RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 PRR3P79522 188 aaKnown RBP12.57□□□□□ -0.4
TRAF4-201ENST00000262395 DNAJC9-AS1A6NH13 148 aa12.56□□□□□ -0.4
TRAF4-201ENST00000262395 C6orf226Q5I0X4 101 aa12.56□□□□□ -0.4
TRAF4-201ENST00000262395 A0A087WVE0 104 aa12.55□□□□□ -0.4
TRAF4-201ENST00000262395 TRAV25A0A0B4J276 109 aa12.55□□□□□ -0.4
TRAF4-201ENST00000262395 LRRC75A-AS1Q8N1F1 130 aa12.55□□□□□ -0.4
TRAF4-201ENST00000262395 C16orf74Q96GX8 76 aa12.55□□□□□ -0.4
TRAF4-201ENST00000262395 LINC00846Q9NV44 126 aa12.55□□□□□ -0.4
TRAF4-201ENST00000262395 ESM1Q9NQ30 184 aa12.55□□□□□ -0.4
TRAF4-201ENST00000262395 TRBV6-4A0A1B0GX49 114 aa12.54□□□□□ -0.4
TRAF4-201ENST00000262395 FHL2Q14192 279 aa12.54□□□□□ -0.4
TRAF4-201ENST00000262395 DEFB113Q30KQ7 82 aa12.54□□□□□ -0.4
TRAF4-201ENST00000262395 KIR2DL5BQ8NHK3 375 aa12.53□□□□□ -0.4
TRAF4-201ENST00000262395 C2orf48Q96LS8 159 aa12.53□□□□□ -0.4
TRAF4-201ENST00000262395 A0A087WZ39 114 aa12.52□□□□□ -0.41
TRAF4-201ENST00000262395 LINC00959A0A1B0GUT2 108 aa12.51□□□□□ -0.41
TRAF4-201ENST00000262395 A0A1B0GX51 115 aa12.51□□□□□ -0.41
TRAF4-201ENST00000262395 IBA57-AS1B1ANH7 110 aa12.51□□□□□ -0.41
TRAF4-201ENST00000262395 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
TRAF4-201ENST00000262395 H0YGX0 51 aa12.5□□□□□ -0.41
TRAF4-201ENST00000262395 CXCL5P42830 114 aa12.5□□□□□ -0.41
TRAF4-201ENST00000262395 ATOX1O00244 68 aa12.5□□□□□ -0.41
TRAF4-201ENST00000262395 CRYGAP11844 174 aa12.5□□□□□ -0.41
TRAF4-201ENST00000262395 RNASE1P07998 156 aaKnown RBP12.49□□□□□ -0.41
TRAF4-201ENST00000262395 UBR5O95071 2799 aaPredicted RBP12.49□□□□□ -0.41
TRAF4-201ENST00000262395 CSNK1G2-AS1Q8NCQ2 148 aa12.48□□□□□ -0.41
TRAF4-201ENST00000262395 DSCR8Q96T75 97 aa12.48□□□□□ -0.41
TRAF4-201ENST00000262395 WFDC11Q8NEX6 87 aa12.48□□□□□ -0.41
TRAF4-201ENST00000262395 OVOL2Q9BRP0 275 aa12.48□□□□□ -0.41
TRAF4-201ENST00000262395 C19orf73Q9NVV2 129 aa12.47□□□□□ -0.41
TRAF4-201ENST00000262395 GYPEP15421 78 aa12.47□□□□□ -0.41
TRAF4-201ENST00000262395 BBC3Q96PG8 261 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-201ENST00000262395 IGLV10-54A0A075B6I4 117 aa12.46□□□□□ -0.42
TRAF4-201ENST00000262395 WFDC9Q8NEX5 89 aa12.46□□□□□ -0.42
TRAF4-201ENST00000262395 C9orf116Q5BN46 136 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-201ENST00000262395 Q8N3U1 123 aa12.45□□□□□ -0.42
TRAF4-201ENST00000262395 RPL18AQ02543 176 aaKnown RBP12.44□□□□□ -0.42
TRAF4-201ENST00000262395 HIST1H4AP62805 103 aaKnown RBP12.44□□□□□ -0.42
TRAF4-201ENST00000262395 SS18Q15532 418 aa12.44□□□□□ -0.42
TRAF4-201ENST00000262395 KRTAP1-3Q8IUG1 177 aa12.44□□□□□ -0.42
TRAF4-201ENST00000262395 ORMDL1Q9P0S3 153 aa12.44□□□□□ -0.42
TRAF4-201ENST00000262395 LINC01006Q8NI28 216 aa12.44□□□□□ -0.42
TRAF4-201ENST00000262395 DPH3Q96FX2 82 aa12.43□□□□□ -0.42
TRAF4-201ENST00000262395 OBSCN-AS1Q96MR7 158 aa12.43□□□□□ -0.42
TRAF4-201ENST00000262395 LINC01561Q8N1V8 128 aa12.42□□□□□ -0.42
TRAF4-201ENST00000262395 IGLV1-51P01701 117 aa12.41□□□□□ -0.42
TRAF4-201ENST00000262395 RPS28P62857 69 aaKnown RBP12.41□□□□□ -0.42
TRAF4-201ENST00000262395 HILS1P60008 231 aa12.41□□□□□ -0.42
TRAF4-201ENST00000262395 C4orf26Q17RF5 130 aa12.41□□□□□ -0.42
TRAF4-201ENST00000262395 TMEM86BQ8N661 226 aa12.41□□□□□ -0.42
TRAF4-201ENST00000262395 DEFB4AO15263 64 aa12.41□□□□□ -0.42
TRAF4-201ENST00000262395 NANOS2P60321 138 aaKnown RBP12.4□□□□□ -0.42
TRAF4-201ENST00000262395 OXTP01178 125 aa12.4□□□□□ -0.42
TRAF4-201ENST00000262395 Q6JHZ5 121 aa12.4□□□□□ -0.42
TRAF4-201ENST00000262395 LINC00269Q8N2A0 174 aa12.39□□□□□ -0.43
TRAF4-201ENST00000262395 SERP2Q8N6R1 65 aa12.39□□□□□ -0.43
TRAF4-201ENST00000262395 HRCT1Q6UXD1 115 aa12.38□□□□□ -0.43
TRAF4-201ENST00000262395 LY6G6DO95868 133 aa12.38□□□□□ -0.43
TRAF4-201ENST00000262395 TMEM258P61165 79 aa12.38□□□□□ -0.43
TRAF4-201ENST00000262395 VWFP04275 2813 aa12.37□□□□□ -0.43
TRAF4-201ENST00000262395 USP17L23D6RBM5 183 aa12.37□□□□□ -0.43
TRAF4-201ENST00000262395 Q8NDZ9 215 aa12.37□□□□□ -0.43
TRAF4-201ENST00000262395 Q8N814 137 aa12.37□□□□□ -0.43
TRAF4-201ENST00000262395 Q8IZM0 81 aa12.36□□□□□ -0.43
TRAF4-201ENST00000262395 CCKP06307 115 aa12.36□□□□□ -0.43
TRAF4-201ENST00000262395 CMC4P56277 68 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-201ENST00000262395 C6orf99Q4VX62 202 aa12.34□□□□□ -0.43
TRAF4-201ENST00000262395 FAM19A1Q7Z5A9 133 aa12.34□□□□□ -0.43
TRAF4-201ENST00000262395 ANGP03950 147 aaKnown RBP12.34□□□□□ -0.43
TRAF4-201ENST00000262395 UPK3BQ9BT76 320 aa12.34□□□□□ -0.43
TRAF4-201ENST00000262395 HIVEP2P31629 2446 aa12.33□□□□□ -0.44
TRAF4-201ENST00000262395 TRAV23DV6A0A075B6W5 121 aa12.33□□□□□ -0.44
TRAF4-201ENST00000262395 CHCHD10Q8WYQ3 142 aaPredicted RBP12.32□□□□□ -0.44
TRAF4-201ENST00000262395 KIAA0087Q14695 138 aa12.32□□□□□ -0.44
TRAF4-201ENST00000262395 ENHOQ6UWT2 76 aa12.32□□□□□ -0.44
TRAF4-201ENST00000262395 C6orf223Q8N319 242 aa12.32□□□□□ -0.44
TRAF4-201ENST00000262395 LINC00482Q8N8I6 264 aa12.31□□□□□ -0.44
TRAF4-201ENST00000262395 ITPR2Q14571 2701 aa12.31□□□□□ -0.44
TRAF4-201ENST00000262395 ZNF843Q8N446 348 aa12.3□□□□□ -0.44
TRAF4-201ENST00000262395 A0A1B0GUV1 79 aa12.3□□□□□ -0.44
TRAF4-201ENST00000262395 PRO0255Q9UI72 69 aa12.3□□□□□ -0.44
TRAF4-201ENST00000262395 S100A7L2Q5SY68 101 aa12.29□□□□□ -0.44
TRAF4-201ENST00000262395 C10orf25Q5T742 122 aa12.29□□□□□ -0.44
TRAF4-201ENST00000262395 X6R8D5 127 aa12.28□□□□□ -0.44
TRAF4-201ENST00000262395 TMEM256-PLSCR3K7ERE1 68 aa12.28□□□□□ -0.44
TRAF4-201ENST00000262395 SPATA3Q8NHX4 192 aa12.28□□□□□ -0.44
TRAF4-201ENST00000262395 REG3AQ06141 175 aa12.27□□□□□ -0.44
TRAF4-201ENST00000262395 JMJD7-PLA2G4BH0Y9G9 81 aa12.27□□□□□ -0.45
TRAF4-201ENST00000262395 UNQ6190/PRO20217Q6UXQ8 127 aa12.27□□□□□ -0.45
TRAF4-201ENST00000262395 M0R2N4 97 aa12.27□□□□□ -0.45
TRAF4-201ENST00000262395 CD164L2Q6UWJ8 174 aa12.27□□□□□ -0.45
TRAF4-201ENST00000262395 LINC00167Q96N53 147 aa12.27□□□□□ -0.45
TRAF4-201ENST00000262395 GHRHP01286 108 aa12.26□□□□□ -0.45
TRAF4-201ENST00000262395 Q5XG85 94 aa12.26□□□□□ -0.45
TRAF4-201ENST00000262395 WIPF1O43516 503 aa12.26□□□□□ -0.45
TRAF4-201ENST00000262395 TENM4Q6N022 2769 aa12.26□□□□□ -0.45
TRAF4-201ENST00000262395 HTN3P15516 51 aa12.25□□□□□ -0.45
TRAF4-201ENST00000262395 DEFB135Q30KP9 77 aa12.25□□□□□ -0.45
TRAF4-201ENST00000262395 LAMTOR3Q9UHA4 124 aa12.24□□□□□ -0.45
TRAF4-201ENST00000262395 C20orf197Q8N268 126 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms