RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 Q9UF83 564 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
TM4SF1-201ENST00000305366 TIMM17BO60830 172 aa5.51□□□□□ -1.53
TM4SF1-201ENST00000305366 TCL1BO95988 128 aa5.51□□□□□ -1.53
TM4SF1-201ENST00000305366 Q6ZUT4 128 aa5.51□□□□□ -1.53
TM4SF1-201ENST00000305366 FAM19A3Q7Z5A8 133 aa5.51□□□□□ -1.53
TM4SF1-201ENST00000305366 FAM30AQ9NZY2 134 aa5.51□□□□□ -1.53
TM4SF1-201ENST00000305366 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 GAGE12HA6NDE8 117 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 OXTP01178 125 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 FOXI1Q12951 378 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 XCL2Q9UBD3 114 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 NDUFA12Q9UI09 145 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 NACAE9PAV3 2078 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 TRAV4A0A0B4J268 109 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 C1orf195Q5TG92 126 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 TEN1Q86WV5 123 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 LINC01600Q96MT4 127 aa5.5□□□□□ -1.53
TM4SF1-201ENST00000305366 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 SCGB1C2P0DMR2 95 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 RPL36AP83881 106 aaKnown RBP5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 SMAGPQ0VAQ4 97 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 GAGE2BQ13066 116 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 DAZ2Q13117 558 aaKnown RBP5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 MIAQ16674 131 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 GAGE2EQ4V326 116 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 GAGE2AQ6NT46 116 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 DAZ4Q86SG3 579 aaKnown RBP5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 PPDPFLQ8WWR9 84 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 RPL36ALQ969Q0 106 aaKnown RBP5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 DAZ3Q9NR90 486 aaKnown RBP5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 GAGE2DQ9UEU5 116 aa5.49□□□□□ -1.53
TM4SF1-201ENST00000305366 TRGV1A0A0A0MS02 117 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 IGHV3-38A0A0C4DH36 116 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 TRBV30A0A0K0K1B3 111 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 A0A1B0GX51 115 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 K7EQD1 137 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 NDUFA1O15239 70 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 IFITM1P13164 125 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 RNASE13Q5GAN3 156 aaKnown RBP5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 SFTA2Q6UW10 78 aa5.48□□□□□ -1.53
TM4SF1-201ENST00000305366 IGHV3OR16-12A0A075B7B8 117 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 IGHV4-28A0A0C4DH34 117 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 IGLV5-39A0A0G2JS06 123 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 SPINK8P0C7L1 97 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 HERVK_113P63121 156 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 GIG44P09565 113 aaPredicted RBP5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 ATXN8Q156A1 80 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 C16orf74Q96GX8 76 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 TMEM101Q96IK0 257 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 GTSF1LQ9H1H1 148 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 CDKN2A-AS1Q9UH64 79 aa5.47□□□□□ -1.53
TM4SF1-201ENST00000305366 B5MCH6 92 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 SLC25A20O43772 301 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 LINC00242Q5T6M2 205 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 NTM-AS1Q6ZSK4 140 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 Q6ZTC4 211 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 Q6ZTI0 123 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 CARD19Q96LW7 228 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 C11orf68Q9H3H3 251 aaKnown RBP5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 APLNQ9ULZ1 77 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 HERC2O95714 4834 aa5.46□□□□□ -1.54
TM4SF1-201ENST00000305366 PLAC8L1A1L4L8 177 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 H7C423 109 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 J3KT08 172 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 M0R2N4 97 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 KRTAP19-1Q8IUB9 90 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 ANKRD29Q8N6D5 301 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 PRR26Q8N8Z3 221 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 Q8NAQ8 132 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 FRAS1Q86XX4 4008 aa5.45□□□□□ -1.54
TM4SF1-201ENST00000305366 TRIAP1O43715 76 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 PRSS2P07478 247 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 LINC00694P0DN24 101 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 COX6A2Q02221 97 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 CIRBPQ14011 172 aaKnown RBP5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 Q1RN00 199 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 CDC42SE2Q9NRR3 84 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 ICOSQ9Y6W8 199 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 TRBV10-2A0A0K0K1G8 114 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 TRBV6-4A0A1B0GX49 114 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 SMIM1B2RUZ4 78 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 C9JAW5 83 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 LINC00528Q8N1L1 170 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 COPS9Q8WXC6 57 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 CELA1Q9UNI1 258 aa5.44□□□□□ -1.54
TM4SF1-201ENST00000305366 DEFB131BA0A096LNP1 70 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 TRAV10A0A0B4J240 114 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 GAGE12JA6NER3 117 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 TMEM262E9PQX1 116 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 H7C2G1 150 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 COX6CP09669 75 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 GAGE4Q13068 117 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 CSNK1G2-AS1Q8NCQ2 148 aa5.43□□□□□ -1.54
TM4SF1-201ENST00000305366 TMEM243Q9BU79 118 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms