RNA–Protein interactions for RNA: ENST00000299314.11

GNPTAB-201, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNPTAB, Length 5,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-201ENST00000299314 CDIP1Q9H305 208 aa17.12■□□□□ 0.33
GNPTAB-201ENST00000299314 H0Y9P7 68 aa17.12■□□□□ 0.33
GNPTAB-201ENST00000299314 Q6ZTC4 211 aa17.12■□□□□ 0.33
GNPTAB-201ENST00000299314 TMEM254Q8TBM7 123 aa17.11■□□□□ 0.33
GNPTAB-201ENST00000299314 F8WDY8 70 aa17.11■□□□□ 0.33
GNPTAB-201ENST00000299314 SORL1Q92673 2214 aa17.11■□□□□ 0.33
GNPTAB-201ENST00000299314 A0A087WSZ3 146 aa17.1■□□□□ 0.33
GNPTAB-201ENST00000299314 A8MTW9 85 aa17.1■□□□□ 0.33
GNPTAB-201ENST00000299314 CSPG4Q6UVK1 2322 aa17.1■□□□□ 0.33
GNPTAB-201ENST00000299314 LINC00337Q8N6G1 96 aa17.1■□□□□ 0.33
GNPTAB-201ENST00000299314 SMR3AQ99954 134 aa17.1■□□□□ 0.33
GNPTAB-201ENST00000299314 LRP4O75096 1905 aa17.1■□□□□ 0.33
GNPTAB-201ENST00000299314 LINC01561Q8N1V8 128 aa17.1■□□□□ 0.33
GNPTAB-201ENST00000299314 DEFB116Q30KQ4 102 aa17.09■□□□□ 0.33
GNPTAB-201ENST00000299314 RETNLBQ9BQ08 111 aa17.09■□□□□ 0.33
GNPTAB-201ENST00000299314 C2orf48Q96LS8 159 aa17.08■□□□□ 0.33
GNPTAB-201ENST00000299314 ACACBO00763 2458 aa17.08■□□□□ 0.33
GNPTAB-201ENST00000299314 LINC01546A6NGU7 62 aa17.08■□□□□ 0.32
GNPTAB-201ENST00000299314 KRTAP10-9P60411 292 aa17.07■□□□□ 0.32
GNPTAB-201ENST00000299314 BDP1A6H8Y1 2624 aa17.06■□□□□ 0.32
GNPTAB-201ENST00000299314 HCG22E2RYF7 251 aa17.06■□□□□ 0.32
GNPTAB-201ENST00000299314 PTPRSQ13332 1948 aa17.06■□□□□ 0.32
GNPTAB-201ENST00000299314 C16orf95Q9H693 158 aa17.05■□□□□ 0.32
GNPTAB-201ENST00000299314 KIF25-AS1Q9Y6Z4 181 aa17.04■□□□□ 0.32
GNPTAB-201ENST00000299314 LYPD5Q6UWN5 251 aa17.04■□□□□ 0.32
GNPTAB-201ENST00000299314 NUPR2A6NF83 97 aa17.04■□□□□ 0.32
GNPTAB-201ENST00000299314 A0A1W2PPR1 153 aa17.02■□□□□ 0.32
GNPTAB-201ENST00000299314 CXCL6P80162 114 aa17.02■□□□□ 0.32
GNPTAB-201ENST00000299314 LINC01556Q5JQF7 62 aa17.01■□□□□ 0.31
GNPTAB-201ENST00000299314 Q6ZRU5 148 aa17.01■□□□□ 0.31
GNPTAB-201ENST00000299314 IGLV5-52A0A0A0MRZ9 124 aa17■□□□□ 0.31
GNPTAB-201ENST00000299314 PLA2G2AP14555 144 aa17■□□□□ 0.31
GNPTAB-201ENST00000299314 OTOGLQ3ZCN5 2332 aa17■□□□□ 0.31
GNPTAB-201ENST00000299314 CPAMD8Q8IZJ3 1885 aa16.99■□□□□ 0.31
GNPTAB-201ENST00000299314 IGLV5-39A0A0G2JS06 123 aa16.98■□□□□ 0.31
GNPTAB-201ENST00000299314 RAI1Q7Z5J4 1906 aaPredicted RBP16.97■□□□□ 0.31
GNPTAB-201ENST00000299314 CRYGAP11844 174 aa16.97■□□□□ 0.31
GNPTAB-201ENST00000299314 CUL9Q8IWT3 2517 aa16.96■□□□□ 0.31
GNPTAB-201ENST00000299314 NAV3Q8IVL0 2385 aa16.96■□□□□ 0.31
GNPTAB-201ENST00000299314 hDV103S1A0JD37 113 aa16.96■□□□□ 0.31
GNPTAB-201ENST00000299314 SPINK1P00995 79 aa16.95■□□□□ 0.3
GNPTAB-201ENST00000299314 SBSPONQ8IVN8 264 aa16.94■□□□□ 0.3
GNPTAB-201ENST00000299314 X6R8D5 127 aa16.93■□□□□ 0.3
GNPTAB-201ENST00000299314 C11orf72Q8NBR9 251 aa16.93■□□□□ 0.3
GNPTAB-201ENST00000299314 PRLHP81277 87 aa16.92■□□□□ 0.3
GNPTAB-201ENST00000299314 TTC28Q96AY4 2481 aa16.92■□□□□ 0.3
GNPTAB-201ENST00000299314 SMCPP49901 116 aaPredicted RBP16.92■□□□□ 0.3
GNPTAB-201ENST00000299314 NOTCH2Q04721 2471 aa16.9■□□□□ 0.3
GNPTAB-201ENST00000299314 SMIM29Q86T20 159 aa16.9■□□□□ 0.3
GNPTAB-201ENST00000299314 SPATA3Q8NHX4 192 aa16.89■□□□□ 0.29
GNPTAB-201ENST00000299314 C1orf64Q8NEQ6 169 aa16.89■□□□□ 0.29
GNPTAB-201ENST00000299314 Q8N2B8 174 aa16.89■□□□□ 0.29
GNPTAB-201ENST00000299314 C22orf24Q9Y442 160 aa16.88■□□□□ 0.29
GNPTAB-201ENST00000299314 KIAA0087Q14695 138 aa16.88■□□□□ 0.29
GNPTAB-201ENST00000299314 LINC00315P59091 139 aa16.87■□□□□ 0.29
GNPTAB-201ENST00000299314 SMCR5Q8TEV8 140 aa16.87■□□□□ 0.29
GNPTAB-201ENST00000299314 PTPN13Q12923 2485 aa16.86■□□□□ 0.29
GNPTAB-201ENST00000299314 FAM19A4Q96LR4 140 aa16.85■□□□□ 0.29
GNPTAB-201ENST00000299314 Q9UF83 564 aa16.84■□□□□ 0.29
GNPTAB-201ENST00000299314 ATRXP46100 2492 aa16.84■□□□□ 0.29
GNPTAB-201ENST00000299314 IGHV3OR16-9A0A0B4J2B5 98 aa16.84■□□□□ 0.29
GNPTAB-201ENST00000299314 COL5A1P20908 1838 aaPredicted RBP16.84■□□□□ 0.29
GNPTAB-201ENST00000299314 SONP18583 2426 aaKnown RBP16.83■□□□□ 0.29
GNPTAB-201ENST00000299314 HIVEP3Q5T1R4 2406 aa16.83■□□□□ 0.29
GNPTAB-201ENST00000299314 PRO0461Q9UI25 63 aa16.83■□□□□ 0.28
GNPTAB-201ENST00000299314 FAM218AQ96MZ4 157 aa16.81■□□□□ 0.28
GNPTAB-201ENST00000299314 C2CD3Q4AC94 2353 aa16.81■□□□□ 0.28
GNPTAB-201ENST00000299314 EXPH5Q8NEV8 1989 aa16.79■□□□□ 0.28
GNPTAB-201ENST00000299314 LIMD2Q9BT23 127 aa16.79■□□□□ 0.28
GNPTAB-201ENST00000299314 PRO0628Q9UI54 55 aa16.79■□□□□ 0.28
GNPTAB-201ENST00000299314 IGLV5-45A0A087WSX0 123 aa16.77■□□□□ 0.27
GNPTAB-201ENST00000299314 NAV2Q8IVL1 2488 aa16.77■□□□□ 0.27
GNPTAB-201ENST00000299314 C1orf134Q5TEV5 83 aa16.75■□□□□ 0.27
GNPTAB-201ENST00000299314 BCE1O60756 84 aa16.74■□□□□ 0.27
GNPTAB-201ENST00000299314 C6orf48Q9UBA6 75 aa16.73■□□□□ 0.27
GNPTAB-201ENST00000299314 CACNA1AO00555 2505 aa16.72■□□□□ 0.27
GNPTAB-201ENST00000299314 PRRC2AP48634 2157 aaKnown RBP16.71■□□□□ 0.27
GNPTAB-201ENST00000299314 LINC00167Q96N53 147 aa16.7■□□□□ 0.26
GNPTAB-201ENST00000299314 C4orf26Q17RF5 130 aa16.69■□□□□ 0.26
GNPTAB-201ENST00000299314 AGRNO00468 2067 aa16.69■□□□□ 0.26
GNPTAB-201ENST00000299314 ADAMTS20P59510 1910 aa16.69■□□□□ 0.26
GNPTAB-201ENST00000299314 IGKV2D-30A0A075B6S6 120 aa16.69■□□□□ 0.26
GNPTAB-201ENST00000299314 IGKV2-30P06310 120 aa16.69■□□□□ 0.26
GNPTAB-201ENST00000299314 ELOF1P60002 83 aaKnown RBP16.69■□□□□ 0.26
GNPTAB-201ENST00000299314 Q6ZQT0 140 aa16.68■□□□□ 0.26
GNPTAB-201ENST00000299314 FHL3Q13643 280 aa16.67■□□□□ 0.26
GNPTAB-201ENST00000299314 C7orf65Q6ZTY9 151 aa16.67■□□□□ 0.26
GNPTAB-201ENST00000299314 TP53AIP1Q9HCN2 124 aa16.66■□□□□ 0.26
GNPTAB-201ENST00000299314 A0A1B0GU69 56 aa16.65■□□□□ 0.26
GNPTAB-201ENST00000299314 RPS28P62857 69 aaKnown RBP16.65■□□□□ 0.26
GNPTAB-201ENST00000299314 LOC110117498A0A087WWA1 95 aa16.64■□□□□ 0.25
GNPTAB-201ENST00000299314 A0A1B0GW54 56 aa16.61■□□□□ 0.25
GNPTAB-201ENST00000299314 ACYP2P14621 99 aa16.59■□□□□ 0.25
GNPTAB-201ENST00000299314 MOBPQ13875 183 aa16.59■□□□□ 0.25
GNPTAB-201ENST00000299314 SPAG11AQ6PDA7 123 aa16.56■□□□□ 0.24
GNPTAB-201ENST00000299314 LINC00476Q8WZB0 136 aa16.54■□□□□ 0.24
GNPTAB-201ENST00000299314 TET2Q6N021 2002 aaPredicted RBP16.54■□□□□ 0.24
GNPTAB-201ENST00000299314 Q8NBF4 154 aa16.54■□□□□ 0.24
GNPTAB-201ENST00000299314 Q6ZRX8 168 aa16.54■□□□□ 0.24
GNPTAB-201ENST00000299314 CCDC168Q8NDH2 2452 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms