RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 Q6ZTI0 123 aa12.74□□□□□ -0.37
RETREG1-201ENST00000306320 BEAN1Q3B7T3 259 aa12.73□□□□□ -0.37
RETREG1-201ENST00000306320 RPL35AP18077 110 aaKnown RBP12.73□□□□□ -0.37
RETREG1-201ENST00000306320 LINC01561Q8N1V8 128 aa12.73□□□□□ -0.37
RETREG1-201ENST00000306320 MAP6D1Q9H9H5 199 aa12.73□□□□□ -0.37
RETREG1-201ENST00000306320 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
RETREG1-201ENST00000306320 DNAJC9-AS1A6NH13 148 aa12.72□□□□□ -0.37
RETREG1-201ENST00000306320 IGKV2-28A0A075B6P5 120 aa12.71□□□□□ -0.37
RETREG1-201ENST00000306320 F5H768 121 aa12.71□□□□□ -0.37
RETREG1-201ENST00000306320 IGKV2D-28P01615 120 aa12.71□□□□□ -0.37
RETREG1-201ENST00000306320 COX7B2Q8TF08 81 aa12.71□□□□□ -0.38
RETREG1-201ENST00000306320 TMEM243Q9BU79 118 aa12.71□□□□□ -0.38
RETREG1-201ENST00000306320 FHL2Q14192 279 aa12.7□□□□□ -0.38
RETREG1-201ENST00000306320 NOP10Q9NPE3 64 aaKnown RBP12.7□□□□□ -0.38
RETREG1-201ENST00000306320 CCL18P55774 89 aa12.7□□□□□ -0.38
RETREG1-201ENST00000306320 NTM-AS1Q6ZSK4 140 aa12.7□□□□□ -0.38
RETREG1-201ENST00000306320 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
RETREG1-201ENST00000306320 ATRQ13535 2644 aa12.69□□□□□ -0.38
RETREG1-201ENST00000306320 A0A096LPF7 62 aa12.69□□□□□ -0.38
RETREG1-201ENST00000306320 IGLV5-39A0A0G2JS06 123 aa12.69□□□□□ -0.38
RETREG1-201ENST00000306320 HAMPP81172 84 aa12.69□□□□□ -0.38
RETREG1-201ENST00000306320 DEFB114Q30KQ6 69 aa12.69□□□□□ -0.38
RETREG1-201ENST00000306320 KRTAP1-3Q8IUG1 177 aa12.68□□□□□ -0.38
RETREG1-201ENST00000306320 SNURFQ9Y675 71 aa12.68□□□□□ -0.38
RETREG1-201ENST00000306320 RPL28P46779 137 aaKnown RBP12.68□□□□□ -0.38
RETREG1-201ENST00000306320 XCL1P47992 114 aa12.68□□□□□ -0.38
RETREG1-201ENST00000306320 INSP01308 110 aa12.68□□□□□ -0.38
RETREG1-201ENST00000306320 STHQ8IWL8 128 aa12.68□□□□□ -0.38
RETREG1-201ENST00000306320 TMEM258P61165 79 aa12.67□□□□□ -0.38
RETREG1-201ENST00000306320 FLNBO75369 2602 aaKnown RBP12.67□□□□□ -0.38
RETREG1-201ENST00000306320 FSHBP01225 129 aa12.66□□□□□ -0.38
RETREG1-201ENST00000306320 ORMDL1Q9P0S3 153 aa12.66□□□□□ -0.38
RETREG1-201ENST00000306320 OTOGQ6ZRI0 2925 aa12.66□□□□□ -0.38
RETREG1-201ENST00000306320 ODF3L2Q3SX64 289 aa12.66□□□□□ -0.38
RETREG1-201ENST00000306320 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
RETREG1-201ENST00000306320 PDZD2O15018 2839 aa12.65□□□□□ -0.38
RETREG1-201ENST00000306320 CCL24O00175 119 aa12.65□□□□□ -0.38
RETREG1-201ENST00000306320 C1orf43Q9BWL3 253 aa12.64□□□□□ -0.39
RETREG1-201ENST00000306320 A8MTW9 85 aa12.64□□□□□ -0.39
RETREG1-201ENST00000306320 SCXQ7RTU7 201 aa12.64□□□□□ -0.39
RETREG1-201ENST00000306320 PKIGQ9Y2B9 76 aa12.64□□□□□ -0.39
RETREG1-201ENST00000306320 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 FAM222AQ5U5X8 452 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 IGLV5-45A0A087WSX0 123 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 TRGV4A0A0C4DH28 118 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 K7EQD1 137 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 C4orf3Q8WVX3 66 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 IGLV4-60A0A075B6I1 120 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 Q6JHZ5 121 aa12.63□□□□□ -0.39
RETREG1-201ENST00000306320 LAMTOR3Q9UHA4 124 aa12.62□□□□□ -0.39
RETREG1-201ENST00000306320 C11orf72Q8NBR9 251 aa12.61□□□□□ -0.39
RETREG1-201ENST00000306320 TENM1Q9UKZ4 2725 aa12.61□□□□□ -0.39
RETREG1-201ENST00000306320 UPK3BQ9BT76 320 aa12.61□□□□□ -0.39
RETREG1-201ENST00000306320 IGLV10-54A0A075B6I4 117 aa12.6□□□□□ -0.39
RETREG1-201ENST00000306320 TRAV25A0A0B4J276 109 aa12.59□□□□□ -0.39
RETREG1-201ENST00000306320 H0YGX0 51 aa12.59□□□□□ -0.39
RETREG1-201ENST00000306320 DEFB130BP0DP73 79 aa12.58□□□□□ -0.4
RETREG1-201ENST00000306320 DEFB130AP0DP74 79 aa12.58□□□□□ -0.4
RETREG1-201ENST00000306320 C1orf158Q8N1D5 194 aa12.58□□□□□ -0.4
RETREG1-201ENST00000306320 UBL5Q9BZL1 73 aa12.58□□□□□ -0.4
RETREG1-201ENST00000306320 OVOL2Q9BRP0 275 aa12.57□□□□□ -0.4
RETREG1-201ENST00000306320 LINC01006Q8NI28 216 aa12.57□□□□□ -0.4
RETREG1-201ENST00000306320 TEP1Q99973 2627 aaKnown RBP12.57□□□□□ -0.4
RETREG1-201ENST00000306320 TRRAPQ9Y4A5 3859 aa12.56□□□□□ -0.4
RETREG1-201ENST00000306320 C9orf116Q5BN46 136 aaPredicted RBP12.56□□□□□ -0.4
RETREG1-201ENST00000306320 A0A0U1RQV1 116 aa12.56□□□□□ -0.4
RETREG1-201ENST00000306320 TMEM86BQ8N661 226 aa12.56□□□□□ -0.4
RETREG1-201ENST00000306320 FAM236DA0A1B0GTK5 79 aa12.55□□□□□ -0.4
RETREG1-201ENST00000306320 FAM236CP0DP71 79 aa12.55□□□□□ -0.4
RETREG1-201ENST00000306320 PF4P02776 101 aa12.55□□□□□ -0.4
RETREG1-201ENST00000306320 ANK3Q12955 4377 aaKnown RBP12.54□□□□□ -0.4
RETREG1-201ENST00000306320 RPS28P62857 69 aaKnown RBP12.54□□□□□ -0.4
RETREG1-201ENST00000306320 RMI2Q96E14 147 aa12.54□□□□□ -0.4
RETREG1-201ENST00000306320 DEFB4AO15263 64 aa12.53□□□□□ -0.4
RETREG1-201ENST00000306320 CCKP06307 115 aa12.53□□□□□ -0.4
RETREG1-201ENST00000306320 S100A7L2Q5SY68 101 aa12.53□□□□□ -0.4
RETREG1-201ENST00000306320 RBM3P98179 157 aaKnown RBP12.52□□□□□ -0.4
RETREG1-201ENST00000306320 Q5XG85 94 aa12.52□□□□□ -0.4
RETREG1-201ENST00000306320 C6orf99Q4VX62 202 aa12.51□□□□□ -0.41
RETREG1-201ENST00000306320 SPATA3Q8NHX4 192 aa12.51□□□□□ -0.41
RETREG1-201ENST00000306320 M0R2N4 97 aa12.49□□□□□ -0.41
RETREG1-201ENST00000306320 LINC00336Q6ZUF6 198 aa12.49□□□□□ -0.41
RETREG1-201ENST00000306320 MPLKIPQ8TAP9 179 aa12.49□□□□□ -0.41
RETREG1-201ENST00000306320 TRAV10A0A0B4J240 114 aa12.47□□□□□ -0.41
RETREG1-201ENST00000306320 TRBV6-4A0A1B0GX49 114 aa12.47□□□□□ -0.41
RETREG1-201ENST00000306320 F8WEM9 126 aa12.47□□□□□ -0.41
RETREG1-201ENST00000306320 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
RETREG1-201ENST00000306320 SS18Q15532 418 aa12.46□□□□□ -0.41
RETREG1-201ENST00000306320 LINC00482Q8N8I6 264 aa12.46□□□□□ -0.41
RETREG1-201ENST00000306320 BRK1Q8WUW1 75 aa12.46□□□□□ -0.41
RETREG1-201ENST00000306320 DAD1P61803 113 aa12.46□□□□□ -0.42
RETREG1-201ENST00000306320 KRTAP1-1Q07627 177 aa12.46□□□□□ -0.42
RETREG1-201ENST00000306320 Q8N814 137 aa12.45□□□□□ -0.42
RETREG1-201ENST00000306320 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
RETREG1-201ENST00000306320 HIVEP1P15822 2718 aa12.45□□□□□ -0.42
RETREG1-201ENST00000306320 MRAPQ8TCY5 172 aa12.44□□□□□ -0.42
RETREG1-201ENST00000306320 LINC00474Q9P2X8 69 aa12.44□□□□□ -0.42
RETREG1-201ENST00000306320 IGHV3OR16-9A0A0B4J2B5 98 aa12.43□□□□□ -0.42
RETREG1-201ENST00000306320 GIG44P09565 113 aaPredicted RBP12.43□□□□□ -0.42
RETREG1-201ENST00000306320 JMJD7-PLA2G4BH0Y9G9 81 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms