RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 PF4P02776 101 aa11.75□□□□□ -0.53
CHRNE-201ENST00000293780 A0A087WYN8 130 aa11.74□□□□□ -0.53
CHRNE-201ENST00000293780 FAM222AQ5U5X8 452 aa11.74□□□□□ -0.53
CHRNE-201ENST00000293780 NOTCH2Q04721 2471 aa11.74□□□□□ -0.53
CHRNE-201ENST00000293780 CFAP161Q6P656 301 aa11.74□□□□□ -0.53
CHRNE-201ENST00000293780 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
CHRNE-201ENST00000293780 LINC00643Q86TS7 51 aa11.73□□□□□ -0.53
CHRNE-201ENST00000293780 MALP21145 153 aa11.72□□□□□ -0.53
CHRNE-201ENST00000293780 GYPEP15421 78 aa11.71□□□□□ -0.53
CHRNE-201ENST00000293780 A0A096LPF7 62 aa11.71□□□□□ -0.53
CHRNE-201ENST00000293780 IBA57-AS1B1ANH7 110 aa11.71□□□□□ -0.53
CHRNE-201ENST00000293780 ATP5G1P05496 136 aa11.71□□□□□ -0.53
CHRNE-201ENST00000293780 XCL1P47992 114 aa11.71□□□□□ -0.53
CHRNE-201ENST00000293780 C9orf129Q5T035 196 aaKnown RBP11.71□□□□□ -0.53
CHRNE-201ENST00000293780 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.53
CHRNE-201ENST00000293780 PAX4O43316 350 aa11.69□□□□□ -0.54
CHRNE-201ENST00000293780 C6orf226Q5I0X4 101 aa11.69□□□□□ -0.54
CHRNE-201ENST00000293780 C9orf153Q5TBE3 101 aa11.69□□□□□ -0.54
CHRNE-201ENST00000293780 C3orf22Q8N5N4 141 aa11.69□□□□□ -0.54
CHRNE-201ENST00000293780 GAGE2AQ6NT46 116 aa11.68□□□□□ -0.54
CHRNE-201ENST00000293780 KRTAP10-3P60369 221 aa11.68□□□□□ -0.54
CHRNE-201ENST00000293780 OR13C6PQ8NH95 151 aa11.68□□□□□ -0.54
CHRNE-201ENST00000293780 SDIM1Q6ZPB5 146 aa11.67□□□□□ -0.54
CHRNE-201ENST00000293780 SMR3AQ99954 134 aa11.67□□□□□ -0.54
CHRNE-201ENST00000293780 DNAL4O96015 105 aa11.66□□□□□ -0.54
CHRNE-201ENST00000293780 KIR2DL5BQ8NHK3 375 aa11.66□□□□□ -0.54
CHRNE-201ENST00000293780 UQCRQO14949 82 aa11.66□□□□□ -0.54
CHRNE-201ENST00000293780 LECT2O14960 151 aa11.65□□□□□ -0.54
CHRNE-201ENST00000293780 SLPIP03973 132 aa11.65□□□□□ -0.54
CHRNE-201ENST00000293780 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.54
CHRNE-201ENST00000293780 OTOGQ6ZRI0 2925 aa11.65□□□□□ -0.54
CHRNE-201ENST00000293780 LINC00612Q8N6U2 182 aa11.65□□□□□ -0.54
CHRNE-201ENST00000293780 X6R8D5 127 aa11.65□□□□□ -0.54
CHRNE-201ENST00000293780 SS18Q15532 418 aa11.64□□□□□ -0.55
CHRNE-201ENST00000293780 C14orf132Q9NPU4 83 aa11.64□□□□□ -0.55
CHRNE-201ENST00000293780 VWFP04275 2813 aa11.64□□□□□ -0.55
CHRNE-201ENST00000293780 H0YGX0 51 aa11.63□□□□□ -0.55
CHRNE-201ENST00000293780 CXCL5P42830 114 aa11.63□□□□□ -0.55
CHRNE-201ENST00000293780 HILS1P60008 231 aa11.63□□□□□ -0.55
CHRNE-201ENST00000293780 PRR3P79522 188 aaKnown RBP11.63□□□□□ -0.55
CHRNE-201ENST00000293780 LINC00526Q96FQ7 95 aa11.63□□□□□ -0.55
CHRNE-201ENST00000293780 Q8N3U1 123 aa11.62□□□□□ -0.55
CHRNE-201ENST00000293780 SPATA3Q8NHX4 192 aa11.62□□□□□ -0.55
CHRNE-201ENST00000293780 A0A1B0GUV1 79 aa11.62□□□□□ -0.55
CHRNE-201ENST00000293780 DEFB4AO15263 64 aa11.62□□□□□ -0.55
CHRNE-201ENST00000293780 LINC00482Q8N8I6 264 aa11.61□□□□□ -0.55
CHRNE-201ENST00000293780 PRO0255Q9UI72 69 aa11.61□□□□□ -0.55
CHRNE-201ENST00000293780 Q8IZM0 81 aa11.6□□□□□ -0.55
CHRNE-201ENST00000293780 NCR3O14931 201 aa11.6□□□□□ -0.55
CHRNE-201ENST00000293780 LINC00269Q8N2A0 174 aa11.6□□□□□ -0.55
CHRNE-201ENST00000293780 KLK5Q9Y337 293 aaPredicted RBP11.6□□□□□ -0.55
CHRNE-201ENST00000293780 FLNBO75369 2602 aaKnown RBP11.59□□□□□ -0.55
CHRNE-201ENST00000293780 IGLV10-54A0A075B6I4 117 aa11.59□□□□□ -0.55
CHRNE-201ENST00000293780 LY6G6DO95868 133 aa11.59□□□□□ -0.55
CHRNE-201ENST00000293780 COX7CP15954 63 aa11.59□□□□□ -0.55
CHRNE-201ENST00000293780 HIVEP2P31629 2446 aa11.57□□□□□ -0.56
CHRNE-201ENST00000293780 OBSCN-AS1Q96MR7 158 aa11.57□□□□□ -0.56
CHRNE-201ENST00000293780 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
CHRNE-201ENST00000293780 NANOS2P60321 138 aaKnown RBP11.57□□□□□ -0.56
CHRNE-201ENST00000293780 KIAA0087Q14695 138 aa11.57□□□□□ -0.56
CHRNE-201ENST00000293780 C9orf116Q5BN46 136 aaPredicted RBP11.57□□□□□ -0.56
CHRNE-201ENST00000293780 C2orf48Q96LS8 159 aa11.57□□□□□ -0.56
CHRNE-201ENST00000293780 HIST1H4AP62805 103 aaKnown RBP11.55□□□□□ -0.56
CHRNE-201ENST00000293780 DEFB135Q30KP9 77 aa11.54□□□□□ -0.56
CHRNE-201ENST00000293780 CHCHD10Q8WYQ3 142 aaPredicted RBP11.54□□□□□ -0.56
CHRNE-201ENST00000293780 LINC00846Q9NV44 126 aa11.54□□□□□ -0.56
CHRNE-201ENST00000293780 ATOX1O00244 68 aa11.54□□□□□ -0.56
CHRNE-201ENST00000293780 SMIM9A6NGZ8 99 aa11.53□□□□□ -0.56
CHRNE-201ENST00000293780 ANGP03950 147 aaKnown RBP11.53□□□□□ -0.56
CHRNE-201ENST00000293780 CD164L2Q6UWJ8 174 aa11.53□□□□□ -0.56
CHRNE-201ENST00000293780 CRYGAP11844 174 aa11.52□□□□□ -0.56
CHRNE-201ENST00000293780 Q8NDZ9 215 aa11.52□□□□□ -0.56
CHRNE-201ENST00000293780 ORMDL1Q9P0S3 153 aa11.52□□□□□ -0.56
CHRNE-201ENST00000293780 TRRAPQ9Y4A5 3859 aa11.52□□□□□ -0.56
CHRNE-201ENST00000293780 IGKV3D-7A0A0C4DH55 119 aa11.52□□□□□ -0.57
CHRNE-201ENST00000293780 REG3AQ06141 175 aa11.52□□□□□ -0.57
CHRNE-201ENST00000293780 LINC01561Q8N1V8 128 aa11.51□□□□□ -0.57
CHRNE-201ENST00000293780 hADV29S1A0JD25 119 aa11.51□□□□□ -0.57
CHRNE-201ENST00000293780 LYRM9A8MSI8 78 aa11.5□□□□□ -0.57
CHRNE-201ENST00000293780 J3KT08 172 aa11.5□□□□□ -0.57
CHRNE-201ENST00000293780 RPL18AQ02543 176 aaKnown RBP11.49□□□□□ -0.57
CHRNE-201ENST00000293780 CELA1Q9UNI1 258 aa11.49□□□□□ -0.57
CHRNE-201ENST00000293780 HIVEP1P15822 2718 aa11.49□□□□□ -0.57
CHRNE-201ENST00000293780 IGHV4-28A0A0C4DH34 117 aa11.49□□□□□ -0.57
CHRNE-201ENST00000293780 Q8N814 137 aa11.49□□□□□ -0.57
CHRNE-201ENST00000293780 A0A1B0GX51 115 aa11.48□□□□□ -0.57
CHRNE-201ENST00000293780 C6orf223Q8N319 242 aa11.48□□□□□ -0.57
CHRNE-201ENST00000293780 INAFM1C9JVW0 142 aa11.48□□□□□ -0.57
CHRNE-201ENST00000293780 LINC00167Q96N53 147 aa11.48□□□□□ -0.57
CHRNE-201ENST00000293780 CYSTM1Q9H1C7 97 aa11.48□□□□□ -0.57
CHRNE-201ENST00000293780 DAD1P61803 113 aa11.47□□□□□ -0.57
CHRNE-201ENST00000293780 C10orf25Q5T742 122 aa11.47□□□□□ -0.57
CHRNE-201ENST00000293780 NDUFC2O95298 119 aa11.47□□□□□ -0.57
CHRNE-201ENST00000293780 COX17Q14061 63 aa11.47□□□□□ -0.57
CHRNE-201ENST00000293780 Q6JHZ5 121 aa11.47□□□□□ -0.57
CHRNE-201ENST00000293780 TENM1Q9UKZ4 2725 aa11.47□□□□□ -0.57
CHRNE-201ENST00000293780 BAHCC1Q9P281 2608 aa11.46□□□□□ -0.57
CHRNE-201ENST00000293780 A0A087WVE0 104 aa11.46□□□□□ -0.58
CHRNE-201ENST00000293780 FAM19A5Q7Z5A7 132 aaPredicted RBP11.46□□□□□ -0.58
CHRNE-201ENST00000293780 UNQ6190/PRO20217Q6UXQ8 127 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms