RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
MRPS28-201ENST00000276585 TOMM6Q96B49 74 aa7.55□□□□□ -1.2
MRPS28-201ENST00000276585 TIMM17AQ99595 171 aa7.55□□□□□ -1.2
MRPS28-201ENST00000276585 C2orf88Q9BSF0 95 aa7.55□□□□□ -1.2
MRPS28-201ENST00000276585 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
MRPS28-201ENST00000276585 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
MRPS28-201ENST00000276585 SRSF9Q13242 221 aaKnown RBP eCLIP7.54□□□□□ -1.2
MRPS28-201ENST00000276585 Q6ZN92 141 aa7.54□□□□□ -1.2
MRPS28-201ENST00000276585 VCX2Q9H322 139 aa7.54□□□□□ -1.2
MRPS28-201ENST00000276585 RHEBQ15382 184 aa7.53□□□□□ -1.2
MRPS28-201ENST00000276585 PHF5AQ7RTV0 110 aaKnown RBP7.53□□□□□ -1.2
MRPS28-201ENST00000276585 KRTAP11-1Q8IUC1 163 aa7.53□□□□□ -1.2
MRPS28-201ENST00000276585 S100PP25815 95 aa7.52□□□□□ -1.21
MRPS28-201ENST00000276585 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
MRPS28-201ENST00000276585 RPS10P5Q9NQ39 176 aa7.52□□□□□ -1.21
MRPS28-201ENST00000276585 CDKN2A-AS1Q9UH64 79 aa7.52□□□□□ -1.21
MRPS28-201ENST00000276585 PSORS1C2Q9UIG4 136 aa7.52□□□□□ -1.21
MRPS28-201ENST00000276585 TRBV30A0A0K0K1B3 111 aa7.51□□□□□ -1.21
MRPS28-201ENST00000276585 MT-ND6P03923 174 aa7.51□□□□□ -1.21
MRPS28-201ENST00000276585 ERASQ7Z444 233 aa7.51□□□□□ -1.21
MRPS28-201ENST00000276585 URB1-AS1Q96HZ7 61 aa7.51□□□□□ -1.21
MRPS28-201ENST00000276585 A0A096LNJ9 63 aa7.5□□□□□ -1.21
MRPS28-201ENST00000276585 COX19Q49B96 90 aa7.5□□□□□ -1.21
MRPS28-201ENST00000276585 C9orf129Q5T035 196 aaKnown RBP7.5□□□□□ -1.21
MRPS28-201ENST00000276585 SPINK6Q6UWN8 80 aa7.5□□□□□ -1.21
MRPS28-201ENST00000276585 SCGB3A1Q96QR1 104 aa7.5□□□□□ -1.21
MRPS28-201ENST00000276585 IGLV5-45A0A087WSX0 123 aa7.49□□□□□ -1.21
MRPS28-201ENST00000276585 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
MRPS28-201ENST00000276585 HERVK_113P63121 156 aa7.49□□□□□ -1.21
MRPS28-201ENST00000276585 FABP9Q0Z7S8 132 aa7.49□□□□□ -1.21
MRPS28-201ENST00000276585 GAGE2EQ4V326 116 aa7.49□□□□□ -1.21
MRPS28-201ENST00000276585 Q8IZM0 81 aa7.49□□□□□ -1.21
MRPS28-201ENST00000276585 GAGE2DQ9UEU5 116 aa7.49□□□□□ -1.21
MRPS28-201ENST00000276585 SMIM1B2RUZ4 78 aa7.48□□□□□ -1.21
MRPS28-201ENST00000276585 G0S2P27469 103 aa7.48□□□□□ -1.21
MRPS28-201ENST00000276585 PRR4Q16378 134 aa7.48□□□□□ -1.21
MRPS28-201ENST00000276585 PAPPA-AS1Q5QFB9 102 aa7.48□□□□□ -1.21
MRPS28-201ENST00000276585 FAM19A5Q7Z5A7 132 aaPredicted RBP7.48□□□□□ -1.21
MRPS28-201ENST00000276585 TOMM7Q9P0U1 55 aa7.48□□□□□ -1.21
MRPS28-201ENST00000276585 SEC11AP67812 179 aa7.47□□□□□ -1.21
MRPS28-201ENST00000276585 C18orf32Q8TCD1 76 aa7.47□□□□□ -1.21
MRPS28-201ENST00000276585 YPEL4Q96NS1 127 aa7.47□□□□□ -1.21
MRPS28-201ENST00000276585 CST9LQ9H4G1 147 aa7.47□□□□□ -1.21
MRPS28-201ENST00000276585 TINCRA0A1B0GVN0 87 aa7.46□□□□□ -1.22
MRPS28-201ENST00000276585 APOC3P02656 99 aa7.46□□□□□ -1.22
MRPS28-201ENST00000276585 FA2HQ7L5A8 372 aa7.46□□□□□ -1.22
MRPS28-201ENST00000276585 LINC00469Q8N7U9 141 aa7.46□□□□□ -1.22
MRPS28-201ENST00000276585 PACRGQ96M98 296 aaPredicted RBP7.46□□□□□ -1.22
MRPS28-201ENST00000276585 GEMIN7Q9H840 131 aaKnown RBP7.46□□□□□ -1.22
MRPS28-201ENST00000276585 LINC01549A6NIU2 74 aa7.45□□□□□ -1.22
MRPS28-201ENST00000276585 M0QXV9 152 aa7.45□□□□□ -1.22
MRPS28-201ENST00000276585 PRSS2P07478 247 aa7.45□□□□□ -1.22
MRPS28-201ENST00000276585 C1orf137Q5JT78 98 aa7.45□□□□□ -1.22
MRPS28-201ENST00000276585 F8VRH5 84 aa7.44□□□□□ -1.22
MRPS28-201ENST00000276585 CKS1BP61024 79 aa7.44□□□□□ -1.22
MRPS28-201ENST00000276585 PMVKQ15126 192 aa7.44□□□□□ -1.22
MRPS28-201ENST00000276585 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
MRPS28-201ENST00000276585 SMCO4Q9NRQ5 59 aa7.44□□□□□ -1.22
MRPS28-201ENST00000276585 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
MRPS28-201ENST00000276585 IGLV7-43P04211 117 aa7.43□□□□□ -1.22
MRPS28-201ENST00000276585 SPINK8P0C7L1 97 aa7.43□□□□□ -1.22
MRPS28-201ENST00000276585 PDZD11Q5EBL8 140 aa7.43□□□□□ -1.22
MRPS28-201ENST00000276585 SVBPQ8N300 66 aa7.43□□□□□ -1.22
MRPS28-201ENST00000276585 XAGE1AQ9HD64 81 aa7.43□□□□□ -1.22
MRPS28-201ENST00000276585 SNAPINO95295 136 aa7.42□□□□□ -1.22
MRPS28-201ENST00000276585 IGLC3P0DOY3 106 aa7.42□□□□□ -1.22
MRPS28-201ENST00000276585 PMCHL1Q16048 86 aa7.42□□□□□ -1.22
MRPS28-201ENST00000276585 SLC7A5P1Q8MH63 180 aa7.42□□□□□ -1.22
MRPS28-201ENST00000276585 COX7B2Q8TF08 81 aa7.42□□□□□ -1.22
MRPS28-201ENST00000276585 IGLV5-39A0A0G2JS06 123 aa7.41□□□□□ -1.22
MRPS28-201ENST00000276585 LINC00614P0C842 121 aa7.41□□□□□ -1.22
MRPS28-201ENST00000276585 CXCL5P42830 114 aa7.41□□□□□ -1.22
MRPS28-201ENST00000276585 HBDP02042 147 aa7.4□□□□□ -1.22
MRPS28-201ENST00000276585 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
MRPS28-201ENST00000276585 H0Y9J4 135 aa7.39□□□□□ -1.23
MRPS28-201ENST00000276585 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
MRPS28-201ENST00000276585 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
MRPS28-201ENST00000276585 UBE2BP63146 152 aa7.38□□□□□ -1.23
MRPS28-201ENST00000276585 C11orf86A6NJI1 115 aa7.37□□□□□ -1.23
MRPS28-201ENST00000276585 CBLN2Q8IUK8 224 aa7.37□□□□□ -1.23
MRPS28-201ENST00000276585 DIRC1Q969H9 104 aa7.37□□□□□ -1.23
MRPS28-201ENST00000276585 TP73-AS1Q9UF72 201 aa7.37□□□□□ -1.23
MRPS28-201ENST00000276585 H3BRM9 83 aa7.36□□□□□ -1.23
MRPS28-201ENST00000276585 NDUFA6P56556 154 aa7.36□□□□□ -1.23
MRPS28-201ENST00000276585 PRR26Q8N8Z3 221 aa7.35□□□□□ -1.23
MRPS28-201ENST00000276585 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
MRPS28-201ENST00000276585 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
MRPS28-201ENST00000276585 ATP5LO75964 103 aa7.34□□□□□ -1.23
MRPS28-201ENST00000276585 LINC00310P59036 64 aa7.34□□□□□ -1.23
MRPS28-201ENST00000276585 RAB5BP61020 215 aa7.34□□□□□ -1.23
MRPS28-201ENST00000276585 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.23
MRPS28-201ENST00000276585 BAGE3Q86Y29 109 aa7.34□□□□□ -1.23
MRPS28-201ENST00000276585 CHCHD1Q96BP2 118 aaKnown RBP7.33□□□□□ -1.24
MRPS28-201ENST00000276585 LINC00167Q96N53 147 aa7.33□□□□□ -1.24
MRPS28-201ENST00000276585 NUPR1O60356 82 aa7.32□□□□□ -1.24
MRPS28-201ENST00000276585 SCO1O75880 301 aa7.32□□□□□ -1.24
MRPS28-201ENST00000276585 LBHQ53QV2 105 aaPredicted RBP7.32□□□□□ -1.24
MRPS28-201ENST00000276585 Q8NDZ9 215 aa7.32□□□□□ -1.24
MRPS28-201ENST00000276585 ZNF625Q96I27 306 aaPredicted RBP7.32□□□□□ -1.24
MRPS28-201ENST00000276585 MUC17Q685J3 4493 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 192.8 ms