RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 C1orf137Q5JT78 98 aa10.87□□□□□ -0.67
SHROOM4-201ENST00000289292 LINC00575Q6W349 94 aa10.87□□□□□ -0.67
SHROOM4-201ENST00000289292 BEAN1Q3B7T3 259 aa10.86□□□□□ -0.67
SHROOM4-201ENST00000289292 Q6ZVQ6 151 aa10.86□□□□□ -0.67
SHROOM4-201ENST00000289292 MUC6Q6W4X9 2439 aa10.86□□□□□ -0.67
SHROOM4-201ENST00000289292 SPG11Q96JI7 2443 aa10.86□□□□□ -0.67
SHROOM4-201ENST00000289292 Q8N2B8 174 aa10.85□□□□□ -0.67
SHROOM4-201ENST00000289292 WDR87Q6ZQQ6 2873 aa10.85□□□□□ -0.67
SHROOM4-201ENST00000289292 LINC01547P58512 204 aaPredicted RBP10.85□□□□□ -0.67
SHROOM4-201ENST00000289292 BRI3O95415 125 aa10.84□□□□□ -0.67
SHROOM4-201ENST00000289292 PCOTHQ58A44 107 aa10.84□□□□□ -0.67
SHROOM4-201ENST00000289292 PTPRBP23467 1997 aa10.83□□□□□ -0.68
SHROOM4-201ENST00000289292 TMEM254Q8TBM7 123 aa10.83□□□□□ -0.68
SHROOM4-201ENST00000289292 AGRNO00468 2067 aa10.83□□□□□ -0.68
SHROOM4-201ENST00000289292 ESRGQ1W209 222 aa10.83□□□□□ -0.68
SHROOM4-201ENST00000289292 RETNLBQ9BQ08 111 aa10.83□□□□□ -0.68
SHROOM4-201ENST00000289292 FAM218AQ96MZ4 157 aa10.82□□□□□ -0.68
SHROOM4-201ENST00000289292 C10orf25Q5T742 122 aa10.81□□□□□ -0.68
SHROOM4-201ENST00000289292 REG3GQ6UW15 175 aa10.81□□□□□ -0.68
SHROOM4-201ENST00000289292 IGLV1-51P01701 117 aa10.81□□□□□ -0.68
SHROOM4-201ENST00000289292 Q9UF83 564 aa10.81□□□□□ -0.68
SHROOM4-201ENST00000289292 LINC00315P59091 139 aa10.81□□□□□ -0.68
SHROOM4-201ENST00000289292 K7ERS5 55 aa10.8□□□□□ -0.68
SHROOM4-201ENST00000289292 EGFEM1PQ0D2K5 195 aa10.8□□□□□ -0.68
SHROOM4-201ENST00000289292 CSPG4Q6UVK1 2322 aa10.8□□□□□ -0.68
SHROOM4-201ENST00000289292 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
SHROOM4-201ENST00000289292 Q6ZTC4 211 aa10.78□□□□□ -0.68
SHROOM4-201ENST00000289292 CENPFP49454 3210 aa10.78□□□□□ -0.68
SHROOM4-201ENST00000289292 HIVEP2P31629 2446 aa10.77□□□□□ -0.68
SHROOM4-201ENST00000289292 IGHV6-1A0A0B4J1U7 121 aa10.76□□□□□ -0.69
SHROOM4-201ENST00000289292 CRYGAP11844 174 aa10.76□□□□□ -0.69
SHROOM4-201ENST00000289292 C11orf72Q8NBR9 251 aa10.76□□□□□ -0.69
SHROOM4-201ENST00000289292 MUC7Q8TAX7 377 aa10.76□□□□□ -0.69
SHROOM4-201ENST00000289292 BDP1A6H8Y1 2624 aa10.76□□□□□ -0.69
SHROOM4-201ENST00000289292 H0Y9P7 68 aa10.76□□□□□ -0.69
SHROOM4-201ENST00000289292 PRO0628Q9UI54 55 aa10.76□□□□□ -0.69
SHROOM4-201ENST00000289292 FAM19A4Q96LR4 140 aa10.75□□□□□ -0.69
SHROOM4-201ENST00000289292 Q6ZRU5 148 aa10.75□□□□□ -0.69
SHROOM4-201ENST00000289292 OTOGLQ3ZCN5 2332 aa10.74□□□□□ -0.69
SHROOM4-201ENST00000289292 IGLV5-39A0A0G2JS06 123 aa10.74□□□□□ -0.69
SHROOM4-201ENST00000289292 ZNF706Q9Y5V0 76 aaPredicted RBP10.74□□□□□ -0.69
SHROOM4-201ENST00000289292 COL27A1Q8IZC6 1860 aaPredicted RBP10.74□□□□□ -0.69
SHROOM4-201ENST00000289292 A0A087WSZ3 146 aa10.73□□□□□ -0.69
SHROOM4-201ENST00000289292 SMIM29Q86T20 159 aa10.73□□□□□ -0.69
SHROOM4-201ENST00000289292 Q9BRP9 147 aa10.73□□□□□ -0.69
SHROOM4-201ENST00000289292 C7orf33Q8WU49 177 aa10.72□□□□□ -0.69
SHROOM4-201ENST00000289292 PIEZO2Q9H5I5 2752 aa10.72□□□□□ -0.69
SHROOM4-201ENST00000289292 CIRBP-AS1Q8TBR5 109 aa10.72□□□□□ -0.69
SHROOM4-201ENST00000289292 LYPD5Q6UWN5 251 aa10.72□□□□□ -0.69
SHROOM4-201ENST00000289292 A0A1B0GUV1 79 aa10.71□□□□□ -0.69
SHROOM4-201ENST00000289292 PTPN13Q12923 2485 aa10.7□□□□□ -0.7
SHROOM4-201ENST00000289292 DNAH12Q6ZR08 3092 aa10.7□□□□□ -0.7
SHROOM4-201ENST00000289292 IL17DQ8TAD2 202 aa10.7□□□□□ -0.7
SHROOM4-201ENST00000289292 HCG22E2RYF7 251 aa10.7□□□□□ -0.7
SHROOM4-201ENST00000289292 CXCL6P80162 114 aa10.69□□□□□ -0.7
SHROOM4-201ENST00000289292 PRLHP81277 87 aa10.69□□□□□ -0.7
SHROOM4-201ENST00000289292 SPATA3Q8NHX4 192 aa10.69□□□□□ -0.7
SHROOM4-201ENST00000289292 SBSPONQ8IVN8 264 aa10.69□□□□□ -0.7
SHROOM4-201ENST00000289292 LY6G6CO95867 125 aa10.67□□□□□ -0.7
SHROOM4-201ENST00000289292 KIAA0087Q14695 138 aa10.67□□□□□ -0.7
SHROOM4-201ENST00000289292 SMCR5Q8TEV8 140 aa10.67□□□□□ -0.7
SHROOM4-201ENST00000289292 TTC28Q96AY4 2481 aa10.66□□□□□ -0.7
SHROOM4-201ENST00000289292 CUL9Q8IWT3 2517 aa10.66□□□□□ -0.7
SHROOM4-201ENST00000289292 UTRNP46939 3433 aa10.66□□□□□ -0.7
SHROOM4-201ENST00000289292 FHL3Q13643 280 aa10.66□□□□□ -0.7
SHROOM4-201ENST00000289292 IGHV3OR16-9A0A0B4J2B5 98 aa10.65□□□□□ -0.7
SHROOM4-201ENST00000289292 HIVEP3Q5T1R4 2406 aa10.64□□□□□ -0.71
SHROOM4-201ENST00000289292 SPINK1P00995 79 aa10.63□□□□□ -0.71
SHROOM4-201ENST00000289292 LINC01556Q5JQF7 62 aa10.63□□□□□ -0.71
SHROOM4-201ENST00000289292 C16orf95Q9H693 158 aa10.63□□□□□ -0.71
SHROOM4-201ENST00000289292 LINC00474Q9P2X8 69 aa10.63□□□□□ -0.71
SHROOM4-201ENST00000289292 C2CD3Q4AC94 2353 aa10.63□□□□□ -0.71
SHROOM4-201ENST00000289292 RPS28P62857 69 aaKnown RBP10.62□□□□□ -0.71
SHROOM4-201ENST00000289292 PCSK5Q92824 1860 aa10.62□□□□□ -0.71
SHROOM4-201ENST00000289292 C1orf64Q8NEQ6 169 aa10.61□□□□□ -0.71
SHROOM4-201ENST00000289292 LINC01561Q8N1V8 128 aa10.61□□□□□ -0.71
SHROOM4-201ENST00000289292 C22orf24Q9Y442 160 aa10.61□□□□□ -0.71
SHROOM4-201ENST00000289292 IGLV5-45A0A087WSX0 123 aa10.6□□□□□ -0.71
SHROOM4-201ENST00000289292 C2orf48Q96LS8 159 aa10.6□□□□□ -0.71
SHROOM4-201ENST00000289292 C6orf48Q9UBA6 75 aa10.6□□□□□ -0.71
SHROOM4-201ENST00000289292 TM2D3Q9BRN9 247 aa10.6□□□□□ -0.71
SHROOM4-201ENST00000289292 LITAFQ99732 161 aa10.59□□□□□ -0.71
SHROOM4-201ENST00000289292 COL4A2P08572 1712 aa10.58□□□□□ -0.71
SHROOM4-201ENST00000289292 hDV103S1A0JD37 113 aa10.57□□□□□ -0.72
SHROOM4-201ENST00000289292 Q6ZQT0 140 aa10.57□□□□□ -0.72
SHROOM4-201ENST00000289292 ACACBO00763 2458 aa10.57□□□□□ -0.72
SHROOM4-201ENST00000289292 X6R8D5 127 aa10.55□□□□□ -0.72
SHROOM4-201ENST00000289292 IGLV5-52A0A0A0MRZ9 124 aa10.53□□□□□ -0.72
SHROOM4-201ENST00000289292 LIMD2Q9BT23 127 aa10.53□□□□□ -0.72
SHROOM4-201ENST00000289292 SPAG11AQ6PDA7 123 aa10.52□□□□□ -0.73
SHROOM4-201ENST00000289292 EIF4EBP3O60516 100 aaPredicted RBP10.51□□□□□ -0.73
SHROOM4-201ENST00000289292 FSHBP01225 129 aa10.51□□□□□ -0.73
SHROOM4-201ENST00000289292 LINC00167Q96N53 147 aa10.51□□□□□ -0.73
SHROOM4-201ENST00000289292 ELOF1P60002 83 aaKnown RBP10.51□□□□□ -0.73
SHROOM4-201ENST00000289292 NHLRC4P0CG21 123 aaPredicted RBP10.51□□□□□ -0.73
SHROOM4-201ENST00000289292 ATRXP46100 2492 aa10.5□□□□□ -0.73
SHROOM4-201ENST00000289292 ST20-AS1Q8NBB2 130 aa10.49□□□□□ -0.73
SHROOM4-201ENST00000289292 RPL37AP61513 92 aaKnown RBP10.49□□□□□ -0.73
SHROOM4-201ENST00000289292 F8WDY8 70 aa10.48□□□□□ -0.73
SHROOM4-201ENST00000289292 IGF2RP11717 2491 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms