RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 EGFEM1PQ0D2K5 195 aa11.78□□□□□ -0.52
SNAPC4-201ENST00000298532 C9orf116Q5BN46 136 aaPredicted RBP11.78□□□□□ -0.52
SNAPC4-201ENST00000298532 KPRPQ5T749 579 aaPredicted RBP11.78□□□□□ -0.52
SNAPC4-201ENST00000298532 A0A1W2PPR1 153 aa11.78□□□□□ -0.52
SNAPC4-201ENST00000298532 LRCOL1A6NCL2 159 aa11.78□□□□□ -0.52
SNAPC4-201ENST00000298532 TRAV10A0A0B4J240 114 aa11.77□□□□□ -0.53
SNAPC4-201ENST00000298532 RPL37AP8A6NKH3 93 aa11.77□□□□□ -0.53
SNAPC4-201ENST00000298532 PMAIP1Q13794 54 aa11.77□□□□□ -0.53
SNAPC4-201ENST00000298532 ABCA2Q9BZC7 2435 aa11.77□□□□□ -0.53
SNAPC4-201ENST00000298532 SMR3AQ99954 134 aa11.77□□□□□ -0.53
SNAPC4-201ENST00000298532 K7ERS5 55 aa11.76□□□□□ -0.53
SNAPC4-201ENST00000298532 C1orf137Q5JT78 98 aa11.76□□□□□ -0.53
SNAPC4-201ENST00000298532 CRYGAP11844 174 aa11.75□□□□□ -0.53
SNAPC4-201ENST00000298532 Q6ZVQ6 151 aa11.75□□□□□ -0.53
SNAPC4-201ENST00000298532 TMEM254Q8TBM7 123 aa11.75□□□□□ -0.53
SNAPC4-201ENST00000298532 LINC00208Q96KT6 92 aa11.75□□□□□ -0.53
SNAPC4-201ENST00000298532 LINC00337Q8N6G1 96 aa11.75□□□□□ -0.53
SNAPC4-201ENST00000298532 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
SNAPC4-201ENST00000298532 Q6ZSN1 163 aa11.75□□□□□ -0.53
SNAPC4-201ENST00000298532 CHD8Q9HCK8 2581 aa11.74□□□□□ -0.53
SNAPC4-201ENST00000298532 SRCAPQ6ZRS2 3230 aa11.74□□□□□ -0.53
SNAPC4-201ENST00000298532 CEP295Q9C0D2 2601 aa11.74□□□□□ -0.53
SNAPC4-201ENST00000298532 WDR87Q6ZQQ6 2873 aa11.73□□□□□ -0.53
SNAPC4-201ENST00000298532 ADAMTS20P59510 1910 aa11.72□□□□□ -0.53
SNAPC4-201ENST00000298532 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.72□□□□□ -0.53
SNAPC4-201ENST00000298532 LINC01547P58512 204 aaPredicted RBP11.72□□□□□ -0.53
SNAPC4-201ENST00000298532 SBSPONQ8IVN8 264 aa11.72□□□□□ -0.53
SNAPC4-201ENST00000298532 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.53
SNAPC4-201ENST00000298532 LINC00575Q6W349 94 aa11.71□□□□□ -0.53
SNAPC4-201ENST00000298532 FHL2Q14192 279 aa11.7□□□□□ -0.54
SNAPC4-201ENST00000298532 TRBV7-6A0A0J9YX20 115 aa11.7□□□□□ -0.54
SNAPC4-201ENST00000298532 RPS28P62857 69 aaKnown RBP11.69□□□□□ -0.54
SNAPC4-201ENST00000298532 PRO0628Q9UI54 55 aa11.69□□□□□ -0.54
SNAPC4-201ENST00000298532 ZNF706Q9Y5V0 76 aaPredicted RBP11.69□□□□□ -0.54
SNAPC4-201ENST00000298532 SPTBN4Q9H254 2564 aa11.69□□□□□ -0.54
SNAPC4-201ENST00000298532 LINC00315P59091 139 aa11.68□□□□□ -0.54
SNAPC4-201ENST00000298532 CXCL6P80162 114 aa11.68□□□□□ -0.54
SNAPC4-201ENST00000298532 A0A1B0GUV1 79 aa11.68□□□□□ -0.54
SNAPC4-201ENST00000298532 LINC01561Q8N1V8 128 aa11.68□□□□□ -0.54
SNAPC4-201ENST00000298532 SPINK6Q6UWN8 80 aa11.68□□□□□ -0.54
SNAPC4-201ENST00000298532 TET2Q6N021 2002 aaPredicted RBP11.67□□□□□ -0.54
SNAPC4-201ENST00000298532 PSPHP1O15172 72 aa11.66□□□□□ -0.54
SNAPC4-201ENST00000298532 NANOS2P60321 138 aaKnown RBP11.66□□□□□ -0.54
SNAPC4-201ENST00000298532 ESRGQ1W209 222 aa11.66□□□□□ -0.54
SNAPC4-201ENST00000298532 Q8N2B8 174 aa11.65□□□□□ -0.54
SNAPC4-201ENST00000298532 DOPEY1Q5JWR5 2465 aa11.65□□□□□ -0.54
SNAPC4-201ENST00000298532 BCE1O60756 84 aa11.64□□□□□ -0.55
SNAPC4-201ENST00000298532 C10orf25Q5T742 122 aa11.64□□□□□ -0.55
SNAPC4-201ENST00000298532 IGLV1-51P01701 117 aa11.63□□□□□ -0.55
SNAPC4-201ENST00000298532 PLAC8L1A1L4L8 177 aa11.62□□□□□ -0.55
SNAPC4-201ENST00000298532 OXLD1Q5BKU9 147 aa11.62□□□□□ -0.55
SNAPC4-201ENST00000298532 EXPH5Q8NEV8 1989 aa11.62□□□□□ -0.55
SNAPC4-201ENST00000298532 NUPR2A6NF83 97 aa11.61□□□□□ -0.55
SNAPC4-201ENST00000298532 IGHV4-30-4P0DP06 118 aa11.61□□□□□ -0.55
SNAPC4-201ENST00000298532 C6orf223Q8N319 242 aa11.6□□□□□ -0.55
SNAPC4-201ENST00000298532 FAM19A4Q96LR4 140 aa11.6□□□□□ -0.55
SNAPC4-201ENST00000298532 IGLV9-49A0A0B4J1Y8 123 aa11.6□□□□□ -0.55
SNAPC4-201ENST00000298532 A8MTW9 85 aa11.6□□□□□ -0.55
SNAPC4-201ENST00000298532 IGLV5-45A0A087WSX0 123 aa11.6□□□□□ -0.55
SNAPC4-201ENST00000298532 NHLRC4P0CG21 123 aaPredicted RBP11.6□□□□□ -0.55
SNAPC4-201ENST00000298532 ZNF462Q96JM2 2506 aa11.59□□□□□ -0.55
SNAPC4-201ENST00000298532 REG3GQ6UW15 175 aa11.59□□□□□ -0.55
SNAPC4-201ENST00000298532 IGHV3OR16-9A0A0B4J2B5 98 aa11.58□□□□□ -0.56
SNAPC4-201ENST00000298532 F8WDY8 70 aa11.58□□□□□ -0.56
SNAPC4-201ENST00000298532 C11orf72Q8NBR9 251 aa11.57□□□□□ -0.56
SNAPC4-201ENST00000298532 C2orf48Q96LS8 159 aa11.57□□□□□ -0.56
SNAPC4-201ENST00000298532 FAM218AQ96MZ4 157 aa11.57□□□□□ -0.56
SNAPC4-201ENST00000298532 LINC00474Q9P2X8 69 aa11.57□□□□□ -0.56
SNAPC4-201ENST00000298532 RAI1Q7Z5J4 1906 aaPredicted RBP11.57□□□□□ -0.56
SNAPC4-201ENST00000298532 H0Y9P7 68 aa11.57□□□□□ -0.56
SNAPC4-201ENST00000298532 USP9XQ93008 2570 aaPredicted RBP11.56□□□□□ -0.56
SNAPC4-201ENST00000298532 hDV103S1A0JD37 113 aa11.56□□□□□ -0.56
SNAPC4-201ENST00000298532 HCG22E2RYF7 251 aa11.56□□□□□ -0.56
SNAPC4-201ENST00000298532 A0A087WSZ3 146 aa11.55□□□□□ -0.56
SNAPC4-201ENST00000298532 C4orf26Q17RF5 130 aa11.55□□□□□ -0.56
SNAPC4-201ENST00000298532 C7orf33Q8WU49 177 aa11.55□□□□□ -0.56
SNAPC4-201ENST00000298532 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
SNAPC4-201ENST00000298532 FN1P02751 2386 aaKnown RBP11.52□□□□□ -0.56
SNAPC4-201ENST00000298532 FASNP49327 2511 aaKnown RBP11.52□□□□□ -0.56
SNAPC4-201ENST00000298532 PCOTHQ58A44 107 aa11.52□□□□□ -0.56
SNAPC4-201ENST00000298532 TLN2Q9Y4G6 2542 aa11.52□□□□□ -0.57
SNAPC4-201ENST00000298532 ZFYVE26Q68DK2 2539 aa11.52□□□□□ -0.57
SNAPC4-201ENST00000298532 Q9BRP9 147 aa11.51□□□□□ -0.57
SNAPC4-201ENST00000298532 RETNQ9HD89 108 aa11.51□□□□□ -0.57
SNAPC4-201ENST00000298532 PTPRBP23467 1997 aa11.51□□□□□ -0.57
SNAPC4-201ENST00000298532 JMJD1CQ15652 2540 aa11.5□□□□□ -0.57
SNAPC4-201ENST00000298532 LIMD2Q9BT23 127 aa11.5□□□□□ -0.57
SNAPC4-201ENST00000298532 SETD2Q9BYW2 2564 aaPredicted RBP11.49□□□□□ -0.57
SNAPC4-201ENST00000298532 ABCA12Q86UK0 2595 aa11.49□□□□□ -0.57
SNAPC4-201ENST00000298532 SMIM29Q86T20 159 aa11.48□□□□□ -0.57
SNAPC4-201ENST00000298532 IGHV6-1A0A0B4J1U7 121 aa11.48□□□□□ -0.57
SNAPC4-201ENST00000298532 LY6G6CO95867 125 aa11.47□□□□□ -0.57
SNAPC4-201ENST00000298532 Q6ZRU5 148 aa11.47□□□□□ -0.57
SNAPC4-201ENST00000298532 DEFB116Q30KQ4 102 aa11.47□□□□□ -0.57
SNAPC4-201ENST00000298532 LYPD5Q6UWN5 251 aa11.46□□□□□ -0.58
SNAPC4-201ENST00000298532 USP9YO00507 2555 aaPredicted RBP11.45□□□□□ -0.58
SNAPC4-201ENST00000298532 Q6ZQT0 140 aa11.45□□□□□ -0.58
SNAPC4-201ENST00000298532 PKD1L2Q7Z442 2459 aa11.45□□□□□ -0.58
SNAPC4-201ENST00000298532 LITAFQ99732 161 aa11.45□□□□□ -0.58
SNAPC4-201ENST00000298532 LOC110117498A0A087WWA1 95 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms