RNA–Protein interactions for RNA: ENST00000286307.5

LSM11-201, Transcript of LSM11, U7 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM11, Length 6,584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11-201ENST00000286307 FAM236CP0DP71 79 aa13.58□□□□□ -0.23
LSM11-201ENST00000286307 TLN2Q9Y4G6 2542 aa13.58□□□□□ -0.24
LSM11-201ENST00000286307 CNFNQ9BYD5 112 aa13.57□□□□□ -0.24
LSM11-201ENST00000286307 RETNLBQ9BQ08 111 aa13.56□□□□□ -0.24
LSM11-201ENST00000286307 IGIPA6NJ69 53 aa13.56□□□□□ -0.24
LSM11-201ENST00000286307 SMIM1B2RUZ4 78 aa13.56□□□□□ -0.24
LSM11-201ENST00000286307 Q6ZRU5 148 aa13.55□□□□□ -0.24
LSM11-201ENST00000286307 COL27A1Q8IZC6 1860 aaPredicted RBP13.55□□□□□ -0.24
LSM11-201ENST00000286307 NDUFV3P56181 108 aaKnown RBP13.54□□□□□ -0.24
LSM11-201ENST00000286307 LST1O00453 97 aa13.54□□□□□ -0.24
LSM11-201ENST00000286307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.54□□□□□ -0.24
LSM11-201ENST00000286307 LINC00337Q8N6G1 96 aa13.54□□□□□ -0.24
LSM11-201ENST00000286307 FASNP49327 2511 aaKnown RBP13.54□□□□□ -0.24
LSM11-201ENST00000286307 A0A1B0GUV1 79 aa13.53□□□□□ -0.24
LSM11-201ENST00000286307 C2orf48Q96LS8 159 aa13.53□□□□□ -0.24
LSM11-201ENST00000286307 Q9BRP9 147 aa13.53□□□□□ -0.24
LSM11-201ENST00000286307 LINC00643Q86TS7 51 aa13.51□□□□□ -0.25
LSM11-201ENST00000286307 C2CD3Q4AC94 2353 aa13.5□□□□□ -0.25
LSM11-201ENST00000286307 F8WDY8 70 aa13.5□□□□□ -0.25
LSM11-201ENST00000286307 PRLHP81277 87 aa13.5□□□□□ -0.25
LSM11-201ENST00000286307 C3orf22Q8N5N4 141 aa13.49□□□□□ -0.25
LSM11-201ENST00000286307 IGHV6-1A0A0B4J1U7 121 aa13.49□□□□□ -0.25
LSM11-201ENST00000286307 LINC00315P59091 139 aa13.49□□□□□ -0.25
LSM11-201ENST00000286307 Q6ZVQ6 151 aa13.48□□□□□ -0.25
LSM11-201ENST00000286307 CSDC2Q9Y534 153 aaKnown RBP13.46□□□□□ -0.25
LSM11-201ENST00000286307 J3QL48 77 aa13.46□□□□□ -0.25
LSM11-201ENST00000286307 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.25
LSM11-201ENST00000286307 NBDYA0A0U1RRE5 68 aa13.46□□□□□ -0.26
LSM11-201ENST00000286307 B5MCH6 92 aa13.46□□□□□ -0.26
LSM11-201ENST00000286307 RTL8CO15255 209 aa13.46□□□□□ -0.26
LSM11-201ENST00000286307 C11orf72Q8NBR9 251 aa13.45□□□□□ -0.26
LSM11-201ENST00000286307 C22orf24Q9Y442 160 aa13.44□□□□□ -0.26
LSM11-201ENST00000286307 PRYO14603 147 aa13.44□□□□□ -0.26
LSM11-201ENST00000286307 X6R8D5 127 aa13.44□□□□□ -0.26
LSM11-201ENST00000286307 PCSK5Q92824 1860 aa13.43□□□□□ -0.26
LSM11-201ENST00000286307 FAM19A3Q7Z5A8 133 aa13.41□□□□□ -0.26
LSM11-201ENST00000286307 LIMD2Q9BT23 127 aa13.41□□□□□ -0.26
LSM11-201ENST00000286307 FAM30AQ9NZY2 134 aa13.4□□□□□ -0.26
LSM11-201ENST00000286307 AMELXQ99217 191 aa13.39□□□□□ -0.27
LSM11-201ENST00000286307 ATP5EP2Q5VTU8 51 aa13.38□□□□□ -0.27
LSM11-201ENST00000286307 ANKRD17O75179 2603 aaKnown RBP13.38□□□□□ -0.27
LSM11-201ENST00000286307 Q8N814 137 aa13.38□□□□□ -0.27
LSM11-201ENST00000286307 SPATA3Q8NHX4 192 aa13.38□□□□□ -0.27
LSM11-201ENST00000286307 C20orf197Q8N268 126 aa13.37□□□□□ -0.27
LSM11-201ENST00000286307 LINC00588Q9Y4M8 146 aa13.37□□□□□ -0.27
LSM11-201ENST00000286307 Q6JHZ5 121 aa13.37□□□□□ -0.27
LSM11-201ENST00000286307 SMCR5Q8TEV8 140 aa13.37□□□□□ -0.27
LSM11-201ENST00000286307 K7EIL1 84 aa13.36□□□□□ -0.27
LSM11-201ENST00000286307 KRTAP10-11P60412 298 aa13.36□□□□□ -0.27
LSM11-201ENST00000286307 SPACA4Q8TDM5 124 aa13.36□□□□□ -0.27
LSM11-201ENST00000286307 K7ERS5 55 aa13.36□□□□□ -0.27
LSM11-201ENST00000286307 UTRNP46939 3433 aa13.35□□□□□ -0.27
LSM11-201ENST00000286307 Q8NAQ8 132 aa13.35□□□□□ -0.27
LSM11-201ENST00000286307 A8MTW9 85 aa13.35□□□□□ -0.27
LSM11-201ENST00000286307 Q8N9L7 120 aa13.35□□□□□ -0.27
LSM11-201ENST00000286307 DEFB116Q30KQ4 102 aa13.35□□□□□ -0.27
LSM11-201ENST00000286307 TSPEAR-AS2P59090 65 aa13.34□□□□□ -0.27
LSM11-201ENST00000286307 COX8CQ7Z4L0 72 aa13.34□□□□□ -0.27
LSM11-201ENST00000286307 SERP1Q9Y6X1 66 aa13.34□□□□□ -0.27
LSM11-201ENST00000286307 CHTF8P0CG12 524 aa13.34□□□□□ -0.27
LSM11-201ENST00000286307 H3BNG1 76 aa13.34□□□□□ -0.27
LSM11-201ENST00000286307 NTM-AS1Q6ZSK4 140 aa13.34□□□□□ -0.27
LSM11-201ENST00000286307 A0A087WYN8 130 aa13.33□□□□□ -0.28
LSM11-201ENST00000286307 Q6Q795 121 aa13.33□□□□□ -0.28
LSM11-201ENST00000286307 PLA2G1BP04054 148 aaKnown RBP13.32□□□□□ -0.28
LSM11-201ENST00000286307 A0A087WSZ3 146 aa13.32□□□□□ -0.28
LSM11-201ENST00000286307 Q8N3U1 123 aa13.32□□□□□ -0.28
LSM11-201ENST00000286307 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
LSM11-201ENST00000286307 LINC01561Q8N1V8 128 aa13.31□□□□□ -0.28
LSM11-201ENST00000286307 PRR4Q16378 134 aa13.31□□□□□ -0.28
LSM11-201ENST00000286307 PHF5AQ7RTV0 110 aaKnown RBP13.31□□□□□ -0.28
LSM11-201ENST00000286307 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
LSM11-201ENST00000286307 SETD2Q9BYW2 2564 aaPredicted RBP13.3□□□□□ -0.28
LSM11-201ENST00000286307 USP9YO00507 2555 aaPredicted RBP13.28□□□□□ -0.28
LSM11-201ENST00000286307 MOBPQ13875 183 aa13.28□□□□□ -0.28
LSM11-201ENST00000286307 C2orf91Q6ZV80 131 aa13.28□□□□□ -0.28
LSM11-201ENST00000286307 PKD1L2Q7Z442 2459 aa13.28□□□□□ -0.28
LSM11-201ENST00000286307 POLQO75417 2590 aa13.27□□□□□ -0.28
LSM11-201ENST00000286307 PRR15LQ9BU68 103 aa13.27□□□□□ -0.29
LSM11-201ENST00000286307 MPLKIPQ8TAP9 179 aa13.26□□□□□ -0.29
LSM11-201ENST00000286307 SNURFQ9Y675 71 aa13.26□□□□□ -0.29
LSM11-201ENST00000286307 SPTSSBQ8NFR3 76 aa13.26□□□□□ -0.29
LSM11-201ENST00000286307 F8P00451 2351 aa13.26□□□□□ -0.29
LSM11-201ENST00000286307 NDUFC2O95298 119 aa13.25□□□□□ -0.29
LSM11-201ENST00000286307 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
LSM11-201ENST00000286307 LINC00167Q96N53 147 aa13.25□□□□□ -0.29
LSM11-201ENST00000286307 TYMSOSQ8TAI1 123 aa13.25□□□□□ -0.29
LSM11-201ENST00000286307 Q6ZRP5 223 aa13.24□□□□□ -0.29
LSM11-201ENST00000286307 RPL37AP61513 92 aaKnown RBP13.24□□□□□ -0.29
LSM11-201ENST00000286307 ACANP16112 2415 aa13.24□□□□□ -0.29
LSM11-201ENST00000286307 KRTAP10-3P60369 221 aa13.24□□□□□ -0.29
LSM11-201ENST00000286307 FAM19A4Q96LR4 140 aa13.23□□□□□ -0.29
LSM11-201ENST00000286307 KIF25-AS1Q9Y6Z4 181 aa13.23□□□□□ -0.29
LSM11-201ENST00000286307 MT-ATP8P03928 68 aa13.23□□□□□ -0.29
LSM11-201ENST00000286307 C6orf48Q9UBA6 75 aa13.23□□□□□ -0.29
LSM11-201ENST00000286307 LINC01547P58512 204 aaPredicted RBP13.22□□□□□ -0.29
LSM11-201ENST00000286307 MTORP42345 2549 aa13.21□□□□□ -0.3
LSM11-201ENST00000286307 LINC00575Q6W349 94 aa13.21□□□□□ -0.3
LSM11-201ENST00000286307 SPINK1P00995 79 aa13.2□□□□□ -0.3
LSM11-201ENST00000286307 MUC4Q99102 2169 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms