RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 Q8NAQ8 132 aa15.42■□□□□ 0.06
PNKP-201ENST00000322344 CD164L2Q6UWJ8 174 aa15.41■□□□□ 0.06
PNKP-201ENST00000322344 SNCGO76070 127 aa15.41■□□□□ 0.06
PNKP-201ENST00000322344 CLPSL2Q6UWE3 100 aa15.41■□□□□ 0.06
PNKP-201ENST00000322344 WFDC9Q8NEX5 89 aa15.41■□□□□ 0.06
PNKP-201ENST00000322344 MRPL23Q16540 153 aaKnown RBP15.4■□□□□ 0.06
PNKP-201ENST00000322344 CKS1BP61024 79 aa15.39■□□□□ 0.05
PNKP-201ENST00000322344 LINC00269Q8N2A0 174 aa15.39■□□□□ 0.05
PNKP-201ENST00000322344 WIPF1O43516 503 aa15.39■□□□□ 0.05
PNKP-201ENST00000322344 SPART-AS1P0CW21 52 aa15.39■□□□□ 0.05
PNKP-201ENST00000322344 FAM218AQ96MZ4 157 aa15.39■□□□□ 0.05
PNKP-201ENST00000322344 CXCL5P42830 114 aa15.38■□□□□ 0.05
PNKP-201ENST00000322344 H0YGX0 51 aa15.38■□□□□ 0.05
PNKP-201ENST00000322344 BAALC-AS2P0C853 105 aa15.38■□□□□ 0.05
PNKP-201ENST00000322344 SMIM11BQ8TCY0 68 aa15.38■□□□□ 0.05
PNKP-201ENST00000322344 C11orf68Q9H3H3 251 aaKnown RBP15.38■□□□□ 0.05
PNKP-201ENST00000322344 CELA1Q9UNI1 258 aa15.37■□□□□ 0.05
PNKP-201ENST00000322344 CHCHD10Q8WYQ3 142 aaPredicted RBP15.36■□□□□ 0.05
PNKP-201ENST00000322344 ANGP03950 147 aaKnown RBP15.36■□□□□ 0.05
PNKP-201ENST00000322344 REG3AQ06141 175 aa15.36■□□□□ 0.05
PNKP-201ENST00000322344 ACYP1P07311 99 aa15.35■□□□□ 0.05
PNKP-201ENST00000322344 CFAP161Q6P656 301 aa15.35■□□□□ 0.05
PNKP-201ENST00000322344 C15orf53Q8NAA6 179 aa15.34■□□□□ 0.05
PNKP-201ENST00000322344 COX17Q14061 63 aa15.34■□□□□ 0.05
PNKP-201ENST00000322344 IGHV4-30-4P0DP06 118 aa15.33■□□□□ 0.04
PNKP-201ENST00000322344 KIAA0087Q14695 138 aa15.33■□□□□ 0.04
PNKP-201ENST00000322344 Q6Q795 121 aa15.33■□□□□ 0.04
PNKP-201ENST00000322344 GAGE2BQ13066 116 aa15.33■□□□□ 0.04
PNKP-201ENST00000322344 GAGE2EQ4V326 116 aa15.33■□□□□ 0.04
PNKP-201ENST00000322344 LELP1Q5T871 98 aa15.33■□□□□ 0.04
PNKP-201ENST00000322344 GAGE2DQ9UEU5 116 aa15.33■□□□□ 0.04
PNKP-201ENST00000322344 MALP21145 153 aa15.31■□□□□ 0.04
PNKP-201ENST00000322344 DNAL4O96015 105 aa15.31■□□□□ 0.04
PNKP-201ENST00000322344 OR13C6PQ8NH95 151 aa15.3■□□□□ 0.04
PNKP-201ENST00000322344 FN1P02751 2386 aaKnown RBP15.3■□□□□ 0.04
PNKP-201ENST00000322344 INAFM2P0DMQ5 153 aa15.29■□□□□ 0.04
PNKP-201ENST00000322344 C22orf24Q9Y442 160 aa15.29■□□□□ 0.04
PNKP-201ENST00000322344 NDUFC2O95298 119 aa15.28■□□□□ 0.04
PNKP-201ENST00000322344 OTOGQ6ZRI0 2925 aa15.28■□□□□ 0.04
PNKP-201ENST00000322344 IGLV10-54A0A075B6I4 117 aa15.27■□□□□ 0.04
PNKP-201ENST00000322344 HTN3P15516 51 aa15.27■□□□□ 0.04
PNKP-201ENST00000322344 Q8N3U1 123 aa15.27■□□□□ 0.04
PNKP-201ENST00000322344 Q9HAA7 133 aa15.27■□□□□ 0.04
PNKP-201ENST00000322344 A0A087WYN8 130 aa15.26■□□□□ 0.03
PNKP-201ENST00000322344 GCN1Q92616 2671 aaKnown RBP15.25■□□□□ 0.03
PNKP-201ENST00000322344 KLK5Q9Y337 293 aaPredicted RBP15.25■□□□□ 0.03
PNKP-201ENST00000322344 HECTD1Q9ULT8 2610 aa15.25■□□□□ 0.03
PNKP-201ENST00000322344 TTC32Q5I0X7 151 aa15.24■□□□□ 0.03
PNKP-201ENST00000322344 MUC7Q8TAX7 377 aa15.24■□□□□ 0.03
PNKP-201ENST00000322344 NSD1Q96L73 2696 aaPredicted RBP15.24■□□□□ 0.03
PNKP-201ENST00000322344 PRR34Q9NV39 138 aa15.22■□□□□ 0.03
PNKP-201ENST00000322344 ANAPC13Q9BS18 74 aa15.22■□□□□ 0.03
PNKP-201ENST00000322344 VWFP04275 2813 aa15.2■□□□□ 0.02
PNKP-201ENST00000322344 LECT2O14960 151 aa15.2■□□□□ 0.02
PNKP-201ENST00000322344 A0A1B0GX51 115 aa15.19■□□□□ 0.02
PNKP-201ENST00000322344 TMEM126AQ9H061 195 aa15.19■□□□□ 0.02
PNKP-201ENST00000322344 NOTCH2Q04721 2471 aa15.19■□□□□ 0.02
PNKP-201ENST00000322344 SPAG11BQ08648 103 aa15.19■□□□□ 0.02
PNKP-201ENST00000322344 TRBV7-7A0A0K0K1E9 115 aa15.18■□□□□ 0.02
PNKP-201ENST00000322344 NDUFV3P56181 108 aaKnown RBP15.17■□□□□ 0.02
PNKP-201ENST00000322344 LYPD5Q6UWN5 251 aa15.17■□□□□ 0.02
PNKP-201ENST00000322344 KLK12Q9UKR0 248 aa15.17■□□□□ 0.02
PNKP-201ENST00000322344 H3BNG1 76 aa15.17■□□□□ 0.02
PNKP-201ENST00000322344 NANOS2P60321 138 aaKnown RBP15.16■□□□□ 0.02
PNKP-201ENST00000322344 NBEAL2Q6ZNJ1 2754 aa15.16■□□□□ 0.02
PNKP-201ENST00000322344 LINC00643Q86TS7 51 aa15.16■□□□□ 0.02
PNKP-201ENST00000322344 A0A0J9YWU9 116 aa15.15■□□□□ 0.02
PNKP-201ENST00000322344 C9orf116Q5BN46 136 aaPredicted RBP15.15■□□□□ 0.02
PNKP-201ENST00000322344 SDIM1Q6ZPB5 146 aa15.15■□□□□ 0.02
PNKP-201ENST00000322344 OBSCN-AS1Q96MR7 158 aa15.15■□□□□ 0.02
PNKP-201ENST00000322344 ENHOQ6UWT2 76 aa15.14■□□□□ 0.01
PNKP-201ENST00000322344 ORMDL1Q9P0S3 153 aa15.14■□□□□ 0.01
PNKP-201ENST00000322344 LINC00167Q96N53 147 aa15.14■□□□□ 0.01
PNKP-201ENST00000322344 IMUPQ9GZP8 106 aa15.14■□□□□ 0.01
PNKP-201ENST00000322344 PRR3P79522 188 aaKnown RBP15.13■□□□□ 0.01
PNKP-201ENST00000322344 UNQ6190/PRO20217Q6UXQ8 127 aa15.12■□□□□ 0.01
PNKP-201ENST00000322344 GAGE2AQ6NT46 116 aa15.12■□□□□ 0.01
PNKP-201ENST00000322344 GVQW2A0A096LPI5 108 aaPredicted RBP15.1■□□□□ 0.01
PNKP-201ENST00000322344 CYSRT1A8MQ03 144 aa15.1■□□□□ 0.01
PNKP-201ENST00000322344 OXLD1Q5BKU9 147 aa15.1■□□□□ 0.01
PNKP-201ENST00000322344 C10orf25Q5T742 122 aa15.1■□□□□ 0.01
PNKP-201ENST00000322344 C6orf223Q8N319 242 aa15.1■□□□□ 0.01
PNKP-201ENST00000322344 TENM1Q9UKZ4 2725 aa15.1■□□□□ 0.01
PNKP-201ENST00000322344 NHLRC4P0CG21 123 aaPredicted RBP15.1■□□□□ 0.01
PNKP-201ENST00000322344 SMCR5Q8TEV8 140 aa15.1■□□□□ 0.01
PNKP-201ENST00000322344 KRTAP10-11P60412 298 aa15.09■□□□□ 0.01
PNKP-201ENST00000322344 KPRPQ5T749 579 aaPredicted RBP15.08■□□□□ 0
PNKP-201ENST00000322344 Q8N814 137 aa15.08■□□□□ 0
PNKP-201ENST00000322344 HIVEP1P15822 2718 aa15.07■□□□□ 0
PNKP-201ENST00000322344 NCR3O14931 201 aa15.07■□□□□ 0
PNKP-201ENST00000322344 S100A7L2Q5SY68 101 aa15.07■□□□□ 0
PNKP-201ENST00000322344 SLPIP03973 132 aa15.07■□□□□ 0
PNKP-201ENST00000322344 EGFEM1PQ0D2K5 195 aa15.07■□□□□ 0
PNKP-201ENST00000322344 RETNQ9HD89 108 aa15.06■□□□□ 0
PNKP-201ENST00000322344 C14orf132Q9NPU4 83 aa15.06■□□□□ 0
PNKP-201ENST00000322344 TEP1Q99973 2627 aaKnown RBP15.06■□□□□ 0
PNKP-201ENST00000322344 C9orf129Q5T035 196 aaKnown RBP15.05■□□□□ 0
PNKP-201ENST00000322344 Q8NDZ9 215 aa15.05■□□□□ 0
PNKP-201ENST00000322344 LINC00526Q96FQ7 95 aa15.04■□□□□ -0
PNKP-201ENST00000322344 C6orf99Q4VX62 202 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 1675.5 ms