RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 LINC01561Q8N1V8 128 aa9.61□□□□□ -0.87
PDE6D-201ENST00000287600 CDKN2A-AS1Q9UH64 79 aa9.61□□□□□ -0.87
PDE6D-201ENST00000287600 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
PDE6D-201ENST00000287600 F8WDY8 70 aa9.6□□□□□ -0.87
PDE6D-201ENST00000287600 NDUFA1O15239 70 aa9.6□□□□□ -0.87
PDE6D-201ENST00000287600 TRGC2P03986 189 aa9.6□□□□□ -0.87
PDE6D-201ENST00000287600 GAGE2BQ13066 116 aa9.6□□□□□ -0.87
PDE6D-201ENST00000287600 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
PDE6D-201ENST00000287600 LINC00474Q9P2X8 69 aa9.6□□□□□ -0.87
PDE6D-201ENST00000287600 NDUFA6P56556 154 aa9.59□□□□□ -0.87
PDE6D-201ENST00000287600 C10orf25Q5T742 122 aa9.59□□□□□ -0.87
PDE6D-201ENST00000287600 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
PDE6D-201ENST00000287600 LINC00469Q8N7U9 141 aa9.59□□□□□ -0.87
PDE6D-201ENST00000287600 STPG4Q8N801 248 aa9.59□□□□□ -0.87
PDE6D-201ENST00000287600 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
PDE6D-201ENST00000287600 PACRGQ96M98 296 aaPredicted RBP9.59□□□□□ -0.87
PDE6D-201ENST00000287600 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
PDE6D-201ENST00000287600 PLAC8Q9NZF1 115 aa9.59□□□□□ -0.87
PDE6D-201ENST00000287600 TINCRA0A1B0GVN0 87 aa9.58□□□□□ -0.88
PDE6D-201ENST00000287600 COLCA2A8K830 154 aa9.58□□□□□ -0.88
PDE6D-201ENST00000287600 RNF151Q2KHN1 245 aa9.58□□□□□ -0.88
PDE6D-201ENST00000287600 PDZD11Q5EBL8 140 aa9.58□□□□□ -0.88
PDE6D-201ENST00000287600 CHCHD1Q96BP2 118 aaKnown RBP9.58□□□□□ -0.88
PDE6D-201ENST00000287600 KRTAP4-8Q9BYQ9 185 aa9.58□□□□□ -0.88
PDE6D-201ENST00000287600 TOMM7Q9P0U1 55 aa9.58□□□□□ -0.88
PDE6D-201ENST00000287600 PRSS2P07478 247 aa9.57□□□□□ -0.88
PDE6D-201ENST00000287600 PTTG1IPP53801 180 aa9.57□□□□□ -0.88
PDE6D-201ENST00000287600 RPL18AQ02543 176 aaKnown RBP9.57□□□□□ -0.88
PDE6D-201ENST00000287600 C2orf82Q6UX34 121 aa9.57□□□□□ -0.88
PDE6D-201ENST00000287600 BAGE3Q86Y29 109 aa9.57□□□□□ -0.88
PDE6D-201ENST00000287600 ATP5LO75964 103 aa9.56□□□□□ -0.88
PDE6D-201ENST00000287600 C6orf226Q5I0X4 101 aa9.56□□□□□ -0.88
PDE6D-201ENST00000287600 C6orf48Q9UBA6 75 aa9.56□□□□□ -0.88
PDE6D-201ENST00000287600 SCO1O75880 301 aa9.55□□□□□ -0.88
PDE6D-201ENST00000287600 CKS1BP61024 79 aa9.55□□□□□ -0.88
PDE6D-201ENST00000287600 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
PDE6D-201ENST00000287600 HSBP1O75506 76 aa9.54□□□□□ -0.88
PDE6D-201ENST00000287600 Q8IZM0 81 aa9.54□□□□□ -0.88
PDE6D-201ENST00000287600 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
PDE6D-201ENST00000287600 SMIM1B2RUZ4 78 aa9.53□□□□□ -0.88
PDE6D-201ENST00000287600 SPINK8P0C7L1 97 aa9.52□□□□□ -0.89
PDE6D-201ENST00000287600 IGLC3P0DOY3 106 aa9.52□□□□□ -0.89
PDE6D-201ENST00000287600 FAM19A2Q8N3H0 131 aa9.52□□□□□ -0.89
PDE6D-201ENST00000287600 H3BRM9 83 aa9.51□□□□□ -0.89
PDE6D-201ENST00000287600 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
PDE6D-201ENST00000287600 PRR3P79522 188 aaKnown RBP9.51□□□□□ -0.89
PDE6D-201ENST00000287600 GAGE2EQ4V326 116 aa9.51□□□□□ -0.89
PDE6D-201ENST00000287600 C9orf116Q5BN46 136 aaPredicted RBP9.51□□□□□ -0.89
PDE6D-201ENST00000287600 Q6ZRP5 223 aa9.51□□□□□ -0.89
PDE6D-201ENST00000287600 GAGE2DQ9UEU5 116 aa9.51□□□□□ -0.89
PDE6D-201ENST00000287600 A0A1W2PNN7 141 aa9.5□□□□□ -0.89
PDE6D-201ENST00000287600 COX7B2Q8TF08 81 aa9.5□□□□□ -0.89
PDE6D-201ENST00000287600 F8VRH5 84 aa9.49□□□□□ -0.89
PDE6D-201ENST00000287600 SERF1AO75920 110 aa9.49□□□□□ -0.89
PDE6D-201ENST00000287600 IFI27L1Q96BM0 104 aa9.49□□□□□ -0.89
PDE6D-201ENST00000287600 TNXBP22105 4242 aa9.49□□□□□ -0.89
PDE6D-201ENST00000287600 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
PDE6D-201ENST00000287600 ZNF22P17026 224 aaPredicted RBP9.48□□□□□ -0.89
PDE6D-201ENST00000287600 CXCL5P42830 114 aa9.48□□□□□ -0.89
PDE6D-201ENST00000287600 LINC00310P59036 64 aa9.48□□□□□ -0.89
PDE6D-201ENST00000287600 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
PDE6D-201ENST00000287600 C11orf86A6NJI1 115 aa9.47□□□□□ -0.89
PDE6D-201ENST00000287600 TRAV12-1A0A0B4J245 112 aa9.46□□□□□ -0.9
PDE6D-201ENST00000287600 NUPR1O60356 82 aa9.46□□□□□ -0.9
PDE6D-201ENST00000287600 TMEM170BQ5T4T1 132 aa9.46□□□□□ -0.9
PDE6D-201ENST00000287600 LINC01600Q96MT4 127 aa9.46□□□□□ -0.9
PDE6D-201ENST00000287600 FAM168BA1KXE4 195 aa9.45□□□□□ -0.9
PDE6D-201ENST00000287600 LEPROTL1O95214 131 aa9.45□□□□□ -0.9
PDE6D-201ENST00000287600 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
PDE6D-201ENST00000287600 FAM19A5Q7Z5A7 132 aaPredicted RBP9.44□□□□□ -0.9
PDE6D-201ENST00000287600 H0Y8G0 127 aa9.43□□□□□ -0.9
PDE6D-201ENST00000287600 FABP4P15090 132 aa9.43□□□□□ -0.9
PDE6D-201ENST00000287600 C9orf129Q5T035 196 aaKnown RBP9.43□□□□□ -0.9
PDE6D-201ENST00000287600 PHF5AQ7RTV0 110 aaKnown RBP9.43□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BKO60814 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BJP06899 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BOP23527 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BBP33778 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BDP58876 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BCP62807 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 ODF1Q14990 250 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
PDE6D-201ENST00000287600 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 SPINK6Q6UWN8 80 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 KRTAP9-2Q9BYQ4 174 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
PDE6D-201ENST00000287600 LRP2P98164 4655 aa9.41□□□□□ -0.9
PDE6D-201ENST00000287600 HSPB8Q9UJY1 196 aa9.41□□□□□ -0.9
PDE6D-201ENST00000287600 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.4□□□□□ -0.9
PDE6D-201ENST00000287600 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
PDE6D-201ENST00000287600 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
PDE6D-201ENST00000287600 H3BS24 57 aa9.38□□□□□ -0.91
PDE6D-201ENST00000287600 M0QXV9 152 aa9.38□□□□□ -0.91
PDE6D-201ENST00000287600 RNF213Q63HN8 5207 aa9.38□□□□□ -0.91
PDE6D-201ENST00000287600 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
PDE6D-201ENST00000287600 PFN2P35080 140 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms