RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CFAP46Q8IYW2 2715 aa10.3□□□□□ -0.76
COL6A2-201ENST00000300527 MTORP42345 2549 aa10.3□□□□□ -0.76
COL6A2-201ENST00000300527 OXTP01178 125 aa10.29□□□□□ -0.76
COL6A2-201ENST00000300527 TMEM86BQ8N661 226 aa10.29□□□□□ -0.76
COL6A2-201ENST00000300527 TMEM258P61165 79 aa10.29□□□□□ -0.76
COL6A2-201ENST00000300527 IGLV10-54A0A075B6I4 117 aa10.28□□□□□ -0.76
COL6A2-201ENST00000300527 FHL2Q14192 279 aa10.28□□□□□ -0.76
COL6A2-201ENST00000300527 A8MTW9 85 aa10.27□□□□□ -0.76
COL6A2-201ENST00000300527 IBA57-AS1B1ANH7 110 aa10.27□□□□□ -0.76
COL6A2-201ENST00000300527 PIEZO1Q92508 2521 aa10.27□□□□□ -0.77
COL6A2-201ENST00000300527 HAMPP81172 84 aa10.27□□□□□ -0.77
COL6A2-201ENST00000300527 IGHV3OR16-9A0A0B4J2B5 98 aa10.27□□□□□ -0.77
COL6A2-201ENST00000300527 C9orf116Q5BN46 136 aaPredicted RBP10.26□□□□□ -0.77
COL6A2-201ENST00000300527 Q6YL49 198 aa10.26□□□□□ -0.77
COL6A2-201ENST00000300527 TRBV6-4A0A1B0GX49 114 aa10.26□□□□□ -0.77
COL6A2-201ENST00000300527 CCKP06307 115 aa10.26□□□□□ -0.77
COL6A2-201ENST00000300527 PRB1P04280 392 aa10.26□□□□□ -0.77
COL6A2-201ENST00000300527 LAMTOR3Q9UHA4 124 aa10.26□□□□□ -0.77
COL6A2-201ENST00000300527 TRBV6-8A0A0A6YYG3 113 aa10.25□□□□□ -0.77
COL6A2-201ENST00000300527 UBL5Q9BZL1 73 aa10.24□□□□□ -0.77
COL6A2-201ENST00000300527 FAM19A3Q7Z5A8 133 aa10.24□□□□□ -0.77
COL6A2-201ENST00000300527 C4orf3Q8WVX3 66 aa10.24□□□□□ -0.77
COL6A2-201ENST00000300527 UPK3BQ9BT76 320 aa10.24□□□□□ -0.77
COL6A2-201ENST00000300527 GCN1Q92616 2671 aaKnown RBP10.24□□□□□ -0.77
COL6A2-201ENST00000300527 SETXQ7Z333 2677 aaKnown RBP10.24□□□□□ -0.77
COL6A2-201ENST00000300527 LINC00959A0A1B0GUT2 108 aa10.23□□□□□ -0.77
COL6A2-201ENST00000300527 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
COL6A2-201ENST00000300527 S100A7L2Q5SY68 101 aa10.23□□□□□ -0.77
COL6A2-201ENST00000300527 ESM1Q9NQ30 184 aa10.23□□□□□ -0.77
COL6A2-201ENST00000300527 SS18Q15532 418 aa10.23□□□□□ -0.77
COL6A2-201ENST00000300527 A0A087WZ39 114 aa10.22□□□□□ -0.77
COL6A2-201ENST00000300527 SNURFQ9Y675 71 aa10.22□□□□□ -0.77
COL6A2-201ENST00000300527 RPS28P62857 69 aaKnown RBP10.21□□□□□ -0.77
COL6A2-201ENST00000300527 SCXQ7RTU7 201 aa10.21□□□□□ -0.77
COL6A2-201ENST00000300527 Q8N814 137 aa10.21□□□□□ -0.77
COL6A2-201ENST00000300527 ACANP16112 2415 aa10.21□□□□□ -0.77
COL6A2-201ENST00000300527 CCL24O00175 119 aa10.2□□□□□ -0.78
COL6A2-201ENST00000300527 GYPEP15421 78 aa10.2□□□□□ -0.78
COL6A2-201ENST00000300527 LINC00269Q8N2A0 174 aa10.2□□□□□ -0.78
COL6A2-201ENST00000300527 OBSCN-AS1Q96MR7 158 aa10.2□□□□□ -0.78
COL6A2-201ENST00000300527 JMJD7-PLA2G4BH0Y9G9 81 aa10.19□□□□□ -0.78
COL6A2-201ENST00000300527 WFDC11Q8NEX6 87 aa10.19□□□□□ -0.78
COL6A2-201ENST00000300527 TMEM256-PLSCR3K7ERE1 68 aa10.18□□□□□ -0.78
COL6A2-201ENST00000300527 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
COL6A2-201ENST00000300527 C16orf74Q96GX8 76 aa10.18□□□□□ -0.78
COL6A2-201ENST00000300527 Q8N3U1 123 aa10.18□□□□□ -0.78
COL6A2-201ENST00000300527 M0R2N4 97 aa10.17□□□□□ -0.78
COL6A2-201ENST00000300527 ZNF462Q96JM2 2506 aa10.17□□□□□ -0.78
COL6A2-201ENST00000300527 J3QLI3 93 aa10.16□□□□□ -0.78
COL6A2-201ENST00000300527 A0A096LNT2 108 aa10.16□□□□□ -0.78
COL6A2-201ENST00000300527 FAM236DA0A1B0GTK5 79 aa10.16□□□□□ -0.78
COL6A2-201ENST00000300527 IGHV4-31P0DP07 118 aa10.16□□□□□ -0.78
COL6A2-201ENST00000300527 FAM236CP0DP71 79 aa10.16□□□□□ -0.78
COL6A2-201ENST00000300527 DSCR9P59020 149 aa10.16□□□□□ -0.78
COL6A2-201ENST00000300527 DEFB4AO15263 64 aa10.15□□□□□ -0.78
COL6A2-201ENST00000300527 GIG44P09565 113 aaPredicted RBP10.15□□□□□ -0.78
COL6A2-201ENST00000300527 NANOS2P60321 138 aaKnown RBP10.15□□□□□ -0.78
COL6A2-201ENST00000300527 RBM3P98179 157 aaKnown RBP10.15□□□□□ -0.78
COL6A2-201ENST00000300527 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.79
COL6A2-201ENST00000300527 ANGP03950 147 aaKnown RBP10.15□□□□□ -0.79
COL6A2-201ENST00000300527 HIVEP2P31629 2446 aa10.14□□□□□ -0.79
COL6A2-201ENST00000300527 APCP25054 2843 aa10.13□□□□□ -0.79
COL6A2-201ENST00000300527 RMI2Q96E14 147 aa10.13□□□□□ -0.79
COL6A2-201ENST00000300527 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
COL6A2-201ENST00000300527 SPATA3Q8NHX4 192 aa10.13□□□□□ -0.79
COL6A2-201ENST00000300527 KRTAP10-9P60411 292 aa10.12□□□□□ -0.79
COL6A2-201ENST00000300527 Q5XG85 94 aa10.12□□□□□ -0.79
COL6A2-201ENST00000300527 ZNF843Q8N446 348 aa10.12□□□□□ -0.79
COL6A2-201ENST00000300527 AKAP9Q99996 3911 aa10.11□□□□□ -0.79
COL6A2-201ENST00000300527 NDUFC2O95298 119 aa10.11□□□□□ -0.79
COL6A2-201ENST00000300527 LY6G6DO95868 133 aa10.11□□□□□ -0.79
COL6A2-201ENST00000300527 C6orf223Q8N319 242 aa10.11□□□□□ -0.79
COL6A2-201ENST00000300527 BBC3Q96PG8 261 aaPredicted RBP10.11□□□□□ -0.79
COL6A2-201ENST00000300527 Q6ZQY7 126 aa10.11□□□□□ -0.79
COL6A2-201ENST00000300527 Q8NDZ9 215 aa10.11□□□□□ -0.79
COL6A2-201ENST00000300527 IGSF10Q6WRI0 2623 aa10.1□□□□□ -0.79
COL6A2-201ENST00000300527 HTN3P15516 51 aa10.1□□□□□ -0.79
COL6A2-201ENST00000300527 ATP5EP2Q5VTU8 51 aa10.1□□□□□ -0.79
COL6A2-201ENST00000300527 Q8IZM0 81 aa10.1□□□□□ -0.79
COL6A2-201ENST00000300527 CHCHD10Q8WYQ3 142 aaPredicted RBP10.1□□□□□ -0.79
COL6A2-201ENST00000300527 CR1P17927 2039 aa10.09□□□□□ -0.79
COL6A2-201ENST00000300527 TRAV25A0A0B4J276 109 aa10.09□□□□□ -0.79
COL6A2-201ENST00000300527 LINC01547P58512 204 aaPredicted RBP10.08□□□□□ -0.8
COL6A2-201ENST00000300527 UNQ6190/PRO20217Q6UXQ8 127 aa10.08□□□□□ -0.8
COL6A2-201ENST00000300527 XAGE1AQ9HD64 81 aa10.08□□□□□ -0.8
COL6A2-201ENST00000300527 F8WEM9 126 aa10.08□□□□□ -0.8
COL6A2-201ENST00000300527 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
COL6A2-201ENST00000300527 Q6ZVQ6 151 aa10.07□□□□□ -0.8
COL6A2-201ENST00000300527 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
COL6A2-201ENST00000300527 FLNAP21333 2647 aaKnown RBP10.07□□□□□ -0.8
COL6A2-201ENST00000300527 LINC00575Q6W349 94 aa10.06□□□□□ -0.8
COL6A2-201ENST00000300527 DNAJC9-AS1A6NH13 148 aa10.06□□□□□ -0.8
COL6A2-201ENST00000300527 Q6ZQT0 140 aa10.06□□□□□ -0.8
COL6A2-201ENST00000300527 NBPF19A0A087WUL8 3843 aa10.05□□□□□ -0.8
COL6A2-201ENST00000300527 TRAV7A0A075B6U4 112 aa10.04□□□□□ -0.8
COL6A2-201ENST00000300527 H7BZZ5 65 aa10.04□□□□□ -0.8
COL6A2-201ENST00000300527 FSHBP01225 129 aa10.04□□□□□ -0.8
COL6A2-201ENST00000300527 REG3AQ06141 175 aa10.04□□□□□ -0.8
COL6A2-201ENST00000300527 Q8N9L7 120 aa10.04□□□□□ -0.8
COL6A2-201ENST00000300527 C1orf43Q9BWL3 253 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms