RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 Q8N3U1 123 aa12.11□□□□□ -0.47
COL9A1-201ENST00000320755 NSD1Q96L73 2696 aaPredicted RBP12.1□□□□□ -0.47
COL9A1-201ENST00000320755 IGLV10-54A0A075B6I4 117 aa12.1□□□□□ -0.47
COL9A1-201ENST00000320755 KIR2DL5BQ8NHK3 375 aa12.1□□□□□ -0.47
COL9A1-201ENST00000320755 PRO0255Q9UI72 69 aa12.09□□□□□ -0.47
COL9A1-201ENST00000320755 SMIM11BQ8TCY0 68 aa12.09□□□□□ -0.47
COL9A1-201ENST00000320755 ATP5G1P05496 136 aa12.09□□□□□ -0.47
COL9A1-201ENST00000320755 SS18Q15532 418 aa12.09□□□□□ -0.47
COL9A1-201ENST00000320755 LINC00269Q8N2A0 174 aa12.07□□□□□ -0.48
COL9A1-201ENST00000320755 HTN3P15516 51 aa12.07□□□□□ -0.48
COL9A1-201ENST00000320755 TEP1Q99973 2627 aaKnown RBP12.07□□□□□ -0.48
COL9A1-201ENST00000320755 IBA57-AS1B1ANH7 110 aa12.07□□□□□ -0.48
COL9A1-201ENST00000320755 INAFM1C9JVW0 142 aa12.07□□□□□ -0.48
COL9A1-201ENST00000320755 TRACP01848 142 aa12.07□□□□□ -0.48
COL9A1-201ENST00000320755 A0A087WYN8 130 aa12.06□□□□□ -0.48
COL9A1-201ENST00000320755 RPL28P46779 137 aaKnown RBP12.06□□□□□ -0.48
COL9A1-201ENST00000320755 PRR3P79522 188 aaKnown RBP12.05□□□□□ -0.48
COL9A1-201ENST00000320755 NDUFV3P56181 108 aaKnown RBP12.05□□□□□ -0.48
COL9A1-201ENST00000320755 DEFB121Q5J5C9 76 aa12.05□□□□□ -0.48
COL9A1-201ENST00000320755 TRRAPQ9Y4A5 3859 aa12.04□□□□□ -0.48
COL9A1-201ENST00000320755 DNAL4O96015 105 aa12.04□□□□□ -0.48
COL9A1-201ENST00000320755 ANGP03950 147 aaKnown RBP12.04□□□□□ -0.48
COL9A1-201ENST00000320755 LINC00612Q8N6U2 182 aa12.04□□□□□ -0.48
COL9A1-201ENST00000320755 KMT2BQ9UMN6 2715 aaPredicted RBP12.03□□□□□ -0.48
COL9A1-201ENST00000320755 HIVEP1P15822 2718 aa12.03□□□□□ -0.48
COL9A1-201ENST00000320755 NHLRC4P0CG21 123 aaPredicted RBP12.02□□□□□ -0.48
COL9A1-201ENST00000320755 C22orf24Q9Y442 160 aa12.02□□□□□ -0.48
COL9A1-201ENST00000320755 DAD1P61803 113 aa12.02□□□□□ -0.49
COL9A1-201ENST00000320755 IGHV4-28A0A0C4DH34 117 aa12.02□□□□□ -0.49
COL9A1-201ENST00000320755 SLPIP03973 132 aa12.02□□□□□ -0.49
COL9A1-201ENST00000320755 A0A1B0GUV1 79 aa12.01□□□□□ -0.49
COL9A1-201ENST00000320755 MALP21145 153 aa12.01□□□□□ -0.49
COL9A1-201ENST00000320755 GAGE2AQ6NT46 116 aa12.01□□□□□ -0.49
COL9A1-201ENST00000320755 LECT2O14960 151 aa12.01□□□□□ -0.49
COL9A1-201ENST00000320755 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
COL9A1-201ENST00000320755 C9orf66Q5T8R8 295 aa12.01□□□□□ -0.49
COL9A1-201ENST00000320755 FAM240AA0A1B0GVK7 77 aa12□□□□□ -0.49
COL9A1-201ENST00000320755 SMIM9A6NGZ8 99 aa12□□□□□ -0.49
COL9A1-201ENST00000320755 CELA1Q9UNI1 258 aa12□□□□□ -0.49
COL9A1-201ENST00000320755 C9orf129Q5T035 196 aaKnown RBP11.99□□□□□ -0.49
COL9A1-201ENST00000320755 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
COL9A1-201ENST00000320755 LINC00526Q96FQ7 95 aa11.99□□□□□ -0.49
COL9A1-201ENST00000320755 SMCR5Q8TEV8 140 aa11.98□□□□□ -0.49
COL9A1-201ENST00000320755 LYRM9A8MSI8 78 aa11.97□□□□□ -0.49
COL9A1-201ENST00000320755 B5MCH6 92 aa11.97□□□□□ -0.49
COL9A1-201ENST00000320755 REG3AQ06141 175 aa11.97□□□□□ -0.49
COL9A1-201ENST00000320755 CFAP161Q6P656 301 aa11.97□□□□□ -0.49
COL9A1-201ENST00000320755 Q8IZM0 81 aa11.97□□□□□ -0.49
COL9A1-201ENST00000320755 C14orf132Q9NPU4 83 aa11.96□□□□□ -0.49
COL9A1-201ENST00000320755 PPDPFQ9H3Y8 114 aa11.96□□□□□ -0.5
COL9A1-201ENST00000320755 CCDC179H3BU77 68 aa11.95□□□□□ -0.5
COL9A1-201ENST00000320755 H0YGX0 51 aa11.95□□□□□ -0.5
COL9A1-201ENST00000320755 APOC4P55056 127 aa11.95□□□□□ -0.5
COL9A1-201ENST00000320755 Q6Q795 121 aa11.95□□□□□ -0.5
COL9A1-201ENST00000320755 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
COL9A1-201ENST00000320755 ACYP1P07311 99 aa11.93□□□□□ -0.5
COL9A1-201ENST00000320755 MRPL23Q16540 153 aaKnown RBP11.93□□□□□ -0.5
COL9A1-201ENST00000320755 NCR3O14931 201 aa11.93□□□□□ -0.5
COL9A1-201ENST00000320755 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
COL9A1-201ENST00000320755 KIAA0087Q14695 138 aa11.92□□□□□ -0.5
COL9A1-201ENST00000320755 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
COL9A1-201ENST00000320755 SS18L2Q9UHA2 77 aa11.91□□□□□ -0.5
COL9A1-201ENST00000320755 KLK12Q9UKR0 248 aa11.91□□□□□ -0.5
COL9A1-201ENST00000320755 Q8NAQ8 132 aa11.9□□□□□ -0.51
COL9A1-201ENST00000320755 PKD1L1Q8TDX9 2849 aa11.89□□□□□ -0.51
COL9A1-201ENST00000320755 FAM236AA0A1B0GUQ0 79 aa11.89□□□□□ -0.51
COL9A1-201ENST00000320755 FAM236BA0A1B0GV22 79 aa11.89□□□□□ -0.51
COL9A1-201ENST00000320755 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
COL9A1-201ENST00000320755 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
COL9A1-201ENST00000320755 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
COL9A1-201ENST00000320755 LINC00643Q86TS7 51 aa11.88□□□□□ -0.51
COL9A1-201ENST00000320755 IGHV4-30-4P0DP06 118 aa11.88□□□□□ -0.51
COL9A1-201ENST00000320755 TRBV7-7A0A0K0K1E9 115 aa11.88□□□□□ -0.51
COL9A1-201ENST00000320755 FLNBO75369 2602 aaKnown RBP11.87□□□□□ -0.51
COL9A1-201ENST00000320755 C3orf56Q8N813 242 aa11.86□□□□□ -0.51
COL9A1-201ENST00000320755 Q8NDZ9 215 aa11.86□□□□□ -0.51
COL9A1-201ENST00000320755 NANOS2P60321 138 aaKnown RBP11.86□□□□□ -0.51
COL9A1-201ENST00000320755 MIFP14174 115 aa11.85□□□□□ -0.51
COL9A1-201ENST00000320755 ORMDL1Q9P0S3 153 aa11.85□□□□□ -0.51
COL9A1-201ENST00000320755 SPAG11BQ08648 103 aa11.85□□□□□ -0.51
COL9A1-201ENST00000320755 F8P00451 2351 aa11.84□□□□□ -0.51
COL9A1-201ENST00000320755 S100A7L2Q5SY68 101 aa11.84□□□□□ -0.51
COL9A1-201ENST00000320755 STAB1Q9NY15 2570 aa11.84□□□□□ -0.51
COL9A1-201ENST00000320755 C6orf99Q4VX62 202 aa11.83□□□□□ -0.52
COL9A1-201ENST00000320755 TMEM126AQ9H061 195 aa11.83□□□□□ -0.52
COL9A1-201ENST00000320755 CYSRT1A8MQ03 144 aa11.83□□□□□ -0.52
COL9A1-201ENST00000320755 CXCL5P42830 114 aa11.83□□□□□ -0.52
COL9A1-201ENST00000320755 IGKV3D-7A0A0C4DH55 119 aa11.82□□□□□ -0.52
COL9A1-201ENST00000320755 SDIM1Q6ZPB5 146 aa11.82□□□□□ -0.52
COL9A1-201ENST00000320755 LINC01561Q8N1V8 128 aa11.82□□□□□ -0.52
COL9A1-201ENST00000320755 RETNQ9HD89 108 aa11.82□□□□□ -0.52
COL9A1-201ENST00000320755 LELP1Q5T871 98 aa11.82□□□□□ -0.52
COL9A1-201ENST00000320755 COX17Q14061 63 aa11.81□□□□□ -0.52
COL9A1-201ENST00000320755 OXLD1Q5BKU9 147 aa11.81□□□□□ -0.52
COL9A1-201ENST00000320755 LINC00846Q9NV44 126 aa11.81□□□□□ -0.52
COL9A1-201ENST00000320755 Q8N814 137 aa11.8□□□□□ -0.52
COL9A1-201ENST00000320755 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
COL9A1-201ENST00000320755 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
COL9A1-201ENST00000320755 XAGE1AQ9HD64 81 aa11.79□□□□□ -0.52
COL9A1-201ENST00000320755 ENHOQ6UWT2 76 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms