RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 A0A087WSZ3 146 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 TRBV7-7A0A0K0K1E9 115 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 LELP1Q5T871 98 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 Q6JHZ5 121 aa9.07□□□□□ -0.96
USP38-201ENST00000307017 MRPS36P82909 103 aaKnown RBP9.06□□□□□ -0.96
USP38-201ENST00000307017 SMIM1B2RUZ4 78 aa9.06□□□□□ -0.96
USP38-201ENST00000307017 POLR2KP53803 58 aaKnown RBP9.06□□□□□ -0.96
USP38-201ENST00000307017 Q6ZTC4 211 aa9.06□□□□□ -0.96
USP38-201ENST00000307017 IGKV2D-30A0A075B6S6 120 aa9.05□□□□□ -0.96
USP38-201ENST00000307017 HCG22E2RYF7 251 aa9.05□□□□□ -0.96
USP38-201ENST00000307017 IGKV2-30P06310 120 aa9.05□□□□□ -0.96
USP38-201ENST00000307017 EP400Q96L91 3159 aa9.05□□□□□ -0.96
USP38-201ENST00000307017 NDUFC1O43677 76 aa9.05□□□□□ -0.96
USP38-201ENST00000307017 C11orf71Q6IPW1 123 aa9.05□□□□□ -0.96
USP38-201ENST00000307017 TRAV7A0A075B6U4 112 aa9.04□□□□□ -0.96
USP38-201ENST00000307017 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
USP38-201ENST00000307017 LINC00846Q9NV44 126 aa9.04□□□□□ -0.96
USP38-201ENST00000307017 SMIM26A0A096LP01 95 aa9.04□□□□□ -0.96
USP38-201ENST00000307017 SMIM29Q86T20 159 aa9.04□□□□□ -0.96
USP38-201ENST00000307017 PTPRQQ9UMZ3 2332 aa9.04□□□□□ -0.96
USP38-201ENST00000307017 FSTL3O95633 263 aa9.03□□□□□ -0.96
USP38-201ENST00000307017 KLLNB2CW77 178 aa9.03□□□□□ -0.96
USP38-201ENST00000307017 ATP5EP56381 51 aaPredicted RBP9.02□□□□□ -0.97
USP38-201ENST00000307017 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
USP38-201ENST00000307017 SPG11Q96JI7 2443 aa9.01□□□□□ -0.97
USP38-201ENST00000307017 C7orf65Q6ZTY9 151 aa9.01□□□□□ -0.97
USP38-201ENST00000307017 Q8IZM0 81 aa9.01□□□□□ -0.97
USP38-201ENST00000307017 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
USP38-201ENST00000307017 PTPN13Q12923 2485 aa9.01□□□□□ -0.97
USP38-201ENST00000307017 FAM208BQ5VWN6 2430 aa9□□□□□ -0.97
USP38-201ENST00000307017 LINC00574Q9H8X3 128 aa9□□□□□ -0.97
USP38-201ENST00000307017 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
USP38-201ENST00000307017 WDR87Q6ZQQ6 2873 aa8.99□□□□□ -0.97
USP38-201ENST00000307017 RPL37AP61513 92 aaKnown RBP8.99□□□□□ -0.97
USP38-201ENST00000307017 MRGPRG-AS1Q2M3A8 158 aa8.99□□□□□ -0.97
USP38-201ENST00000307017 PSMG3-AS1Q96PY0 264 aa8.99□□□□□ -0.97
USP38-201ENST00000307017 SHISA2Q6UWI4 295 aa8.98□□□□□ -0.97
USP38-201ENST00000307017 CENPFP49454 3210 aa8.98□□□□□ -0.97
USP38-201ENST00000307017 COX17Q14061 63 aa8.98□□□□□ -0.97
USP38-201ENST00000307017 ODF3L2Q3SX64 289 aa8.97□□□□□ -0.97
USP38-201ENST00000307017 NAV3Q8IVL0 2385 aa8.97□□□□□ -0.97
USP38-201ENST00000307017 LTBP2Q14767 1821 aa8.97□□□□□ -0.97
USP38-201ENST00000307017 Q6ZRU5 148 aa8.97□□□□□ -0.97
USP38-201ENST00000307017 A0A096LNJ9 63 aa8.96□□□□□ -0.97
USP38-201ENST00000307017 Q8N6K4 173 aa8.96□□□□□ -0.98
USP38-201ENST00000307017 IGLV1-40P01703 118 aa8.95□□□□□ -0.98
USP38-201ENST00000307017 KIAA0087Q14695 138 aa8.94□□□□□ -0.98
USP38-201ENST00000307017 SPACA4Q8TDM5 124 aa8.94□□□□□ -0.98
USP38-201ENST00000307017 FBXL19-AS1Q494R0 122 aa8.94□□□□□ -0.98
USP38-201ENST00000307017 C1orf64Q8NEQ6 169 aa8.94□□□□□ -0.98
USP38-201ENST00000307017 CDIP1Q9H305 208 aa8.94□□□□□ -0.98
USP38-201ENST00000307017 CREBBPQ92793 2442 aa8.93□□□□□ -0.98
USP38-201ENST00000307017 RPL28P46779 137 aaKnown RBP8.93□□□□□ -0.98
USP38-201ENST00000307017 TMEM254Q8TBM7 123 aa8.93□□□□□ -0.98
USP38-201ENST00000307017 C1orf134Q5TEV5 83 aa8.91□□□□□ -0.98
USP38-201ENST00000307017 Q8N2B8 174 aa8.91□□□□□ -0.98
USP38-201ENST00000307017 HIVEP3Q5T1R4 2406 aa8.91□□□□□ -0.98
USP38-201ENST00000307017 FAM218AQ96MZ4 157 aa8.91□□□□□ -0.98
USP38-201ENST00000307017 C2orf48Q96LS8 159 aa8.9□□□□□ -0.98
USP38-201ENST00000307017 HIVEP2P31629 2446 aa8.9□□□□□ -0.98
USP38-201ENST00000307017 DNAH12Q6ZR08 3092 aa8.9□□□□□ -0.99
USP38-201ENST00000307017 ATRXP46100 2492 aa8.89□□□□□ -0.99
USP38-201ENST00000307017 MOBPQ13875 183 aa8.88□□□□□ -0.99
USP38-201ENST00000307017 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
USP38-201ENST00000307017 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
USP38-201ENST00000307017 LYPD5Q6UWN5 251 aa8.87□□□□□ -0.99
USP38-201ENST00000307017 COL27A1Q8IZC6 1860 aaPredicted RBP8.87□□□□□ -0.99
USP38-201ENST00000307017 MUC7Q8TAX7 377 aa8.87□□□□□ -0.99
USP38-201ENST00000307017 C22orf24Q9Y442 160 aa8.87□□□□□ -0.99
USP38-201ENST00000307017 A0A1B0GU69 56 aa8.86□□□□□ -0.99
USP38-201ENST00000307017 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
USP38-201ENST00000307017 A0A1W2PPR1 153 aa8.86□□□□□ -0.99
USP38-201ENST00000307017 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
USP38-201ENST00000307017 SPATA3Q8NHX4 192 aa8.85□□□□□ -0.99
USP38-201ENST00000307017 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
USP38-201ENST00000307017 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
USP38-201ENST00000307017 PHF5AQ7RTV0 110 aaKnown RBP8.85□□□□□ -0.99
USP38-201ENST00000307017 AMELXQ99217 191 aa8.84□□□□□ -0.99
USP38-201ENST00000307017 hDV103S1A0JD37 113 aa8.84□□□□□ -0.99
USP38-201ENST00000307017 EGFEM1PQ0D2K5 195 aa8.84□□□□□ -1
USP38-201ENST00000307017 MUC22E2RYF6 1773 aaPredicted RBP8.83□□□□□ -1
USP38-201ENST00000307017 LINC00474Q9P2X8 69 aa8.83□□□□□ -1
USP38-201ENST00000307017 MUC6Q6W4X9 2439 aa8.83□□□□□ -1
USP38-201ENST00000307017 FAM229AH3BQW9 127 aa8.83□□□□□ -1
USP38-201ENST00000307017 TM2D3Q9BRN9 247 aa8.82□□□□□ -1
USP38-201ENST00000307017 CNFNQ9BYD5 112 aa8.82□□□□□ -1
USP38-201ENST00000307017 SONP18583 2426 aaKnown RBP8.81□□□□□ -1
USP38-201ENST00000307017 A0A0G2JQZ4 141 aa8.81□□□□□ -1
USP38-201ENST00000307017 A0A1W2PNN7 141 aa8.81□□□□□ -1
USP38-201ENST00000307017 PIEZO2Q9H5I5 2752 aa8.8□□□□□ -1
USP38-201ENST00000307017 FAM168BA1KXE4 195 aa8.8□□□□□ -1
USP38-201ENST00000307017 C5orf42Q9H799 3197 aa8.78□□□□□ -1
USP38-201ENST00000307017 IGLV1-51P01701 117 aa8.77□□□□□ -1.01
USP38-201ENST00000307017 C6orf48Q9UBA6 75 aa8.76□□□□□ -1.01
USP38-201ENST00000307017 ATP11AUNQ6ZP68 121 aa8.76□□□□□ -1.01
USP38-201ENST00000307017 BDP1A6H8Y1 2624 aa8.75□□□□□ -1.01
USP38-201ENST00000307017 LINC00167Q96N53 147 aa8.75□□□□□ -1.01
USP38-201ENST00000307017 NHLRC4P0CG21 123 aaPredicted RBP8.73□□□□□ -1.01
USP38-201ENST00000307017 FAM19A4Q96LR4 140 aa8.71□□□□□ -1.01
USP38-201ENST00000307017 PRO0628Q9UI54 55 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms