RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 DMBT1Q9UGM3 2413 aaPredicted RBP11.52□□□□□ -0.57
COPE-201ENST00000262812 NDUFA6P56556 154 aa11.51□□□□□ -0.57
COPE-201ENST00000262812 CKS1BP61024 79 aa11.51□□□□□ -0.57
COPE-201ENST00000262812 PMVKQ15126 192 aa11.51□□□□□ -0.57
COPE-201ENST00000262812 LRP1Q07954 4544 aaKnown RBP11.51□□□□□ -0.57
COPE-201ENST00000262812 FAT3Q8TDW7 4589 aa11.49□□□□□ -0.57
COPE-201ENST00000262812 A0A096LNJ9 63 aa11.49□□□□□ -0.57
COPE-201ENST00000262812 TINCRA0A1B0GVN0 87 aa11.49□□□□□ -0.57
COPE-201ENST00000262812 TRBV30A0A0K0K1B3 111 aa11.48□□□□□ -0.57
COPE-201ENST00000262812 FAM168BA1KXE4 195 aa11.48□□□□□ -0.57
COPE-201ENST00000262812 TLX1NBP0CAT3 122 aa11.48□□□□□ -0.57
COPE-201ENST00000262812 RAB5BP61020 215 aa11.48□□□□□ -0.57
COPE-201ENST00000262812 PRR3P79522 188 aaKnown RBP11.48□□□□□ -0.57
COPE-201ENST00000262812 Q8IZM0 81 aa11.48□□□□□ -0.57
COPE-201ENST00000262812 OXTP01178 125 aa11.47□□□□□ -0.57
COPE-201ENST00000262812 HBDP02042 147 aa11.47□□□□□ -0.57
COPE-201ENST00000262812 PHF5AQ7RTV0 110 aaKnown RBP11.47□□□□□ -0.57
COPE-201ENST00000262812 SMIM1B2RUZ4 78 aa11.45□□□□□ -0.58
COPE-201ENST00000262812 NDUFC2-KCTD14E9PQ53 114 aa11.45□□□□□ -0.58
COPE-201ENST00000262812 SPINK8P0C7L1 97 aa11.45□□□□□ -0.58
COPE-201ENST00000262812 FAM19A5Q7Z5A7 132 aaPredicted RBP11.45□□□□□ -0.58
COPE-201ENST00000262812 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
COPE-201ENST00000262812 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
COPE-201ENST00000262812 COX7B2Q8TF08 81 aa11.43□□□□□ -0.58
COPE-201ENST00000262812 F8VRH5 84 aa11.42□□□□□ -0.58
COPE-201ENST00000262812 H3BRM9 83 aa11.41□□□□□ -0.58
COPE-201ENST00000262812 ATP5LO75964 103 aa11.41□□□□□ -0.58
COPE-201ENST00000262812 C9orf129Q5T035 196 aaKnown RBP11.41□□□□□ -0.58
COPE-201ENST00000262812 BAGE3Q86Y29 109 aa11.41□□□□□ -0.58
COPE-201ENST00000262812 TRGC2P03986 189 aa11.4□□□□□ -0.58
COPE-201ENST00000262812 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
COPE-201ENST00000262812 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.58
COPE-201ENST00000262812 PSORS1C2Q9UIG4 136 aa11.4□□□□□ -0.58
COPE-201ENST00000262812 CXCL5P42830 114 aa11.39□□□□□ -0.59
COPE-201ENST00000262812 KRTAP7-1Q8IUC3 87 aa11.39□□□□□ -0.59
COPE-201ENST00000262812 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
COPE-201ENST00000262812 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
COPE-201ENST00000262812 C1orf137Q5JT78 98 aa11.37□□□□□ -0.59
COPE-201ENST00000262812 M0QXV9 152 aa11.36□□□□□ -0.59
COPE-201ENST00000262812 SPINK6Q6UWN8 80 aa11.36□□□□□ -0.59
COPE-201ENST00000262812 KRTAP11-1Q8IUC1 163 aa11.36□□□□□ -0.59
COPE-201ENST00000262812 FAM19A2Q8N3H0 131 aa11.36□□□□□ -0.59
COPE-201ENST00000262812 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
COPE-201ENST00000262812 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
COPE-201ENST00000262812 CHTOPQ9Y3Y2 248 aaKnown RBP11.35□□□□□ -0.59
COPE-201ENST00000262812 COLCA2A8K830 154 aa11.34□□□□□ -0.59
COPE-201ENST00000262812 HSBP1O75506 76 aa11.34□□□□□ -0.59
COPE-201ENST00000262812 UBE2BP63146 152 aa11.34□□□□□ -0.59
COPE-201ENST00000262812 TMEM170BQ5T4T1 132 aa11.34□□□□□ -0.59
COPE-201ENST00000262812 SERTAD4-AS1Q5TG53 156 aa11.34□□□□□ -0.59
COPE-201ENST00000262812 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
COPE-201ENST00000262812 IGLV5-39A0A0G2JS06 123 aa11.32□□□□□ -0.6
COPE-201ENST00000262812 MT1HL1P0DM35 61 aa11.31□□□□□ -0.6
COPE-201ENST00000262812 C22orf24Q9Y442 160 aa11.31□□□□□ -0.6
COPE-201ENST00000262812 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
COPE-201ENST00000262812 H0Y8G0 127 aa11.29□□□□□ -0.6
COPE-201ENST00000262812 SCO1O75880 301 aa11.29□□□□□ -0.6
COPE-201ENST00000262812 SERF1AO75920 110 aa11.29□□□□□ -0.6
COPE-201ENST00000262812 PFN2P35080 140 aa11.29□□□□□ -0.6
COPE-201ENST00000262812 REG3GQ6UW15 175 aa11.29□□□□□ -0.6
COPE-201ENST00000262812 IGLV7-43P04211 117 aa11.28□□□□□ -0.6
COPE-201ENST00000262812 ZNF625Q96I27 306 aaPredicted RBP11.28□□□□□ -0.6
COPE-201ENST00000262812 LINC01600Q96MT4 127 aa11.28□□□□□ -0.6
COPE-201ENST00000262812 NUPR1O60356 82 aa11.27□□□□□ -0.61
COPE-201ENST00000262812 LINC00310P59036 64 aa11.27□□□□□ -0.61
COPE-201ENST00000262812 LBHQ53QV2 105 aaPredicted RBP11.26□□□□□ -0.61
COPE-201ENST00000262812 LEPROTL1O95214 131 aa11.25□□□□□ -0.61
COPE-201ENST00000262812 TMEM223A0PJW6 202 aa11.24□□□□□ -0.61
COPE-201ENST00000262812 FABP4P15090 132 aa11.24□□□□□ -0.61
COPE-201ENST00000262812 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
COPE-201ENST00000262812 MRPL55Q7Z7F7 128 aaKnown RBP11.23□□□□□ -0.61
COPE-201ENST00000262812 GAGE10A6NGK3 116 aa11.22□□□□□ -0.61
COPE-201ENST00000262812 DIRC1Q969H9 104 aa11.22□□□□□ -0.61
COPE-201ENST00000262812 HMCN2Q8NDA2 5059 aa11.22□□□□□ -0.61
COPE-201ENST00000262812 RPL37AP8A6NKH3 93 aa11.21□□□□□ -0.61
COPE-201ENST00000262812 LINC00167Q96N53 147 aa11.21□□□□□ -0.61
COPE-201ENST00000262812 TP73-AS1Q9UF72 201 aa11.21□□□□□ -0.61
COPE-201ENST00000262812 ODF1Q14990 250 aa11.2□□□□□ -0.62
COPE-201ENST00000262812 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
COPE-201ENST00000262812 HSPB8Q9UJY1 196 aa11.2□□□□□ -0.62
COPE-201ENST00000262812 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
COPE-201ENST00000262812 KRTAP10-8P60410 259 aa11.19□□□□□ -0.62
COPE-201ENST00000262812 NKAPP1Q8N9T2 125 aa11.19□□□□□ -0.62
COPE-201ENST00000262812 TNXBP22105 4242 aa11.19□□□□□ -0.62
COPE-201ENST00000262812 A0A0U1RRA0 63 aa11.18□□□□□ -0.62
COPE-201ENST00000262812 H0Y9J4 135 aa11.18□□□□□ -0.62
COPE-201ENST00000262812 LINC00158P58513 81 aa11.18□□□□□ -0.62
COPE-201ENST00000262812 COX17Q14061 63 aa11.18□□□□□ -0.62
COPE-201ENST00000262812 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
COPE-201ENST00000262812 PMCHL2Q9BQD1 86 aa11.18□□□□□ -0.62
COPE-201ENST00000262812 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
COPE-201ENST00000262812 HIST1H2BKO60814 126 aa11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST1H2BJP06899 126 aa11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST1H2BOP23527 126 aa11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST1H2BBP33778 126 aa11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST1H2BDP58876 126 aa11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST1H2BCP62807 126 aa11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST2H2BEQ16778 126 aa11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.15□□□□□ -0.62
COPE-201ENST00000262812 HIST1H2BHQ93079 126 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms