RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TMEM258P61165 79 aa10.97□□□□□ -0.65
TIMP3-201ENST00000266085 UPK3BQ9BT76 320 aa10.97□□□□□ -0.65
TIMP3-201ENST00000266085 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
TIMP3-201ENST00000266085 COX6A2Q02221 97 aa10.97□□□□□ -0.65
TIMP3-201ENST00000266085 LRCOL1A6NCL2 159 aa10.96□□□□□ -0.65
TIMP3-201ENST00000266085 MT-ATP8P03928 68 aa10.96□□□□□ -0.65
TIMP3-201ENST00000266085 TSPEAR-AS2P59090 65 aa10.96□□□□□ -0.65
TIMP3-201ENST00000266085 ZNF73O43830 326 aaPredicted RBP10.96□□□□□ -0.66
TIMP3-201ENST00000266085 EGFEM1PQ0D2K5 195 aa10.96□□□□□ -0.66
TIMP3-201ENST00000266085 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
TIMP3-201ENST00000266085 DHRS4-AS1Q9P1J3 65 aa10.95□□□□□ -0.66
TIMP3-201ENST00000266085 WDFY4Q6ZS81 3184 aa10.94□□□□□ -0.66
TIMP3-201ENST00000266085 A0A1B0GUV1 79 aa10.94□□□□□ -0.66
TIMP3-201ENST00000266085 FHL3Q13643 280 aa10.94□□□□□ -0.66
TIMP3-201ENST00000266085 ATP5EP2Q5VTU8 51 aa10.94□□□□□ -0.66
TIMP3-201ENST00000266085 COL27A1Q8IZC6 1860 aaPredicted RBP10.94□□□□□ -0.66
TIMP3-201ENST00000266085 C7orf33Q8WU49 177 aa10.93□□□□□ -0.66
TIMP3-201ENST00000266085 SS18L2Q9UHA2 77 aa10.93□□□□□ -0.66
TIMP3-201ENST00000266085 C9orf116Q5BN46 136 aaPredicted RBP10.93□□□□□ -0.66
TIMP3-201ENST00000266085 C11orf72Q8NBR9 251 aa10.93□□□□□ -0.66
TIMP3-201ENST00000266085 RPL37AP8A6NKH3 93 aa10.93□□□□□ -0.66
TIMP3-201ENST00000266085 CFAP54Q96N23 3096 aa10.92□□□□□ -0.66
TIMP3-201ENST00000266085 FSHBP01225 129 aa10.92□□□□□ -0.66
TIMP3-201ENST00000266085 SCXQ7RTU7 201 aa10.92□□□□□ -0.66
TIMP3-201ENST00000266085 NUPR2A6NF83 97 aa10.91□□□□□ -0.66
TIMP3-201ENST00000266085 WFDC9Q8NEX5 89 aa10.91□□□□□ -0.66
TIMP3-201ENST00000266085 UNC80Q8N2C7 3258 aa10.9□□□□□ -0.67
TIMP3-201ENST00000266085 ENHOQ6UWT2 76 aa10.89□□□□□ -0.67
TIMP3-201ENST00000266085 PPDPFQ9H3Y8 114 aa10.89□□□□□ -0.67
TIMP3-201ENST00000266085 NDUFV3P56181 108 aaKnown RBP10.89□□□□□ -0.67
TIMP3-201ENST00000266085 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
TIMP3-201ENST00000266085 C3orf84H3BNL1 204 aa10.89□□□□□ -0.67
TIMP3-201ENST00000266085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.89□□□□□ -0.67
TIMP3-201ENST00000266085 FAM19A4Q96LR4 140 aa10.89□□□□□ -0.67
TIMP3-201ENST00000266085 TRIOO75962 3097 aa10.89□□□□□ -0.67
TIMP3-201ENST00000266085 LINC00474Q9P2X8 69 aa10.88□□□□□ -0.67
TIMP3-201ENST00000266085 LINC00315P59091 139 aa10.88□□□□□ -0.67
TIMP3-201ENST00000266085 LYPD5Q6UWN5 251 aa10.88□□□□□ -0.67
TIMP3-201ENST00000266085 WFDC10BQ8IUB3 73 aa10.88□□□□□ -0.67
TIMP3-201ENST00000266085 KRTAP24-1Q3LI83 254 aa10.88□□□□□ -0.67
TIMP3-201ENST00000266085 RPL28P46779 137 aaKnown RBP10.87□□□□□ -0.67
TIMP3-201ENST00000266085 C20orf197Q8N268 126 aa10.86□□□□□ -0.67
TIMP3-201ENST00000266085 USP17L23D6RBM5 183 aa10.86□□□□□ -0.67
TIMP3-201ENST00000266085 CHKB-CPT1BH3BT56 60 aa10.86□□□□□ -0.67
TIMP3-201ENST00000266085 TRBV10-3A0A0K0K1G6 114 aa10.86□□□□□ -0.67
TIMP3-201ENST00000266085 CELA1Q9UNI1 258 aa10.85□□□□□ -0.67
TIMP3-201ENST00000266085 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
TIMP3-201ENST00000266085 PRR3P79522 188 aaKnown RBP10.85□□□□□ -0.67
TIMP3-201ENST00000266085 C6orf223Q8N319 242 aa10.85□□□□□ -0.67
TIMP3-201ENST00000266085 ZNF706Q9Y5V0 76 aaPredicted RBP10.83□□□□□ -0.68
TIMP3-201ENST00000266085 IGKV4-1P06312 121 aa10.83□□□□□ -0.68
TIMP3-201ENST00000266085 UQCRQO14949 82 aa10.83□□□□□ -0.68
TIMP3-201ENST00000266085 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
TIMP3-201ENST00000266085 M0QXV9 152 aa10.82□□□□□ -0.68
TIMP3-201ENST00000266085 NTM-AS1Q6ZSK4 140 aa10.82□□□□□ -0.68
TIMP3-201ENST00000266085 DSPP15924 2871 aaKnown RBP10.82□□□□□ -0.68
TIMP3-201ENST00000266085 PLAC8L1A1L4L8 177 aa10.81□□□□□ -0.68
TIMP3-201ENST00000266085 KLK9Q2XQG4 91 aa10.81□□□□□ -0.68
TIMP3-201ENST00000266085 IMUPQ9GZP8 106 aa10.81□□□□□ -0.68
TIMP3-201ENST00000266085 XIRP2A4UGR9 3374 aa10.81□□□□□ -0.68
TIMP3-201ENST00000266085 MAP1AP78559 2803 aaPredicted RBP10.8□□□□□ -0.68
TIMP3-201ENST00000266085 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
TIMP3-201ENST00000266085 Q8N814 137 aa10.8□□□□□ -0.68
TIMP3-201ENST00000266085 C2orf48Q96LS8 159 aa10.8□□□□□ -0.68
TIMP3-201ENST00000266085 J3KT08 172 aa10.79□□□□□ -0.68
TIMP3-201ENST00000266085 NDUFC2O95298 119 aa10.79□□□□□ -0.68
TIMP3-201ENST00000266085 Q9UF83 564 aa10.79□□□□□ -0.68
TIMP3-201ENST00000266085 LINC01546A6NGU7 62 aa10.79□□□□□ -0.68
TIMP3-201ENST00000266085 C5orf47Q569G3 176 aa10.79□□□□□ -0.68
TIMP3-201ENST00000266085 IGHV3OR16-9A0A0B4J2B5 98 aa10.78□□□□□ -0.68
TIMP3-201ENST00000266085 A0A096LNT2 108 aa10.77□□□□□ -0.68
TIMP3-201ENST00000266085 SPINK6Q6UWN8 80 aa10.77□□□□□ -0.68
TIMP3-201ENST00000266085 F8WDY8 70 aa10.77□□□□□ -0.69
TIMP3-201ENST00000266085 SETXQ7Z333 2677 aaKnown RBP10.77□□□□□ -0.69
TIMP3-201ENST00000266085 XGP55808 180 aa10.77□□□□□ -0.69
TIMP3-201ENST00000266085 X6R8D5 127 aa10.77□□□□□ -0.69
TIMP3-201ENST00000266085 IGLV5-39A0A0G2JS06 123 aa10.76□□□□□ -0.69
TIMP3-201ENST00000266085 AKAP13Q12802 2813 aa10.75□□□□□ -0.69
TIMP3-201ENST00000266085 FAM240AA0A1B0GVK7 77 aa10.75□□□□□ -0.69
TIMP3-201ENST00000266085 A0A087WYN8 130 aa10.75□□□□□ -0.69
TIMP3-201ENST00000266085 IGLV9-49A0A0B4J1Y8 123 aa10.75□□□□□ -0.69
TIMP3-201ENST00000266085 NHLRC4P0CG21 123 aaPredicted RBP10.74□□□□□ -0.69
TIMP3-201ENST00000266085 Q6ZRU5 148 aa10.73□□□□□ -0.69
TIMP3-201ENST00000266085 REG3GQ6UW15 175 aa10.73□□□□□ -0.69
TIMP3-201ENST00000266085 WFDC13Q8IUB5 93 aa10.73□□□□□ -0.69
TIMP3-201ENST00000266085 SBSPONQ8IVN8 264 aa10.72□□□□□ -0.69
TIMP3-201ENST00000266085 HRCT1Q6UXD1 115 aa10.72□□□□□ -0.69
TIMP3-201ENST00000266085 ESRGQ1W209 222 aa10.72□□□□□ -0.69
TIMP3-201ENST00000266085 FAM19A3Q7Z5A8 133 aa10.72□□□□□ -0.69
TIMP3-201ENST00000266085 LINC00337Q8N6G1 96 aa10.72□□□□□ -0.69
TIMP3-201ENST00000266085 SERP2Q8N6R1 65 aa10.72□□□□□ -0.69
TIMP3-201ENST00000266085 C1orf137Q5JT78 98 aa10.71□□□□□ -0.69
TIMP3-201ENST00000266085 C3orf22Q8N5N4 141 aa10.71□□□□□ -0.69
TIMP3-201ENST00000266085 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
TIMP3-201ENST00000266085 Q6JHZ5 121 aa10.7□□□□□ -0.7
TIMP3-201ENST00000266085 MRPL55Q7Z7F7 128 aaKnown RBP10.69□□□□□ -0.7
TIMP3-201ENST00000266085 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
TIMP3-201ENST00000266085 IGLV5-52A0A0A0MRZ9 124 aa10.69□□□□□ -0.7
TIMP3-201ENST00000266085 VPS13AQ96RL7 3174 aa10.68□□□□□ -0.7
TIMP3-201ENST00000266085 STAB1Q9NY15 2570 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms