RNA–Protein interactions for RNA: ENST00000264596.3

NEIL3-201, Transcript of nei like DNA glycosylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL3, Length 2,408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-201ENST00000264596 LINC00612Q8N6U2 182 aa13.71□□□□□ -0.21
NEIL3-201ENST00000264596 GCN1Q92616 2671 aaKnown RBP13.71□□□□□ -0.22
NEIL3-201ENST00000264596 C22orf24Q9Y442 160 aa13.71□□□□□ -0.22
NEIL3-201ENST00000264596 PAX4O43316 350 aa13.7□□□□□ -0.22
NEIL3-201ENST00000264596 SS18Q15532 418 aa13.69□□□□□ -0.22
NEIL3-201ENST00000264596 SPATA3Q8NHX4 192 aa13.69□□□□□ -0.22
NEIL3-201ENST00000264596 NBEAL2Q6ZNJ1 2754 aa13.69□□□□□ -0.22
NEIL3-201ENST00000264596 A0A087WYN8 130 aa13.68□□□□□ -0.22
NEIL3-201ENST00000264596 PRO0255Q9UI72 69 aa13.68□□□□□ -0.22
NEIL3-201ENST00000264596 DEFB4AO15263 64 aa13.68□□□□□ -0.22
NEIL3-201ENST00000264596 TMEM126AQ9H061 195 aa13.68□□□□□ -0.22
NEIL3-201ENST00000264596 OR13C6PQ8NH95 151 aa13.67□□□□□ -0.22
NEIL3-201ENST00000264596 IMUPQ9GZP8 106 aa13.67□□□□□ -0.22
NEIL3-201ENST00000264596 HIVEP2P31629 2446 aa13.67□□□□□ -0.22
NEIL3-201ENST00000264596 ACYP1P07311 99 aa13.66□□□□□ -0.22
NEIL3-201ENST00000264596 MALP21145 153 aa13.66□□□□□ -0.22
NEIL3-201ENST00000264596 A0A1B0GUV1 79 aa13.65□□□□□ -0.22
NEIL3-201ENST00000264596 DNAL4O96015 105 aa13.65□□□□□ -0.22
NEIL3-201ENST00000264596 ATP5G1P05496 136 aa13.64□□□□□ -0.23
NEIL3-201ENST00000264596 SMCR5Q8TEV8 140 aa13.64□□□□□ -0.23
NEIL3-201ENST00000264596 J3QKU1 62 aa13.64□□□□□ -0.23
NEIL3-201ENST00000264596 DEFB135Q30KP9 77 aa13.63□□□□□ -0.23
NEIL3-201ENST00000264596 UNC79Q9P2D8 2635 aa13.63□□□□□ -0.23
NEIL3-201ENST00000264596 FAM236AA0A1B0GUQ0 79 aa13.63□□□□□ -0.23
NEIL3-201ENST00000264596 FAM236BA0A1B0GV22 79 aa13.63□□□□□ -0.23
NEIL3-201ENST00000264596 SMIM9A6NGZ8 99 aa13.63□□□□□ -0.23
NEIL3-201ENST00000264596 FASNP49327 2511 aaKnown RBP13.62□□□□□ -0.23
NEIL3-201ENST00000264596 Q8IZM0 81 aa13.62□□□□□ -0.23
NEIL3-201ENST00000264596 LINC00269Q8N2A0 174 aa13.62□□□□□ -0.23
NEIL3-201ENST00000264596 Q8N3U1 123 aa13.62□□□□□ -0.23
NEIL3-201ENST00000264596 GAGE2AQ6NT46 116 aa13.61□□□□□ -0.23
NEIL3-201ENST00000264596 VWFP04275 2813 aa13.6□□□□□ -0.23
NEIL3-201ENST00000264596 H0YGX0 51 aa13.6□□□□□ -0.23
NEIL3-201ENST00000264596 LECT2O14960 151 aa13.6□□□□□ -0.23
NEIL3-201ENST00000264596 IGLV10-54A0A075B6I4 117 aa13.6□□□□□ -0.23
NEIL3-201ENST00000264596 INAFM2P0DMQ5 153 aa13.6□□□□□ -0.23
NEIL3-201ENST00000264596 C3orf56Q8N813 242 aa13.6□□□□□ -0.23
NEIL3-201ENST00000264596 HELZ2Q9BYK8 2649 aaKnown RBP13.6□□□□□ -0.23
NEIL3-201ENST00000264596 LY6G6DO95868 133 aa13.59□□□□□ -0.23
NEIL3-201ENST00000264596 C9orf129Q5T035 196 aaKnown RBP13.59□□□□□ -0.23
NEIL3-201ENST00000264596 SDIM1Q6ZPB5 146 aa13.59□□□□□ -0.23
NEIL3-201ENST00000264596 LYRM9A8MSI8 78 aa13.58□□□□□ -0.24
NEIL3-201ENST00000264596 LINC00643Q86TS7 51 aa13.58□□□□□ -0.24
NEIL3-201ENST00000264596 ANGP03950 147 aaKnown RBP13.57□□□□□ -0.24
NEIL3-201ENST00000264596 C9orf66Q5T8R8 295 aa13.57□□□□□ -0.24
NEIL3-201ENST00000264596 SLPIP03973 132 aa13.56□□□□□ -0.24
NEIL3-201ENST00000264596 PRR3P79522 188 aaKnown RBP13.56□□□□□ -0.24
NEIL3-201ENST00000264596 IGHV4-28A0A0C4DH34 117 aa13.56□□□□□ -0.24
NEIL3-201ENST00000264596 CHCHD10Q8WYQ3 142 aaPredicted RBP13.56□□□□□ -0.24
NEIL3-201ENST00000264596 C3orf22Q8N5N4 141 aa13.55□□□□□ -0.24
NEIL3-201ENST00000264596 C14orf132Q9NPU4 83 aa13.55□□□□□ -0.24
NEIL3-201ENST00000264596 DAD1P61803 113 aa13.54□□□□□ -0.24
NEIL3-201ENST00000264596 CD164L2Q6UWJ8 174 aa13.54□□□□□ -0.24
NEIL3-201ENST00000264596 REG3AQ06141 175 aa13.54□□□□□ -0.24
NEIL3-201ENST00000264596 KIAA0087Q14695 138 aa13.53□□□□□ -0.24
NEIL3-201ENST00000264596 LINC01561Q8N1V8 128 aa13.53□□□□□ -0.24
NEIL3-201ENST00000264596 CELA1Q9UNI1 258 aa13.53□□□□□ -0.24
NEIL3-201ENST00000264596 UQCRQO14949 82 aa13.52□□□□□ -0.24
NEIL3-201ENST00000264596 C9orf116Q5BN46 136 aaPredicted RBP13.52□□□□□ -0.24
NEIL3-201ENST00000264596 C9orf153Q5TBE3 101 aa13.52□□□□□ -0.24
NEIL3-201ENST00000264596 INAFM1C9JVW0 142 aa13.51□□□□□ -0.25
NEIL3-201ENST00000264596 HTN3P15516 51 aa13.51□□□□□ -0.25
NEIL3-201ENST00000264596 APOC4P55056 127 aa13.51□□□□□ -0.25
NEIL3-201ENST00000264596 LINC00526Q96FQ7 95 aa13.51□□□□□ -0.25
NEIL3-201ENST00000264596 NCR3O14931 201 aa13.5□□□□□ -0.25
NEIL3-201ENST00000264596 CXCL5P42830 114 aa13.5□□□□□ -0.25
NEIL3-201ENST00000264596 NANOS2P60321 138 aaKnown RBP13.49□□□□□ -0.25
NEIL3-201ENST00000264596 ORMDL1Q9P0S3 153 aa13.48□□□□□ -0.25
NEIL3-201ENST00000264596 Q8NAQ8 132 aa13.47□□□□□ -0.25
NEIL3-201ENST00000264596 OBSCN-AS1Q96MR7 158 aa13.47□□□□□ -0.25
NEIL3-201ENST00000264596 COX17Q14061 63 aa13.46□□□□□ -0.25
NEIL3-201ENST00000264596 KLK5Q9Y337 293 aaPredicted RBP13.45□□□□□ -0.26
NEIL3-201ENST00000264596 TENM1Q9UKZ4 2725 aa13.45□□□□□ -0.26
NEIL3-201ENST00000264596 C6orf223Q8N319 242 aa13.44□□□□□ -0.26
NEIL3-201ENST00000264596 NDUFC2O95298 119 aa13.44□□□□□ -0.26
NEIL3-201ENST00000264596 Q8NDZ9 215 aa13.44□□□□□ -0.26
NEIL3-201ENST00000264596 HECTD1Q9ULT8 2610 aa13.44□□□□□ -0.26
NEIL3-201ENST00000264596 COX7CP15954 63 aa13.43□□□□□ -0.26
NEIL3-201ENST00000264596 HIST1H4AP62805 103 aaKnown RBP13.43□□□□□ -0.26
NEIL3-201ENST00000264596 MIFP14174 115 aa13.43□□□□□ -0.26
NEIL3-201ENST00000264596 C2orf48Q96LS8 159 aa13.43□□□□□ -0.26
NEIL3-201ENST00000264596 NOTCH2Q04721 2471 aa13.43□□□□□ -0.26
NEIL3-201ENST00000264596 C10orf25Q5T742 122 aa13.42□□□□□ -0.26
NEIL3-201ENST00000264596 SPART-AS1P0CW21 52 aa13.42□□□□□ -0.26
NEIL3-201ENST00000264596 UNQ6190/PRO20217Q6UXQ8 127 aa13.42□□□□□ -0.26
NEIL3-201ENST00000264596 Q8N814 137 aa13.42□□□□□ -0.26
NEIL3-201ENST00000264596 SPAG11BQ08648 103 aa13.41□□□□□ -0.26
NEIL3-201ENST00000264596 LINC00846Q9NV44 126 aa13.41□□□□□ -0.26
NEIL3-201ENST00000264596 OTOGQ6ZRI0 2925 aa13.4□□□□□ -0.26
NEIL3-201ENST00000264596 KMT2BQ9UMN6 2715 aaPredicted RBP13.4□□□□□ -0.26
NEIL3-201ENST00000264596 A0A1B0GX51 115 aa13.4□□□□□ -0.26
NEIL3-201ENST00000264596 KLK12Q9UKR0 248 aa13.4□□□□□ -0.26
NEIL3-201ENST00000264596 CRYGAP11844 174 aa13.4□□□□□ -0.26
NEIL3-201ENST00000264596 LELP1Q5T871 98 aa13.4□□□□□ -0.26
NEIL3-201ENST00000264596 C6orf99Q4VX62 202 aa13.39□□□□□ -0.27
NEIL3-201ENST00000264596 S100A7L2Q5SY68 101 aa13.39□□□□□ -0.27
NEIL3-201ENST00000264596 LINC00167Q96N53 147 aa13.39□□□□□ -0.27
NEIL3-201ENST00000264596 IGKV3D-7A0A0C4DH55 119 aa13.38□□□□□ -0.27
NEIL3-201ENST00000264596 LOC107984640A0A0U1RRK4 108 aa13.38□□□□□ -0.27
NEIL3-201ENST00000264596 IGHV4-30-4P0DP06 118 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms