -0.87
ATP2C1-201ENST00000328560 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
ATP2C1-201ENST00000328560 UNQ6190/PRO20217Q6UXQ8 127 aa9.61□□□□□ -0.87
ATP2C1-201ENST00000328560 C5orf47Q569G3 176 aa9.61□□□□□ -0.87
ATP2C1-201ENST00000328560 C10orf25Q5T742 122 aa9.6□□□□□ -0.87
ATP2C1-201ENST00000328560 IGHV4-30-4P0DP06 118 aa9.6□□□□□ -0.87
ATP2C1-201ENST00000328560 SPAG11BQ08648 103 aa9.59□□□□□ -0.87
ATP2C1-201ENST00000328560 NSD1Q96L73 2696 aaPredicted RBP9.59□□□□□ -0.87
ATP2C1-201ENST00000328560 C6orf99Q4VX62 202 aa9.59□□□□□ -0.87
ATP2C1-201ENST00000328560 TMEM126AQ9H061 195 aa9.58□□□□□ -0.88
ATP2C1-201ENST00000328560 LINC00846Q9NV44 126 aa9.58□□□□□ -0.88
ATP2C1-201ENST00000328560 TEP1Q99973 2627 aaKnown RBP9.58□□□□□ -0.88
ATP2C1-201ENST00000328560 NANOS2P60321 138 aaKnown RBP9.58□□□□□ -0.88
ATP2C1-201ENST00000328560 Q8NDZ9 215 aa9.58□□□□□ -0.88
ATP2C1-201ENST00000328560 Q8NAQ8 132 aa9.57□□□□□ -0.88
ATP2C1-201ENST00000328560 IMUPQ9GZP8 106 aa9.57□□□□□ -0.88
ATP2C1-201ENST00000328560 KMT2BQ9UMN6 2715 aaPredicted RBP9.57□□□□□ -0.88
ATP2C1-201ENST00000328560 KLK5Q9Y337 293 aaPredicted RBP9.57□□□□□ -0.88
ATP2C1-201ENST00000328560 CXCL5P42830 114 aa9.57□□□□□ -0.88
ATP2C1-201ENST00000328560 FLNBO75369 2602 aaKnown RBP9.56□□□□□ -0.88
ATP2C1-201ENST00000328560 F8P00451 2351 aa9.56□□□□□ -0.88
ATP2C1-201ENST00000328560 CYSRT1A8MQ03 144 aa9.55□□□□□ -0.88
ATP2C1-201ENST00000328560 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
ATP2C1-201ENST00000328560 Q8N814 137 aa9.55□□□□□ -0.88
ATP2C1-201ENST00000328560 OXLD1Q5BKU9 147 aa9.55□□□□□ -0.88
ATP2C1-201ENST00000328560 HIVEP1P15822 2718 aa9.54□□□□□ -0.88
ATP2C1-201ENST00000328560 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
ATP2C1-201ENST00000328560 TRRAPQ9Y4A5 3859 aa9.54□□□□□ -0.88
ATP2C1-201ENST00000328560 COX17Q14061 63 aa9.54□□□□□ -0.88
ATP2C1-201ENST00000328560 LELP1Q5T871 98 aa9.54□□□□□ -0.88
ATP2C1-201ENST00000328560 LINC01561Q8N1V8 128 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms