RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 MEIG1Q5JSS6 88 aa8.69□□□□□ -1.02
VAMP7-201ENST00000262640 CSMD3Q7Z407 3707 aa8.68□□□□□ -1.02
VAMP7-201ENST00000262640 A6NDN8 102 aa8.68□□□□□ -1.02
VAMP7-201ENST00000262640 PTTG1IPP53801 180 aa8.68□□□□□ -1.02
VAMP7-201ENST00000262640 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
VAMP7-201ENST00000262640 STARD9Q9P2P6 4700 aa8.67□□□□□ -1.02
VAMP7-201ENST00000262640 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
VAMP7-201ENST00000262640 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
VAMP7-201ENST00000262640 A6NJY4 79 aa8.66□□□□□ -1.02
VAMP7-201ENST00000262640 C2orf82Q6UX34 121 aa8.66□□□□□ -1.02
VAMP7-201ENST00000262640 COX11Q9Y6N1 276 aa8.66□□□□□ -1.02
VAMP7-201ENST00000262640 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
VAMP7-201ENST00000262640 DNAH1Q9P2D7 4330 aa8.65□□□□□ -1.02
VAMP7-201ENST00000262640 SMIM13P0DJ93 91 aa8.65□□□□□ -1.02
VAMP7-201ENST00000262640 IFITM1P13164 125 aa8.65□□□□□ -1.02
VAMP7-201ENST00000262640 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.02
VAMP7-201ENST00000262640 MUSTN1Q8IVN3 82 aa8.64□□□□□ -1.03
VAMP7-201ENST00000262640 C15orf56Q8N910 161 aa8.64□□□□□ -1.03
VAMP7-201ENST00000262640 RPL24P83731 157 aaKnown RBP8.64□□□□□ -1.03
VAMP7-201ENST00000262640 ERG28Q9UKR5 140 aa8.64□□□□□ -1.03
VAMP7-201ENST00000262640 A0A0U1RRA0 63 aa8.63□□□□□ -1.03
VAMP7-201ENST00000262640 ZNF561-AS1K7EIQ3 104 aa8.63□□□□□ -1.03
VAMP7-201ENST00000262640 NTN5Q8WTR8 489 aaPredicted RBP8.63□□□□□ -1.03
VAMP7-201ENST00000262640 COPS9Q8WXC6 57 aa8.63□□□□□ -1.03
VAMP7-201ENST00000262640 NHP2Q9NX24 153 aaKnown RBP8.63□□□□□ -1.03
VAMP7-201ENST00000262640 LINC00158P58513 81 aa8.63□□□□□ -1.03
VAMP7-201ENST00000262640 C6orf223Q8N319 242 aa8.63□□□□□ -1.03
VAMP7-201ENST00000262640 DAND5Q8N907 189 aa8.63□□□□□ -1.03
VAMP7-201ENST00000262640 GVQW2A0A096LPI5 108 aaPredicted RBP8.62□□□□□ -1.03
VAMP7-201ENST00000262640 NBDYA0A0U1RRE5 68 aa8.62□□□□□ -1.03
VAMP7-201ENST00000262640 HIGD2BQ4VC39 106 aa8.62□□□□□ -1.03
VAMP7-201ENST00000262640 F8WDY8 70 aa8.62□□□□□ -1.03
VAMP7-201ENST00000262640 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
VAMP7-201ENST00000262640 C2orf48Q96LS8 159 aa8.62□□□□□ -1.03
VAMP7-201ENST00000262640 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
VAMP7-201ENST00000262640 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
VAMP7-201ENST00000262640 COX17Q14061 63 aa8.61□□□□□ -1.03
VAMP7-201ENST00000262640 LINC00308Q8TCZ7 52 aa8.61□□□□□ -1.03
VAMP7-201ENST00000262640 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
VAMP7-201ENST00000262640 PFN2P35080 140 aa8.61□□□□□ -1.03
VAMP7-201ENST00000262640 UNQ6190/PRO20217Q6UXQ8 127 aa8.61□□□□□ -1.03
VAMP7-201ENST00000262640 MIR7-3HGQ8N6C7 128 aa8.61□□□□□ -1.03
VAMP7-201ENST00000262640 A4D1N5 150 aa8.6□□□□□ -1.03
VAMP7-201ENST00000262640 NPC2P61916 151 aa8.6□□□□□ -1.03
VAMP7-201ENST00000262640 C10orf25Q5T742 122 aa8.6□□□□□ -1.03
VAMP7-201ENST00000262640 LYSTQ99698 3801 aa8.6□□□□□ -1.03
VAMP7-201ENST00000262640 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.6□□□□□ -1.03
VAMP7-201ENST00000262640 TAX1BP3O14907 124 aa8.6□□□□□ -1.03
VAMP7-201ENST00000262640 CAMK2N2Q96S95 79 aa8.6□□□□□ -1.03
VAMP7-201ENST00000262640 USP17L23D6RBM5 183 aa8.59□□□□□ -1.03
VAMP7-201ENST00000262640 K7ERJ3 54 aa8.59□□□□□ -1.03
VAMP7-201ENST00000262640 CASC10Q5T4H9 136 aa8.59□□□□□ -1.03
VAMP7-201ENST00000262640 TRBV30A0A0K0K1B3 111 aa8.59□□□□□ -1.03
VAMP7-201ENST00000262640 C3orf84H3BNL1 204 aa8.59□□□□□ -1.03
VAMP7-201ENST00000262640 TENM2Q9NT68 2774 aa8.58□□□□□ -1.04
VAMP7-201ENST00000262640 EIF4EBP3O60516 100 aaPredicted RBP8.58□□□□□ -1.04
VAMP7-201ENST00000262640 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
VAMP7-201ENST00000262640 CFC1P0CG37 223 aa8.58□□□□□ -1.04
VAMP7-201ENST00000262640 SOSTDC1Q6X4U4 206 aa8.58□□□□□ -1.04
VAMP7-201ENST00000262640 PSCAO43653 123 aa8.57□□□□□ -1.04
VAMP7-201ENST00000262640 C9orf116Q5BN46 136 aaPredicted RBP8.57□□□□□ -1.04
VAMP7-201ENST00000262640 RAB37Q96AX2 223 aa8.57□□□□□ -1.04
VAMP7-201ENST00000262640 C6orf48Q9UBA6 75 aa8.57□□□□□ -1.04
VAMP7-201ENST00000262640 TGP01266 2768 aa8.57□□□□□ -1.04
VAMP7-201ENST00000262640 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
VAMP7-201ENST00000262640 Q6ZRU5 148 aa8.56□□□□□ -1.04
VAMP7-201ENST00000262640 A0A1B0GV90 55 aa8.56□□□□□ -1.04
VAMP7-201ENST00000262640 C9orf118A6NHY6 69 aa8.55□□□□□ -1.04
VAMP7-201ENST00000262640 SYCNQ0VAF6 134 aa8.55□□□□□ -1.04
VAMP7-201ENST00000262640 PRO1854Q9UHT4 67 aa8.55□□□□□ -1.04
VAMP7-201ENST00000262640 LOC107984156A0A0G2JMH3 177 aa8.54□□□□□ -1.04
VAMP7-201ENST00000262640 ARL17AQ8IVW1 177 aa8.54□□□□□ -1.04
VAMP7-201ENST00000262640 LECT2O14960 151 aa8.54□□□□□ -1.04
VAMP7-201ENST00000262640 M0R2N4 97 aa8.53□□□□□ -1.04
VAMP7-201ENST00000262640 CARD19Q96LW7 228 aa8.53□□□□□ -1.04
VAMP7-201ENST00000262640 SND1-IT1Q9HBX3 110 aa8.53□□□□□ -1.04
VAMP7-201ENST00000262640 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
VAMP7-201ENST00000262640 Q6ZR54 194 aa8.53□□□□□ -1.04
VAMP7-201ENST00000262640 LINC00476Q8WZB0 136 aa8.53□□□□□ -1.04
VAMP7-201ENST00000262640 LY6G6CO95867 125 aa8.52□□□□□ -1.05
VAMP7-201ENST00000262640 C14orf177Q52M58 125 aa8.52□□□□□ -1.05
VAMP7-201ENST00000262640 Q6ZRN7 208 aaPredicted RBP8.52□□□□□ -1.05
VAMP7-201ENST00000262640 PGPEP1Q9NXJ5 209 aa8.52□□□□□ -1.05
VAMP7-201ENST00000262640 H3BUT2 72 aa8.52□□□□□ -1.05
VAMP7-201ENST00000262640 WFDC2Q14508 124 aa8.51□□□□□ -1.05
VAMP7-201ENST00000262640 NDUFC2-KCTD14E9PQ53 114 aa8.51□□□□□ -1.05
VAMP7-201ENST00000262640 ALMS1Q8TCU4 4167 aa8.5□□□□□ -1.05
VAMP7-201ENST00000262640 TSPAN13O95857 204 aa8.5□□□□□ -1.05
VAMP7-201ENST00000262640 SLPIP03973 132 aa8.5□□□□□ -1.05
VAMP7-201ENST00000262640 NAA38Q9BRA0 125 aaKnown RBP8.5□□□□□ -1.05
VAMP7-201ENST00000262640 DNAH10Q8IVF4 4471 aa8.49□□□□□ -1.05
VAMP7-201ENST00000262640 A0A1W2PPM0 123 aa8.48□□□□□ -1.05
VAMP7-201ENST00000262640 NDUFC2O95298 119 aa8.48□□□□□ -1.05
VAMP7-201ENST00000262640 DNAH6Q9C0G6 4158 aa8.48□□□□□ -1.05
VAMP7-201ENST00000262640 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
VAMP7-201ENST00000262640 LRCOL1A6NCL2 159 aa8.48□□□□□ -1.05
VAMP7-201ENST00000262640 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
VAMP7-201ENST00000262640 RPL13AP40429 203 aaKnown RBP8.48□□□□□ -1.05
VAMP7-201ENST00000262640 CNBPP62633 177 aaKnown RBP8.47□□□□□ -1.05
VAMP7-201ENST00000262640 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms