RNA–Protein interactions for RNA: ENST00000262426.5

FOXF1-201, Transcript of forkhead box F1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXF1, Length 3,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1-201ENST00000262426 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
FOXF1-201ENST00000262426 PRB2P02812 416 aaPredicted RBP10.21□□□□□ -0.77
FOXF1-201ENST00000262426 X6R8D5 127 aa10.21□□□□□ -0.77
FOXF1-201ENST00000262426 A0A0U1RQV1 116 aa10.21□□□□□ -0.78
FOXF1-201ENST00000262426 TMEM141Q96I45 108 aa10.21□□□□□ -0.78
FOXF1-201ENST00000262426 C2orf48Q96LS8 159 aa10.2□□□□□ -0.78
FOXF1-201ENST00000262426 CHCHD7Q9BUK0 85 aa10.2□□□□□ -0.78
FOXF1-201ENST00000262426 IGHV4-30-4P0DP06 118 aa10.2□□□□□ -0.78
FOXF1-201ENST00000262426 C9orf129Q5T035 196 aaKnown RBP10.2□□□□□ -0.78
FOXF1-201ENST00000262426 LITAFQ99732 161 aa10.2□□□□□ -0.78
FOXF1-201ENST00000262426 IGLV4-3A0A075B6K6 122 aa10.2□□□□□ -0.78
FOXF1-201ENST00000262426 K7EQD1 137 aa10.2□□□□□ -0.78
FOXF1-201ENST00000262426 FAM104AQ969W3 186 aa10.2□□□□□ -0.78
FOXF1-201ENST00000262426 KRTAP10-11P60412 298 aa10.19□□□□□ -0.78
FOXF1-201ENST00000262426 NTM-AS1Q6ZSK4 140 aa10.19□□□□□ -0.78
FOXF1-201ENST00000262426 CMYA5Q8N3K9 4069 aa10.19□□□□□ -0.78
FOXF1-201ENST00000262426 FAM240AA0A1B0GVK7 77 aa10.19□□□□□ -0.78
FOXF1-201ENST00000262426 FAM218AQ96MZ4 157 aa10.19□□□□□ -0.78
FOXF1-201ENST00000262426 TIMM17AQ99595 171 aa10.19□□□□□ -0.78
FOXF1-201ENST00000262426 FAM222AQ5U5X8 452 aa10.18□□□□□ -0.78
FOXF1-201ENST00000262426 DNAL4O96015 105 aa10.17□□□□□ -0.78
FOXF1-201ENST00000262426 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
FOXF1-201ENST00000262426 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
FOXF1-201ENST00000262426 RETNQ9HD89 108 aa10.17□□□□□ -0.78
FOXF1-201ENST00000262426 MIAQ16674 131 aa10.17□□□□□ -0.78
FOXF1-201ENST00000262426 PIK3CD-AS1Q5SR53 167 aa10.17□□□□□ -0.78
FOXF1-201ENST00000262426 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
FOXF1-201ENST00000262426 ATP5G1P05496 136 aa10.16□□□□□ -0.78
FOXF1-201ENST00000262426 HTN3P15516 51 aa10.16□□□□□ -0.78
FOXF1-201ENST00000262426 TRAV23DV6A0A075B6W5 121 aa10.16□□□□□ -0.78
FOXF1-201ENST00000262426 IGKV3OR2-268A0A0C4DH90 116 aa10.16□□□□□ -0.78
FOXF1-201ENST00000262426 FHL2Q14192 279 aa10.16□□□□□ -0.78
FOXF1-201ENST00000262426 SLPIP03973 132 aa10.15□□□□□ -0.78
FOXF1-201ENST00000262426 OVOL2Q9BRP0 275 aa10.15□□□□□ -0.78
FOXF1-201ENST00000262426 CELA1Q9UNI1 258 aa10.15□□□□□ -0.78
FOXF1-201ENST00000262426 UBE2D4Q9Y2X8 147 aa10.15□□□□□ -0.78
FOXF1-201ENST00000262426 DGAT2L7PQ6IED9 249 aa10.15□□□□□ -0.78
FOXF1-201ENST00000262426 IGHV4-28A0A0C4DH34 117 aa10.15□□□□□ -0.79
FOXF1-201ENST00000262426 ATOX1O00244 68 aa10.15□□□□□ -0.79
FOXF1-201ENST00000262426 Q5XG85 94 aa10.15□□□□□ -0.79
FOXF1-201ENST00000262426 CRYGAP11844 174 aa10.14□□□□□ -0.79
FOXF1-201ENST00000262426 LINC00336Q6ZUF6 198 aa10.13□□□□□ -0.79
FOXF1-201ENST00000262426 Q9H8V8 135 aa10.13□□□□□ -0.79
FOXF1-201ENST00000262426 C20orf197Q8N268 126 aa10.13□□□□□ -0.79
FOXF1-201ENST00000262426 CDKN2A-AS1Q9UH64 79 aa10.13□□□□□ -0.79
FOXF1-201ENST00000262426 NCR3O14931 201 aa10.12□□□□□ -0.79
FOXF1-201ENST00000262426 RPL18AQ02543 176 aaKnown RBP10.12□□□□□ -0.79
FOXF1-201ENST00000262426 IMUPQ9GZP8 106 aa10.12□□□□□ -0.79
FOXF1-201ENST00000262426 USP17L23D6RBM5 183 aa10.12□□□□□ -0.79
FOXF1-201ENST00000262426 LINC00846Q9NV44 126 aa10.12□□□□□ -0.79
FOXF1-201ENST00000262426 IGHV1-58A0A0C4DH39 117 aa10.11□□□□□ -0.79
FOXF1-201ENST00000262426 GYPEP15421 78 aa10.11□□□□□ -0.79
FOXF1-201ENST00000262426 APOC4P55056 127 aa10.11□□□□□ -0.79
FOXF1-201ENST00000262426 ACYP1P07311 99 aa10.11□□□□□ -0.79
FOXF1-201ENST00000262426 PFN2P35080 140 aa10.11□□□□□ -0.79
FOXF1-201ENST00000262426 COX7A2LO14548 114 aa10.1□□□□□ -0.79
FOXF1-201ENST00000262426 VSIG2Q96IQ7 327 aa10.1□□□□□ -0.79
FOXF1-201ENST00000262426 DEFB121Q5J5C9 76 aa10.09□□□□□ -0.79
FOXF1-201ENST00000262426 SOSTDC1Q6X4U4 206 aa10.09□□□□□ -0.79
FOXF1-201ENST00000262426 C5orf38Q86SI9 138 aa10.09□□□□□ -0.79
FOXF1-201ENST00000262426 TRBV10-1A0A0K0K1A3 114 aa10.09□□□□□ -0.79
FOXF1-201ENST00000262426 COX6A2Q02221 97 aa10.09□□□□□ -0.79
FOXF1-201ENST00000262426 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
FOXF1-201ENST00000262426 TRBV6-4A0A1B0GX49 114 aa10.08□□□□□ -0.8
FOXF1-201ENST00000262426 TMEM258P61165 79 aa10.08□□□□□ -0.8
FOXF1-201ENST00000262426 SERP2Q8N6R1 65 aa10.08□□□□□ -0.8
FOXF1-201ENST00000262426 LINC00308Q8TCZ7 52 aa10.08□□□□□ -0.8
FOXF1-201ENST00000262426 LINC01561Q8N1V8 128 aa10.08□□□□□ -0.8
FOXF1-201ENST00000262426 UBE2L6O14933 153 aa10.07□□□□□ -0.8
FOXF1-201ENST00000262426 DAD1P61803 113 aa10.07□□□□□ -0.8
FOXF1-201ENST00000262426 Q8NAQ8 132 aa10.07□□□□□ -0.8
FOXF1-201ENST00000262426 GHRHP01286 108 aa10.07□□□□□ -0.8
FOXF1-201ENST00000262426 Q8N3U1 123 aa10.07□□□□□ -0.8
FOXF1-201ENST00000262426 MDFIQ99750 246 aa10.07□□□□□ -0.8
FOXF1-201ENST00000262426 IGLV4-60A0A075B6I1 120 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 A0A087WYN8 130 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 WIPF1O43516 503 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 CLPSL2Q6UWE3 100 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 FAM19A1Q7Z5A9 133 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 TOMM7Q9P0U1 55 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 SNURFQ9Y675 71 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 MALP21145 153 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 C22orf24Q9Y442 160 aa10.06□□□□□ -0.8
FOXF1-201ENST00000262426 FAM236DA0A1B0GTK5 79 aa10.05□□□□□ -0.8
FOXF1-201ENST00000262426 FAM236CP0DP71 79 aa10.05□□□□□ -0.8
FOXF1-201ENST00000262426 BRK1Q8WUW1 75 aa10.05□□□□□ -0.8
FOXF1-201ENST00000262426 SPANXDQ9BXN6 97 aa10.05□□□□□ -0.8
FOXF1-201ENST00000262426 SPANXCQ9NY87 97 aa10.05□□□□□ -0.8
FOXF1-201ENST00000262426 PAX4O43316 350 aa10.05□□□□□ -0.8
FOXF1-201ENST00000262426 MRAPQ8TCY5 172 aa10.05□□□□□ -0.8
FOXF1-201ENST00000262426 RPS28P62857 69 aaKnown RBP10.04□□□□□ -0.8
FOXF1-201ENST00000262426 C11orf68Q9H3H3 251 aaKnown RBP10.04□□□□□ -0.8
FOXF1-201ENST00000262426 TRBV6-8A0A0A6YYG3 113 aa10.03□□□□□ -0.8
FOXF1-201ENST00000262426 MRPS36P82909 103 aaKnown RBP10.03□□□□□ -0.8
FOXF1-201ENST00000262426 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
FOXF1-201ENST00000262426 LECT2O14960 151 aa10.03□□□□□ -0.8
FOXF1-201ENST00000262426 CXCL5P42830 114 aa10.03□□□□□ -0.8
FOXF1-201ENST00000262426 ENHOQ6UWT2 76 aa10.03□□□□□ -0.8
FOXF1-201ENST00000262426 INAFM2P0DMQ5 153 aa10.02□□□□□ -0.8
FOXF1-201ENST00000262426 LINC00612Q8N6U2 182 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms