RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 UBE2L6O14933 153 aa7.64□□□□□ -1.19
ZNF558-201ENST00000301475 TMEM243Q9BU79 118 aa7.64□□□□□ -1.19
ZNF558-201ENST00000301475 PAX4O43316 350 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 CCKP06307 115 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 HRCT1Q6UXD1 115 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 SETXQ7Z333 2677 aaKnown RBP7.63□□□□□ -1.19
ZNF558-201ENST00000301475 KMT2BQ9UMN6 2715 aaPredicted RBP7.63□□□□□ -1.19
ZNF558-201ENST00000301475 LOC100131303A0A0U1RQF7 123 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 GHRHP01286 108 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 FAM19A1Q7Z5A9 133 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 ZNF702PQ9H963 129 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 ORMDL1Q9P0S3 153 aa7.63□□□□□ -1.19
ZNF558-201ENST00000301475 TRAV23DV6A0A075B6W5 121 aa7.62□□□□□ -1.19
ZNF558-201ENST00000301475 TRAV25A0A0B4J276 109 aa7.62□□□□□ -1.19
ZNF558-201ENST00000301475 IGHV3OR16-9A0A0B4J2B5 98 aa7.62□□□□□ -1.19
ZNF558-201ENST00000301475 IGLV4-60A0A075B6I1 120 aa7.62□□□□□ -1.19
ZNF558-201ENST00000301475 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
ZNF558-201ENST00000301475 IBA57-AS1B1ANH7 110 aa7.62□□□□□ -1.19
ZNF558-201ENST00000301475 LY6G6DO95868 133 aa7.61□□□□□ -1.19
ZNF558-201ENST00000301475 B4DSR2 109 aa7.61□□□□□ -1.19
ZNF558-201ENST00000301475 ODF3L2Q3SX64 289 aa7.61□□□□□ -1.19
ZNF558-201ENST00000301475 C11orf68Q9H3H3 251 aaKnown RBP7.61□□□□□ -1.19
ZNF558-201ENST00000301475 ENHOQ6UWT2 76 aa7.6□□□□□ -1.19
ZNF558-201ENST00000301475 DYNLRB2Q8TF09 96 aa7.6□□□□□ -1.19
ZNF558-201ENST00000301475 A0A096LNT2 108 aa7.6□□□□□ -1.19
ZNF558-201ENST00000301475 NANOS2P60321 138 aaKnown RBP7.59□□□□□ -1.19
ZNF558-201ENST00000301475 C20orf197Q8N268 126 aa7.59□□□□□ -1.19
ZNF558-201ENST00000301475 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
ZNF558-201ENST00000301475 DEFB114Q30KQ6 69 aa7.59□□□□□ -1.19
ZNF558-201ENST00000301475 NOP10Q9NPE3 64 aaKnown RBP7.59□□□□□ -1.19
ZNF558-201ENST00000301475 A0A087WZ39 114 aa7.58□□□□□ -1.2
ZNF558-201ENST00000301475 ATP5EP2Q5VTU8 51 aa7.58□□□□□ -1.2
ZNF558-201ENST00000301475 LYPD5Q6UWN5 251 aa7.57□□□□□ -1.2
ZNF558-201ENST00000301475 NDUFC2O95298 119 aa7.57□□□□□ -1.2
ZNF558-201ENST00000301475 PRR3P79522 188 aaKnown RBP7.57□□□□□ -1.2
ZNF558-201ENST00000301475 S100A7L2Q5SY68 101 aa7.57□□□□□ -1.2
ZNF558-201ENST00000301475 KHDC1LQ5JSQ8 128 aa7.57□□□□□ -1.2
ZNF558-201ENST00000301475 STHQ8IWL8 128 aa7.57□□□□□ -1.2
ZNF558-201ENST00000301475 Q8N814 137 aa7.57□□□□□ -1.2
ZNF558-201ENST00000301475 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
ZNF558-201ENST00000301475 JMJD7-PLA2G4BH0Y9G9 81 aa7.56□□□□□ -1.2
ZNF558-201ENST00000301475 XCL1P47992 114 aa7.55□□□□□ -1.2
ZNF558-201ENST00000301475 FAM236DA0A1B0GTK5 79 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 PLAC8L1A1L4L8 177 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 FAM236CP0DP71 79 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 CR1P17927 2039 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 TRBV6-8A0A0A6YYG3 113 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 C6orf226Q5I0X4 101 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 FN1P02751 2386 aaKnown RBP7.54□□□□□ -1.2
ZNF558-201ENST00000301475 TRGV2A0A075B6R0 118 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 H7BZZ5 65 aa7.54□□□□□ -1.2
ZNF558-201ENST00000301475 TMEM256-PLSCR3K7ERE1 68 aa7.53□□□□□ -1.2
ZNF558-201ENST00000301475 PLA2G2AP14555 144 aa7.53□□□□□ -1.2
ZNF558-201ENST00000301475 C4orf3Q8WVX3 66 aa7.53□□□□□ -1.2
ZNF558-201ENST00000301475 LINC00959A0A1B0GUT2 108 aa7.53□□□□□ -1.2
ZNF558-201ENST00000301475 EPM2AB3EWF7 344 aa7.53□□□□□ -1.2
ZNF558-201ENST00000301475 M0R2N4 97 aa7.53□□□□□ -1.2
ZNF558-201ENST00000301475 RNASE1P07998 156 aaKnown RBP7.53□□□□□ -1.2
ZNF558-201ENST00000301475 UBL5Q9BZL1 73 aa7.53□□□□□ -1.2
ZNF558-201ENST00000301475 TRBV10-3A0A0K0K1G6 114 aa7.52□□□□□ -1.21
ZNF558-201ENST00000301475 GIG44P09565 113 aaPredicted RBP7.52□□□□□ -1.21
ZNF558-201ENST00000301475 DEFB113Q30KQ7 82 aa7.52□□□□□ -1.21
ZNF558-201ENST00000301475 Q6YL49 198 aa7.52□□□□□ -1.21
ZNF558-201ENST00000301475 PDZD2O15018 2839 aa7.52□□□□□ -1.21
ZNF558-201ENST00000301475 LINC01356Q8N9X3 169 aa7.52□□□□□ -1.21
ZNF558-201ENST00000301475 HIVEP2P31629 2446 aa7.52□□□□□ -1.21
ZNF558-201ENST00000301475 TMEM86BQ8N661 226 aa7.52□□□□□ -1.21
ZNF558-201ENST00000301475 J3QKU1 62 aa7.51□□□□□ -1.21
ZNF558-201ENST00000301475 WFDC11Q8NEX6 87 aa7.51□□□□□ -1.21
ZNF558-201ENST00000301475 TRGV4A0A0C4DH28 118 aa7.51□□□□□ -1.21
ZNF558-201ENST00000301475 DSCR9P59020 149 aa7.51□□□□□ -1.21
ZNF558-201ENST00000301475 Q8NDZ9 215 aa7.51□□□□□ -1.21
ZNF558-201ENST00000301475 OTOGQ6ZRI0 2925 aa7.5□□□□□ -1.21
ZNF558-201ENST00000301475 CLPSL2Q6UWE3 100 aa7.5□□□□□ -1.21
ZNF558-201ENST00000301475 Q6ZQT0 140 aa7.5□□□□□ -1.21
ZNF558-201ENST00000301475 WFDC10AQ9H1F0 79 aa7.5□□□□□ -1.21
ZNF558-201ENST00000301475 NBEAL2Q6ZNJ1 2754 aa7.5□□□□□ -1.21
ZNF558-201ENST00000301475 C6orf99Q4VX62 202 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 Q8IZM0 81 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 TRAV10A0A0B4J240 114 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 FSHBP01225 129 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 SPATA3Q8NHX4 192 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 SNURFQ9Y675 71 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 SERP1Q9Y6X1 66 aa7.49□□□□□ -1.21
ZNF558-201ENST00000301475 LINC01547P58512 204 aaPredicted RBP7.48□□□□□ -1.21
ZNF558-201ENST00000301475 C16orf74Q96GX8 76 aa7.48□□□□□ -1.21
ZNF558-201ENST00000301475 IGHV4-31P0DP07 118 aa7.48□□□□□ -1.21
ZNF558-201ENST00000301475 LINC00336Q6ZUF6 198 aa7.48□□□□□ -1.21
ZNF558-201ENST00000301475 KLKP1Q107X0 134 aa7.47□□□□□ -1.21
ZNF558-201ENST00000301475 C9orf116Q5BN46 136 aaPredicted RBP7.47□□□□□ -1.21
ZNF558-201ENST00000301475 LINC00482Q8N8I6 264 aa7.47□□□□□ -1.21
ZNF558-201ENST00000301475 RMI2Q96E14 147 aa7.47□□□□□ -1.21
ZNF558-201ENST00000301475 J3QLI3 93 aa7.47□□□□□ -1.21
ZNF558-201ENST00000301475 C11orf44Q8N8P7 122 aa7.46□□□□□ -1.21
ZNF558-201ENST00000301475 RBM3P98179 157 aaKnown RBP7.46□□□□□ -1.22
ZNF558-201ENST00000301475 LINC00575Q6W349 94 aa7.46□□□□□ -1.22
ZNF558-201ENST00000301475 Q6ZVQ6 151 aa7.46□□□□□ -1.22
ZNF558-201ENST00000301475 MRAPQ8TCY5 172 aa7.46□□□□□ -1.22
ZNF558-201ENST00000301475 RPL35AP18077 110 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms